EY659785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BURP8 (30S ribosomal protein S5 OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=rpsE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.103e-11 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 362 LKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSV--IPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 L+++++ V K + G+ F A VVGD DG VG+G +KEV A++ A+ A+ ++ +P++ G T+ +V GK G+ TV + PA G G++A + V G+ +V S GST N V+A + L K Sbjct: 17 LREKMISVNRVTKVVKGGRILGFAALTVVGDGDGRVGMGKGKAKEVPVAVQKAMEQARRNMFKVPLKNG----------TLQHEVHGKHGASTVLLAPAKDGTGVIAGGPMRAVFDVMGVQNVVAKSHGSTNPY-NLVRATLDGLRK 152
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BURP6 (30S ribosomal protein S5 OS=Burkholderia pseudomallei (strain 668) GN=rpsE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.103e-11 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 362 LKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSV--IPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 L+++++ V K + G+ F A VVGD DG VG+G +KEV A++ A+ A+ ++ +P++ G T+ +V GK G+ TV + PA G G++A + V G+ +V S GST N V+A + L K Sbjct: 17 LREKMISVNRVTKVVKGGRILGFAALTVVGDGDGRVGMGKGKAKEVPVAVQKAMEQARRNMFKVPLKNG----------TLQHEVHGKHGASTVLLAPAKDGTGVIAGGPMRAVFDVMGVQNVVAKSHGSTNPY-NLVRATLDGLRK 152
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BURP1 (30S ribosomal protein S5 OS=Burkholderia pseudomallei (strain 1710b) GN=rpsE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.103e-11 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 362 LKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSV--IPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 L+++++ V K + G+ F A VVGD DG VG+G +KEV A++ A+ A+ ++ +P++ G T+ +V GK G+ TV + PA G G++A + V G+ +V S GST N V+A + L K Sbjct: 17 LREKMISVNRVTKVVKGGRILGFAALTVVGDGDGRVGMGKGKAKEVPVAVQKAMEQARRNMFKVPLKNG----------TLQHEVHGKHGASTVLLAPAKDGTGVIAGGPMRAVFDVMGVQNVVAKSHGSTNPY-NLVRATLDGLRK 152
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BURP0 (30S ribosomal protein S5 OS=Burkholderia pseudomallei (strain 1106a) GN=rpsE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.103e-11 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 362 LKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSV--IPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 L+++++ V K + G+ F A VVGD DG VG+G +KEV A++ A+ A+ ++ +P++ G T+ +V GK G+ TV + PA G G++A + V G+ +V S GST N V+A + L K Sbjct: 17 LREKMISVNRVTKVVKGGRILGFAALTVVGDGDGRVGMGKGKAKEVPVAVQKAMEQARRNMFKVPLKNG----------TLQHEVHGKHGASTVLLAPAKDGTGVIAGGPMRAVFDVMGVQNVVAKSHGSTNPY-NLVRATLDGLRK 152
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BURMS (30S ribosomal protein S5 OS=Burkholderia mallei (strain SAVP1) GN=rpsE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.103e-11 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 362 LKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSV--IPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 L+++++ V K + G+ F A VVGD DG VG+G +KEV A++ A+ A+ ++ +P++ G T+ +V GK G+ TV + PA G G++A + V G+ +V S GST N V+A + L K Sbjct: 17 LREKMISVNRVTKVVKGGRILGFAALTVVGDGDGRVGMGKGKAKEVPVAVQKAMEQARRNMFKVPLKNG----------TLQHEVHGKHGASTVLLAPAKDGTGVIAGGPMRAVFDVMGVQNVVAKSHGSTNPY-NLVRATLDGLRK 152
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BURMA (30S ribosomal protein S5 OS=Burkholderia mallei GN=rpsE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.103e-11 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 362 LKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSV--IPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 L+++++ V K + G+ F A VVGD DG VG+G +KEV A++ A+ A+ ++ +P++ G T+ +V GK G+ TV + PA G G++A + V G+ +V S GST N V+A + L K Sbjct: 17 LREKMISVNRVTKVVKGGRILGFAALTVVGDGDGRVGMGKGKAKEVPVAVQKAMEQARRNMFKVPLKNG----------TLQHEVHGKHGASTVLLAPAKDGTGVIAGGPMRAVFDVMGVQNVVAKSHGSTNPY-NLVRATLDGLRK 152
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BURM9 (30S ribosomal protein S5 OS=Burkholderia mallei (strain NCTC 10229) GN=rpsE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.103e-11 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 362 LKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSV--IPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 L+++++ V K + G+ F A VVGD DG VG+G +KEV A++ A+ A+ ++ +P++ G T+ +V GK G+ TV + PA G G++A + V G+ +V S GST N V+A + L K Sbjct: 17 LREKMISVNRVTKVVKGGRILGFAALTVVGDGDGRVGMGKGKAKEVPVAVQKAMEQARRNMFKVPLKNG----------TLQHEVHGKHGASTVLLAPAKDGTGVIAGGPMRAVFDVMGVQNVVAKSHGSTNPY-NLVRATLDGLRK 152
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BURM7 (30S ribosomal protein S5 OS=Burkholderia mallei (strain NCTC 10247) GN=rpsE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.103e-11 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 362 LKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSV--IPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 L+++++ V K + G+ F A VVGD DG VG+G +KEV A++ A+ A+ ++ +P++ G T+ +V GK G+ TV + PA G G++A + V G+ +V S GST N V+A + L K Sbjct: 17 LREKMISVNRVTKVVKGGRILGFAALTVVGDGDGRVGMGKGKAKEVPVAVQKAMEQARRNMFKVPLKNG----------TLQHEVHGKHGASTVLLAPAKDGTGVIAGGPMRAVFDVMGVQNVVAKSHGSTNPY-NLVRATLDGLRK 152
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BURM1 (30S ribosomal protein S5 OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=rpsE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.103e-11 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 362 LKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSV--IPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 L+++++ V K + G+ F A VVGD DG VG+G +KEV A++ A+ A+ ++ +P++ G T+ +V GK G+ TV + PA G G++A + V G+ +V S GST N V+A + L K Sbjct: 17 LREKMISVNRVTKVVKGGRILGFAALTVVGDGDGRVGMGKGKAKEVPVAVQKAMEQARRNMFKVPLKNG----------TLQHEVHGKHGASTVLLAPAKDGTGVIAGGPMRAVFDVMGVQNVVAKSHGSTNPY-NLVRATLDGLRK 152
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BEUC1 (30S ribosomal protein S5 OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=rpsE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.103e-11 Identity = 50/133 (37.59%), Postives = 66/133 (49.62%), Query Frame = 2 Query: 392 VQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 V K + G+R F A VVVGD DG VG+G +KEV TAI + AK + V R T+P V G+ + V + PA G G++A + VL AGI DV + S GS+ + N V A L Sbjct: 58 VAKVVKGGRRFSFTALVVVGDGDGTVGVGYGKAKEVPTAIAKGVEEAKKNFFRVPR--------IQGTIPHSVRGEAAAGVVFLRPASPGTGVIAGGPVRAVLDCAGIHDVLSKSLGSSNAI-NIVHATVAAL 181 The following BLAST results are available for this feature:
BLAST of EY659785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659785 ID=EY659785; Name=EY659785; organism=Citrus sinensis; type=EST; length=944bpback to top |