EY659785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_THEAB (30S ribosomal protein S5 OS=Thermosipho africanus (strain TCF52B) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.120e-11 Identity = 39/130 (30.00%), Postives = 71/130 (54.62%), Query Frame = 2 Query: 365 KDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSV--IPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGST 748 ++ +++ K T+ G+ F+ VVG+ +G VG+GV ++EV AIR A+ A+ +V +P+ G T+P ++ G+ + V + PA G GI++ + V++ AGI ++ T + GST Sbjct: 16 EERIVEIRRTTKVTKGGKNLSFRVLAVVGNRNGKVGVGVGKAREVPDAIRKALSAARRNVFEVPIYNG----------TIPHEIVGRQDAAKVLLKPAAPGTGIISNGTVRAVVELAGIHNILTKTSGST 135
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_STRCO (30S ribosomal protein S5 OS=Streptomyces coelicolor GN=rpsE PE=3 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 6.120e-11 Identity = 49/133 (36.84%), Postives = 65/133 (48.87%), Query Frame = 2 Query: 392 VQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 V K + G+R F A VVVGD DG VG+G +KEV AI + AK V R T+P + G+ + V + PA G G++A + VL+ AGI DV + S GS + N V A E L Sbjct: 44 VAKVVKGGRRFSFTALVVVGDGDGTVGVGYGKAKEVPAAIAKGVEEAKKHFFKVPR--------IQGTIPHPIQGEKAAGVVLLKPASPGTGVIAGGPVRAVLECAGIHDVLSKSLGSDNQI-NIVHATVEAL 167
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_SILPO (30S ribosomal protein S5 OS=Silicibacter pomeroyi GN=rpsE PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.120e-11 Identity = 49/143 (34.27%), Postives = 69/143 (48.25%), Query Frame = 2 Query: 368 DEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 D ++ V K + G+R F A VVVGD G VG G +KEV AIR A AK +I V ++ T+ + G+ G+ V M AP G GI+A + V + G+ DV + S GS N ++A + L K Sbjct: 23 DRLVAINRVSKTVKGGKRFGFAALVVVGDQKGRVGFGKGKAKEVPEAIRKATEQAKRQMIRV-------QLREGRTLHHDIEGRHGAGKVVMRAAPEGTGIIAGGPMRAVFEMLGVKDVVSKSLGSANPY-NMIRATIDGLKK 157
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_SALTO (30S ribosomal protein S5 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.120e-11 Identity = 49/133 (36.84%), Postives = 68/133 (51.13%), Query Frame = 2 Query: 392 VQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 V K + G+R F A V+VGD DG VG+G +KEV AI + AK V R IG+ ++P V G+ + V + PA G G++A + VL+ AGI DV + S GS+ + N V A L Sbjct: 47 VAKVVKGGRRFSFTALVIVGDGDGTVGVGYGKAKEVPAAIAKGVEEAKKHFFKVPR------IGQ--SIPHPVQGEDAAGVVLLKPASAGTGVIAGGPVRAVLECAGIHDVLSKSLGSSNPI-NIVHATLAAL 170
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_METS4 (30S ribosomal protein S5 OS=Methylobacterium sp. (strain 4-46) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.120e-11 Identity = 49/141 (34.75%), Postives = 69/141 (48.94%), Query Frame = 2 Query: 368 DEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 D ++ V K + G+R F A VVVGD G VG G ++EV AIR A AK +I V + T+ V G+ GS V + AP+G GI+A + V + G+ DV S GS+ N ++A F+ L Sbjct: 22 DRLVHINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRGLIRV-------ALREGRTLHHDVAGRHGSGKVILRAAPQGTGIIAGGPMRAVFESVGMQDVVAKSLGSSNPY-NLIRATFDAL 154
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_GLUDA (30S ribosomal protein S5 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.120e-11 Identity = 53/148 (35.81%), Postives = 72/148 (48.65%), Query Frame = 2 Query: 353 GHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVI--PVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 G L D+++ V K + G+R F A VVVGD G VG G ++EV AIR A AK ++I P++ G T+ V G G+ V + A G GI+A + V + GI+DV S G T+ N VKA F L Sbjct: 19 GDDLVDKLVTINRVAKVVKGGRRFAFAALVVVGDQKGRVGYGAGKAREVPEAIRKATDRAKRAMIRVPMKEG---------RTLHHDVAGHFGAGKVVLRSADAGTGIIAGGPMRAVFESLGINDVVAKSLG-TRNPHNMVKATFAAL 156
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_DEIGD (30S ribosomal protein S5 OS=Deinococcus geothermalis (strain DSM 11300) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.120e-11 Identity = 43/133 (32.33%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 398 KQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVI--PVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 K + G+R RF A V++GD +G VG+G+ +KEV AI A +A+ ++I PV G T+P ++ G+ + V + PA G G++A V + + + AGI ++ + GS + N A F+ L Sbjct: 28 KTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAIARKNMITVPVENG----------TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGSRNKI-NVAYAVFDGL 149
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_DEHE1 (30S ribosomal protein S5 OS=Dehalococcoides ethenogenes (strain 195) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.120e-11 Identity = 48/139 (34.53%), Postives = 70/139 (50.36%), Query Frame = 2 Query: 359 KLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKA 775 +L D+++ V K + G+R F A VV GD HVG+GV +KEV +AI A AK ++ + + TVP ++ K G+ V + PA G GI+A + VL+ GI D+ T S G + N KA Sbjct: 14 ELNDKLIFINRVTKVVKGGKRMGFAALVVTGDGKNHVGIGVGKAKEVPSAISKASANAKRNLSRI--------LLNGTTVPHEIVFKYGAAQVLLKPAAPGTGIIAGGSVRAVLESTGIKDILTKSMGCSNK-ANVAKA 143
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_CAMJR (30S ribosomal protein S5 OS=Campylobacter jejuni (strain RM1221) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.120e-11 Identity = 44/138 (31.88%), Postives = 71/138 (51.45%), Query Frame = 2 Query: 392 VQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKTYG 805 V K + G+R RF A V+VG+ G VG+G +KEV AIR A+ A +++ V+ + T+ V K + + + PA G G++A ++ +++ AGI D+ T S GS + N V+A + L G Sbjct: 19 VTKVVKGGRRFRFTALVIVGNRKGLVGVGYGKAKEVPDAIRKAVDDAFKNIVEVKT--------KGSTIAHDVEVKYNASRILLKPASEGTGVIAGGSTRPIVELAGIKDILTKSLGSNNS-ANVVRATIKALTMLKG 147
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_CAMJJ (30S ribosomal protein S5 OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.120e-11 Identity = 44/138 (31.88%), Postives = 71/138 (51.45%), Query Frame = 2 Query: 392 VQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKTYG 805 V K + G+R RF A V+VG+ G VG+G +KEV AIR A+ A +++ V+ + T+ V K + + + PA G G++A ++ +++ AGI D+ T S GS + N V+A + L G Sbjct: 19 VTKVVKGGRRFRFTALVIVGNRKGLVGVGYGKAKEVPDAIRKAVDDAFKNIVEVKT--------KGSTIAHDVEVKYNASRILLKPASEGTGVIAGGSTRPIVELAGIKDILTKSLGSNNS-ANVVRATIKALTMLKG 147 The following BLAST results are available for this feature:
BLAST of EY659785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659785 ID=EY659785; Name=EY659785; organism=Citrus sinensis; type=EST; length=944bpback to top |