EY659795

Overview
NameEY659795
Unique NameEY659795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_ASPNG (Histone H2A OS=Aspergillus niger GN=httA PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.014e-32
Identity = 72/111 (64.86%), Postives = 79/111 (71.17%), Query Frame = 2
Query:  164 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK-GKG 493
            SRS KAGL FPVGR+ R L+ G YA+RVGAGAP                  GNAARDNK  RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK  K GKG
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKG 128          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_ASPNC (Histone H2A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=httA PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.014e-32
Identity = 72/111 (64.86%), Postives = 79/111 (71.17%), Query Frame = 2
Query:  164 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK-GKG 493
            SRS KAGL FPVGR+ R L+ G YA+RVGAGAP                  GNAARDNK  RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK  K GKG
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKG 128          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_ASPFU (Histone H2A OS=Aspergillus fumigatus GN=hta1 PE=3 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 2.014e-32
Identity = 72/111 (64.86%), Postives = 79/111 (71.17%), Query Frame = 2
Query:  164 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK-GKG 493
            SRS KAGL FPVGR+ R L+ G YA+RVGAGAP                  GNAARDNK  RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK  K GKG
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKG 128          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_ASPCL (Histone H2A OS=Aspergillus clavatus GN=hta1 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.014e-32
Identity = 72/111 (64.86%), Postives = 79/111 (71.17%), Query Frame = 2
Query:  164 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK-GKG 493
            SRS KAGL FPVGR+ R L+ G YA+RVGAGAP                  GNAARDNK  RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK  K GKG
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKG 128          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_AGABI (Histone H2A OS=Agaricus bisporus PE=2 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 3.435e-32
Identity = 74/122 (60.66%), Postives = 84/122 (68.85%), Query Frame = 2
Query:  152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 517
            +KS+SRS KAGLQFPVGR+ R LK G YA+RVGAGAP                  GNAARDNK  RIVPRH+QLA+RNDEEL KLLG+V I+ GGV+P+I   LLP K  KGK D G  SQE
Sbjct:   18 TKSMSRSSKAGLQFPVGRVHRLLKKGNYAQRVGAGAPVYMAAVLEYLAAEILELAGNAARDNKKQRIVPRHLQLAIRNDEELHKLLGNVVISQGGVVPHIAPELLPSKSSKGKKDEG-VSQE 138          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A2_PICST (Histone H2A.2 OS=Pichia stipitis GN=HTA2 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.435e-32
Identity = 73/120 (60.83%), Postives = 83/120 (69.17%), Query Frame = 2
Query:  158 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 517
            S SRS KAGL FPVGR+ R L+ G YA+RVG+GAP                  GNAARDNK +RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ+LLP K    K   G ASQE
Sbjct:   15 STSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQSLLPAK----KAKPGKASQE 130          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A6_ORYSJ (Probable histone H2A.6 OS=Oryza sativa subsp. japonica GN=Os05g0113900 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 4.486e-32
Identity = 71/121 (58.68%), Postives = 82/121 (67.77%), Query Frame = 2
Query:  155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 517
            K VSRS KAGLQFPVGRI R+LK G+YA+RVG GAP                  GNAARDNK NRI+PRH+ LA+RNDEEL KLL  VTIA+GGVLPNI+  LLPKK  +       AS++
Sbjct:   24 KPVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEKADKPAKASKD 144          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A6_ORYSI (Probable histone H2A.6 OS=Oryza sativa subsp. indica GN=OsI_017523 PE=3 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 4.486e-32
Identity = 71/121 (58.68%), Postives = 82/121 (67.77%), Query Frame = 2
Query:  155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 517
            K VSRS KAGLQFPVGRI R+LK G+YA+RVG GAP                  GNAARDNK NRI+PRH+ LA+RNDEEL KLL  VTIA+GGVLPNI+  LLPKK  +       AS++
Sbjct:   24 KPVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEKADKPAKASKD 144          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_PARAN (Histone H2A, gonadal OS=Parechinus angulosus PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 5.859e-32
Identity = 69/109 (63.30%), Postives = 77/109 (70.64%), Query Frame = 2
Query:  155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVG 481
            K+ SRS +AGLQFPVGR+ RFL+ G YA RVGAGAP                  GNAARDNK  RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI   LLPKK G
Sbjct:   13 KAKSRSSRAGLQFPVGRVHRFLRKGNYANRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTG 121          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_MAIZE (Histone H2A OS=Zea mays PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.859e-32
Identity = 71/117 (60.68%), Postives = 80/117 (68.38%), Query Frame = 2
Query:  155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGS 505
            KSVSRS KAGLQFPVGRI R+LK G+YA+ VG GAP                  GNAARDNK  RI+PRH+ LA+RNDEEL KLLG VTIA+GGVLPNI+  LLPKK  +     GS
Sbjct:   27 KSVSRSVKAGLQFPVGRIGRYLKKGRYAQXVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLGGVTIAHGGVLPNINPVLLPKKTAEKASSGGS 143          
The following BLAST results are available for this feature:
BLAST of EY659795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
H2A_ASPNG2.014e-3264.86Histone H2A OS=Aspergillus niger GN=httA PE=2 SV=1[more]
H2A_ASPNC2.014e-3264.86Histone H2A OS=Aspergillus niger (strain CBS 513.8... [more]
H2A_ASPFU2.014e-3264.86Histone H2A OS=Aspergillus fumigatus GN=hta1 PE=3 ... [more]
H2A_ASPCL2.014e-3264.86Histone H2A OS=Aspergillus clavatus GN=hta1 PE=3 S... [more]
H2A_AGABI3.435e-3260.66Histone H2A OS=Agaricus bisporus PE=2 SV=3[more]
H2A2_PICST3.435e-3260.83Histone H2A.2 OS=Pichia stipitis GN=HTA2 PE=3 SV=1[more]
H2A6_ORYSJ4.486e-3258.68Probable histone H2A.6 OS=Oryza sativa subsp. japo... [more]
H2A6_ORYSI4.486e-3258.68Probable histone H2A.6 OS=Oryza sativa subsp. indi... [more]
H2A_PARAN5.859e-3263.30Histone H2A, gonadal OS=Parechinus angulosus PE=1 ... [more]
H2A_MAIZE5.859e-3260.68Histone H2A OS=Zea mays PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-B08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659795 ID=EY659795; Name=EY659795; organism=Citrus sinensis; type=EST; length=572bp
TTCAGTAGCGGACGCGTCCGCACCGATCTTCCTAAAAAAGGGACTTTCAA
TCGCTTCAAACCAAACCGAAATCTAAGGTTAGGTTTTCTCTGTAATAAGA
ATGAGTTCAACTGGAGGGTCAACGAAGGGCGGCAGGGGTAAGCCGAAGGC
TTCGAAATCGGTCTCGCGGTCGCATAAGGCGGGCCTTCAGTTCCCGGTGG
GCAGGATCGCTAGGTTTTTGAAGGCCGGAAAGTACGCTGAGCGAGTCGGC
GCCGGAGCTCCTGTTTACCTCTCTGCCGTGCTTGAGTACCTCGCTGCTGA
GGTTCTGGAGCTTGCTGGCAATGCAGCAAGGGACAACAAGAACAACCGTA
TAGTGCCAAGGCATATTCAGCTTGCAGTTCGAAATGATGAGGAATTGAGC
AAGCTGCTGGGCTCGGTTACCATTGCCAATGGAGGTGTTTTACCCAACAT
TCACCAGACGCTGCTTCCCAAGAAGGTGGGGAAAGGAAAGGGTGACATTG
GTTCTGCTTCTCAAGAGTTCTAGACTCTGCTCTGTCAGAATTTTACTAGT
ATCTGTAAAAAAAAAAAAAAAA
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