EY659795
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A4_ORYSI (Probable histone H2A.4 OS=Oryza sativa subsp. indica GN=OsI_019561 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.653e-32 Identity = 68/109 (62.39%), Postives = 78/109 (71.56%), Query Frame = 2 Query: 155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVG 481 K VSRS KAGLQFPVGRI R+LK G+Y++R+G GAP GNAARDNK NRI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLPKK G Sbjct: 25 KPVSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTG 133
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_SIPNU (Histone H2A OS=Sipunculus nudus PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 9.995e-32 Identity = 70/112 (62.50%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 490 KS SRS +AGLQFPVGRI R L+ G YAER+GAGAP GNAARDNK RI+PRH+QLA+RNDEEL+KLL VTIA GGVLPNI LLPKK K K Sbjct: 13 KSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTQKSK 124
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_ACRFO (Histone H2A OS=Acropora formosa PE=3 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 9.995e-32 Identity = 71/113 (62.83%), Postives = 79/113 (69.91%), Query Frame = 2 Query: 146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 484 + +KS SRS +AGLQFPVGRI R L+ G YAERVGAGAP GNAARDNK +RI+PRH+QLAVRNDEEL+KLL VTIA GGVLPNI LLPKK K Sbjct: 10 QGTKSKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTEK 122
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A1_MEDTR (Probable histone H2A.1 OS=Medicago truncatula GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 9.995e-32 Identity = 72/120 (60.00%), Postives = 82/120 (68.33%), Query Frame = 2 Query: 155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQ 514 KSV+RS +AGLQFPVGRI R+LK G+YA+RVG GAP GNAARDNK NRI+PRH+ LAVRNDEEL KLL VTIA+GGVLPNI+ LLPKK K S S+ Sbjct: 21 KSVTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNEKAATTTKSPSK 140
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.305e-31 Identity = 69/107 (64.49%), Postives = 78/107 (72.90%), Query Frame = 2 Query: 155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 475 KSV+RS +AGLQFPVGRI R+LK G+YA+RVG GAP GNAARDNK NRI+PRH+ LAVRNDEEL KLL VTIA+GGVLPNI+ LLPKK Sbjct: 22 KSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 128
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_STRPU (Histone H2A, embryonic OS=Strongylocentrotus purpuratus PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 1.705e-31 Identity = 68/111 (61.26%), Postives = 79/111 (71.17%), Query Frame = 2 Query: 152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 484 +K+ +RS +AGLQFPVGR+ RFL+ G YA+RVG GAP GNAARDNK +RI+PRH+QLAVRNDEEL+KLLG VTIA GGVLPNI LLPKK K Sbjct: 12 TKAKTRSSRAGLQFPVGRVHRFLRKGNYAKRVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTAK 122
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_PLADU (Histone H2A OS=Platynereis dumerilii PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 1.705e-31 Identity = 70/112 (62.50%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 490 KS +RS +AGLQFPVGRI R L+ G YAERVGAGAP GNAARDNK RI+PRH+QLA+RNDEEL+KLL VTIA GGVLPNI LLPKK K K Sbjct: 13 KSKTRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTTKAK 124
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_CAIMO (Histone H2A OS=Cairina moschata PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 1.705e-31 Identity = 69/113 (61.06%), Postives = 78/113 (69.03%), Query Frame = 2 Query: 152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 490 +K+ SRS +AGLQFPVGR+ R L+ G YAERVGAGAP GNAARDNK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK K Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTDSHK 125
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2AX_XENLA (Histone H2A.x OS=Xenopus laevis GN=h2afx PE=1 SV=3) HSP 1 Score: 135.576 bits (340), Expect = 1.705e-31 Identity = 70/122 (57.38%), Postives = 81/122 (66.39%), Query Frame = 2 Query: 152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 517 +K+ +RS +AGLQFPVGR+ R L+ G YA RVGAGAP GNAARDNK +RI+PRH+QLAVRNDEEL+KLLG VTIA GGVLPNI LLPKK G G S + Sbjct: 13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAHRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKSSGGVSTSGKKSSQ 134
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2AL_STRPU (Late histone H2A.L3 OS=Strongylocentrotus purpuratus PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 1.705e-31 Identity = 69/111 (62.16%), Postives = 78/111 (70.27%), Query Frame = 2 Query: 152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 484 +K+ SRS +AGLQFPVGR+ RFL+ G YA+RVGAGAP GNAARDNK RI+PRH+QLAVRNDEEL+KLL VTIA GGVLPNI LLPKK K Sbjct: 13 AKAKSRSARAGLQFPVGRVHRFLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTSK 123 The following BLAST results are available for this feature:
BLAST of EY659795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659795 ID=EY659795; Name=EY659795; organism=Citrus sinensis; type=EST; length=572bpback to top |