EY659785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_PYRAE (30S ribosomal protein S5P OS=Pyrobaculum aerophilum GN=rps5p PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.704e-42 Identity = 90/193 (46.63%), Postives = 131/193 (67.88%), Query Frame = 2 Query: 236 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKTYGF 808 W P T+LGR+V+EGKIR++++I+ ++ IKE +I+D L+ LK E++ VQ+QT AG+R +F+A V VG+ DG+VG+G+ +++V AI A AKL+++PVRRG W PH+VP V GK GSV + ++PAP+G G+VA V+K VL+ AGI DV+T +RG T+T NF A + L TY F Sbjct: 25 WEPRTELGRMVKEGKIRTIDEIFANNYIIKEPEIVDILLPG-LKQELLNVNLVQRQTHAGERNQFQAVVAVGNEDGYVGVGIGKARQVRQAIEKATREAKLNLVPVRRGCGSWKCSCDEPHSVPFVVRGKSGSVEITLIPAPKGVGLVAGDVAKAVLRLAGIKDVWTKTRGDTRTTLNFAMAVYNALRNTYYF 216
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_METBF (30S ribosomal protein S5P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps5p PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.704e-42 Identity = 93/204 (45.59%), Postives = 133/204 (65.20%), Query Frame = 2 Query: 227 EEKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKTYGFLTPDFWRE 832 +E+W+P T+LG+LV EG++ S+E+ LPI+E QIID L+ L+DEV+ VQ+ T +G+R +F+A V+VG+ +G+VGLG +V AIR AI AKL + + RG W G PHTVP +VTGK GSV+V ++PAPRG GI A + KVL+ AGI DV+T + G+T++ NF KA F+ L + P + +E Sbjct: 4 DEEWIPKTRLGKLVMEGQVASMEEAIKSGLPIREPQIIDMLLPD-LEDEVLDINMVQRMTDSGRRVKFRATVIVGNRNGYVGLGQAKDVQVGPAIRKAIDAAKLDITYIHRGCGSWECACGLPHTVPYEVTGKAGSVSVTLIPAPRGLGIAAGNTATKVLEKAGIKDVWTKTFGTTRSTLNFAKATFDALNQVNVMRLPVYCKE 206
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_ARCFU (30S ribosomal protein S5P OS=Archaeoglobus fulgidus GN=rps5p PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.548e-41 Identity = 87/192 (45.31%), Postives = 133/192 (69.27%), Query Frame = 2 Query: 230 EKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKT 799 E WVP TKLGRLV +GKI+++++ +LP+KE +I+D L+ L+D+V++ VQ+ T +G+RT+F+ VVG+ +G+VG+G + +V+ AI+ AI AKL++ V+RG W G H++P KVTG GSV V ++P P+G GIVA V+K+V++ AG+ DV++ ++G TKT NF KA +E L KT Sbjct: 3 EDWVPKTKLGRLVADGKIKTMDEALASNLPLKEPEIVDILLPD-LEDDVLEISMVQRMTDSGRRTKFRVTAVVGNRNGYVGIGTGKASQVAPAIQKAINNAKLNIFKVQRGCGSWECGCGGDHSLPFKVTGTSGSVRVTLIPGPKGLGIVAGDVAKRVIELAGVKDVWSFTKGQTKTTVNFAKATYEALKKT 193
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_STAMF (30S ribosomal protein S5P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps5p PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 4.345e-41 Identity = 95/204 (46.57%), Postives = 131/204 (64.22%), Query Frame = 2 Query: 221 EEEEKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKTYGFLTPDFW 826 E E WVP T++G++V EGKI SL++I+ +LP+ E +I+D L+ LK E + VQK T AG+R+RF+ VVVG+ DG VG+G +++ A+R A+ AKL++ PVRRG W + G PH++P V GK GSV V + PAP+G G+VA +K VL+ AGI DV+T + G TKT NF KA L TY F+ P W Sbjct: 9 EALETWVPRTRVGKMVVEGKITSLKEIFDRNLPLLEPEIVDYLLPD-LKYERLDVGIVQKVTDAGRRSRFRVVVVVGNEDGFVGVGSGKARQYLVALRKALRNAKLNITPVRRGCGSWECRCGEPHSIPFTVQGKSGSVVVVLKPAPKGTGLVAGDTAKAVLRMAGIKDVWTETFGKTKTTLNFAKAVVNALRNTYKFVAPVDW 211
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_METMA (30S ribosomal protein S5P OS=Methanosarcina mazei GN=rps5p PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 5.675e-41 Identity = 90/190 (47.37%), Postives = 129/190 (67.89%), Query Frame = 2 Query: 227 EEKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 ++ WVP T+LG+LV EG++ S+++ LPI+E QIID L+ L+DEV+ VQ+ T +G+R +F+A V+VG+ +G+VGLG +V AIR AI AKL++ +RRG W G PHTVP +VTGK GSV+V ++PAPRG GI A + KVL+ AGI DV+T + G+T++ NF KA ++ L Sbjct: 4 DQDWVPKTRLGKLVVEGQVASMDEAIKSGLPIREPQIIDMLLPD-LEDEVLDINMVQRMTDSGRRVKFRATVIVGNRNGYVGLGQAKDVQVGPAIRKAIDAAKLNITYIRRGCGSWECACGLPHTVPYEVTGKAGSVSVTLIPAPRGLGIAAGNTATKVLEKAGIKDVWTKTFGTTRSTLNFAKATYDAL 192
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_METAC (30S ribosomal protein S5P OS=Methanosarcina acetivorans GN=rps5p PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 5.675e-41 Identity = 90/190 (47.37%), Postives = 129/190 (67.89%), Query Frame = 2 Query: 227 EEKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 ++ WVP T+LG+LV EG++ S+++ LPI+E QIID L+ L+DEV+ VQ+ T +G+R +F+A V+VG+ +G+VGLG +V AIR AI AKL++ +RRG W G PHTVP +VTGK GSV+V ++PAPRG GI A + KVL+ AGI DV+T + G+T++ NF KA ++ L Sbjct: 4 DQDWVPKTRLGKLVVEGQVASMDEAIKSGLPIREPQIIDMLLPD-LEDEVLDINMVQRMTDSGRRVKFRATVIVGNRNGYVGLGQAKDVQVGPAIRKAIDAAKLNITYIRRGCGSWECACGLPHTVPYEVTGKAGSVSVTLIPAPRGLGIAAGNTATKVLEKAGIKDVWTKTFGTTRSTLNFAKATYDAL 192
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_SULAC (30S ribosomal protein S5P OS=Sulfolobus acidocaldarius GN=rps5p PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 7.412e-41 Identity = 87/201 (43.28%), Postives = 133/201 (66.17%), Query Frame = 2 Query: 230 EKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKTYGFLTPDFW 826 E W P TK+G+L++EGKI S+++++ +LPI E +I+D L+ KL+ +++ VQKQT AG+ +R+K +V+G+ DG++ G +K++ AI+ AI AK+ +IPVRRG W G H++P V+GK GSV V ++PAP+G G+V V K L AG+ DV++ ++GST T NF+KA + L TY F+TP W Sbjct: 11 EDWKPRTKVGQLIKEGKINSMKELFERNLPIVEPEIVDVLLP-KLRYDIVDIGIVQKQTDAGELSRYKVLIVMGNMDGYISYGTGKAKQLRVAIQKAIRDAKMRIIPVRRGCGSWECTCGESHSLPFIVSGKAGSVEVTLLPAPKGTGLVVGSVLKTFLSLAGLKDVWSRTKGSTYTHENFIKAAYIALYNTYRFVTPVDW 210
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_METBU (30S ribosomal protein S5P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps5p PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.264e-40 Identity = 91/207 (43.96%), Postives = 133/207 (64.25%), Query Frame = 2 Query: 221 EEEEKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKTYGFLTPDFWRET 835 E E+WVP T+LG+LV +G++ S+++ LPI+E +I+D L+ +L+DEV+ VQ+ T +G+R +F+A V+VG+ DG VGLG +V AIR AI AK+++ ++RG W G PHTVP +V GK GSVTV + PAPRG G+ A ++KVL+ AG+ DV+T + G T+T NF KA + L+ T P + ET Sbjct: 4 EYNEEWVPQTRLGKLVFDGQVTSMDEAMDSGLPIRESKIVDLLLP-ELEDEVLDINMVQRMTDSGRRVKFRATVIVGNGDGFVGLGQAKDVQVGPAIRKAIDNAKINITRIKRGCGSWECGCGLPHTVPSEVNGKAGSVTVVLKPAPRGLGLAAGGTARKVLEKAGVKDVWTRTEGQTRTTLNFAKATYNALMNTGTVRRPIVFDET 209
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_METTH (30S ribosomal protein S5P OS=Methanobacterium thermoautotrophicum GN=rps5p PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.651e-40 Identity = 88/189 (46.56%), Postives = 126/189 (66.67%), Query Frame = 2 Query: 230 EKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 E+W P T+LGRLV+EG I S+++I+ PI E +IID L+ L++EV+ VQ+ ++G++ F+ V VG+ DG+VGLG ++EV AIR A+ AK ++I VRRG WG GR HTVP KV+GK GSV V ++PAP G G+ V K +++ AGIDDV++ +RG T+T NF +A F+ L Sbjct: 8 EEWEPRTQLGRLVKEGVITSIDEIFEEGHPIMELEIIDALLPD-LEEEVIDVNLVQRMHKSGRKVNFRVIVAVGNKDGYVGLGQGKAREVGPAIRKAVDDAKFNIIKVRRGCGDWGCVCGREHTVPFKVSGKSGSVRVTLIPAPGGVGLAIGDVGKTIMRLAGIDDVWSHTRGQTQTTVNFARATFDAL 195
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_METMJ (30S ribosomal protein S5P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps5p PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.183e-38 Identity = 86/193 (44.56%), Postives = 125/193 (64.77%), Query Frame = 2 Query: 227 EEKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKT 799 +E+W+P+T LGR+V G+I S++++ PIKE QI+D L+ L+DEV+ VQ+ T +G+R +F+ VVVG+ +G+VG G +V AI+ AI+ AKL++I V RG W H++P +VTGK GSV V + PAP+G G+V + KKVL AGI DV+ +RG T+T N+ KA FE L +T Sbjct: 5 QEEWIPLTGLGRMVAAGEITSIDEVLASGRPIKEPQIVDLLLPD-LEDEVLDINMVQRMTDSGRRVKFRTVVVVGNRNGYVGFGQGKDVQVGNAIQKAIVNAKLNLIKVSRGCGSWECGCETAHSIPIEVTGKAGSVKVTLKPAPQGIGLVTGDIPKKVLMLAGIKDVWAFNRGQTRTTINYAKATFEALKQT 196 The following BLAST results are available for this feature:
BLAST of EY659785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659785 ID=EY659785; Name=EY659785; organism=Citrus sinensis; type=EST; length=944bpback to top |