EY659785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_AYWBP (30S ribosomal protein S5 OS=Aster yellows witches'-broom phytoplasma (strain AYWB) GN=rpsE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.103e-11 Identity = 46/139 (33.09%), Postives = 76/139 (54.68%), Query Frame = 2 Query: 362 LKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVA-ARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKA 775 L+++V+K + K + G R RF A VVVGD G +G +KE+ AI+ A+ AK ++ + +G T+P G+ G+ + PA +G GIVA + ++ +L+ GI+DV T + GS +T N ++A Sbjct: 29 LEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAKKQLVRI------PIVGT--TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLTKTFGS-RTSINVIRA 158
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RR5_THAPS (30S ribosomal protein S5, chloroplastic OS=Thalassiosira pseudonana GN=rps5 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.103e-11 Identity = 44/141 (31.21%), Postives = 73/141 (51.77%), Query Frame = 2 Query: 341 DTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGN 763 D L K + ++K V K T+ G++ F+A VV+GD +G VG+GV +++V A + A + ++I V I + ++P V G G+ + M P+ G+G++A + VL+ AGI +V GS L N Sbjct: 19 DNLNEAKFVERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKAKTDGRKNLIDV-------PITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVIAKQLGSDNLLNN 152
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_ZYMMO (30S ribosomal protein S5 OS=Zymomonas mobilis GN=rpsE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.747e-11 Identity = 50/148 (33.78%), Postives = 75/148 (50.68%), Query Frame = 2 Query: 353 GHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVI--PVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 G +L ++++ V K + G+R F A VVVGD G VG G ++EV AI A AK ++I P+R G + GR G+ G+ V + AP G GI+A + + + G+ DV T S G++ N ++A FE L Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAAKKTMIRVPLREGRTLHHDGR---------GRFGAGLVYLRSAPSGTGIIAGGPMRAIFESLGVADVVTKSVGTSNPY-NMIRATFEAL 193
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_TROWT (30S ribosomal protein S5 OS=Tropheryma whipplei (strain Twist) GN=rpsE PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.747e-11 Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = 2 Query: 368 DEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 + V++ V K + G++ F A VVVGD DG VG+G ++EV AI I A+ + V R T+P V G+ S V + PA G G++A + VL+ AG+ DV + S GS+ ++ N V A + L Sbjct: 55 ERVVRINRVAKVVKGGRKFSFSALVVVGDGDGTVGVGYGKAREVPLAISKGIESARKNFFTVPR--------VASTIPHPVQGEAASGVVLLRPAAPGTGVIAGGPVRAVLECAGVRDVLSKSLGSSNSI-NVVYATLDAL 186
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_TROW8 (30S ribosomal protein S5 OS=Tropheryma whipplei (strain TW08/27) GN=rpsE PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.747e-11 Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = 2 Query: 368 DEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 + V++ V K + G++ F A VVVGD DG VG+G ++EV AI I A+ + V R T+P V G+ S V + PA G G++A + VL+ AG+ DV + S GS+ ++ N V A + L Sbjct: 55 ERVVRINRVAKVVKGGRKFSFSALVVVGDGDGTVGVGYGKAREVPLAISKGIESARKNFFTVPR--------VASTIPHPVQGEAASGVVLLRPAAPGTGVIAGGPVRAVLECAGVRDVLSKSLGSSNSI-NVVYATLDAL 186
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_SYNFM (30S ribosomal protein S5 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rpsE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.747e-11 Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = 2 Query: 359 KLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSV--IPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 +L D+V+ V K + G+R F A VVVGD +G VG + + EV AIR + AK ++ +P+ T+P +V G+ G+ +V + PA G G++A + +++ AGI ++ T GS + N VKA E L Sbjct: 10 QLIDKVVHISRVAKVVKGGRRFSFSAIVVVGDGNGRVGFSLGKANEVPEAIRKGMESAKRTMFEVPLVNA----------TIPHEVLGRFGAASVVLKPASAGTGVIAGGAVRAIMEAAGIHNILTKCIGS-RNPHNVVKATLEGL 144
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_STRGG (30S ribosomal protein S5 OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=rpsE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.747e-11 Identity = 47/133 (35.34%), Postives = 67/133 (50.38%), Query Frame = 2 Query: 392 VQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 V K + G+R F A VVVGD DG VG+G +KEV AI + AK + V R T+P +TG+ + V + PA G G++A + VL+ AG+ D+ + S GS+ + N V A L Sbjct: 44 VAKVVKGGRRFSFTALVVVGDGDGTVGVGYGKAKEVPAAIAKGVEEAKKNFFKVPR--------IQGTIPHPITGEKAAGVVLLKPASPGTGVIAGGPVRAVLECAGVHDILSKSLGSSNAI-NIVHATVAAL 167
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_RHOPB (30S ribosomal protein S5 OS=Rhodopseudomonas palustris (strain BisB18) GN=rpsE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.747e-11 Identity = 50/143 (34.97%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 368 DEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAK--LSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 D+++ V K + G+R F A VV+GD G VG G ++EV AIR A AK L+ +P+R G T+ + G+ G+ V + AP G GI+A + V + GI DV S GS+ N V+A F+ L Sbjct: 24 DKLVHINRVAKVVKGGKRFGFAALVVIGDQKGRVGFGHGKAREVPEAIRKATESAKRNLTRVPLREG---------RTLHHDIAGRHGAGRVYLRAAPAGTGIIAGGPMRAVFETLGIQDVVAKSIGSSNPY-NMVRATFDAL 156
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_RHOP5 (30S ribosomal protein S5 OS=Rhodopseudomonas palustris (strain BisA53) GN=rpsE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.747e-11 Identity = 50/143 (34.97%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 368 DEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAK--LSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 D+++ V K + G+R F A VV+GD G VG G ++EV AIR A AK L+ +P+R G T+ + G+ G+ V + AP G GI+A + V + GI DV S GS+ N V+A F+ L Sbjct: 24 DKLVHINRVAKVVKGGKRFGFAALVVIGDQKGRVGFGHGKAREVPEAIRKATESAKRNLTRVPLREG---------RTLHHDIAGRHGAGRVYLRAAPAGTGIIAGGPMRAVFETLGIQDVVAKSIGSSNPY-NMVRATFDAL 156
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_NITWN (30S ribosomal protein S5 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rpsE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.747e-11 Identity = 50/143 (34.97%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 368 DEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAK--LSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 D+++ V K + G+R F A VV+GD G VG G ++EV AIR A AK L+ +P+R G T+ + G+ G+ V + AP G GI+A + V + GI DV S GS+ N V+A F+ L Sbjct: 25 DKLVHINRVAKVVKGGKRFGFAALVVIGDQKGRVGFGHGKAREVPEAIRKATESAKRNLTRVPLREG---------RTLHHDIAGRHGAGRVYLRAAPAGTGIIAGGPMRAVFETLGIQDVVAKSVGSSNPY-NMVRATFDAL 157 The following BLAST results are available for this feature:
BLAST of EY659785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659785 ID=EY659785; Name=EY659785; organism=Citrus sinensis; type=EST; length=944bpback to top |