EY659785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_METVA (30S ribosomal protein S5P OS=Methanococcus vannielii GN=rps5p PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.873e-38 Identity = 84/189 (44.44%), Postives = 123/189 (65.08%), Query Frame = 2 Query: 230 EKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 + W P T++GR+V+EG I + I LP+ E +I+D L+ L+++V+ VQ+ ++G+R R++A VVVG+ +G+VG+G+ SKEV AIR AI AKLS+I VR G W G PH++P G CGSV V ++PAPRG G+VA V+K VL AG+ D +T++ G T+T NF +A F+ L Sbjct: 14 DSWEPKTQVGRMVKEGTISDISYIMDKGLPLLEPEIVDVLLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAQAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGTCGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTTTYGDTRTTYNFAEATFDAL 201
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_METMP (30S ribosomal protein S5P OS=Methanococcus maripaludis GN=rps5p PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.873e-38 Identity = 85/189 (44.97%), Postives = 122/189 (64.55%), Query Frame = 2 Query: 230 EKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 E W P T++GR+V+EG I + I LP+ E +I+D L+ L+++V+ VQ+ ++G+R R++A VVVG+ +G+VG+G+ SKEV AIR AI AKLS+I VR G W G PH++P G CGSV V ++PAPRG G+VA V+K VL AG+ D +T + G T+T NF +A F+ L Sbjct: 14 EAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTRTTYNFAEATFDAL 201
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_METM7 (30S ribosomal protein S5P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps5p PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.873e-38 Identity = 86/189 (45.50%), Postives = 122/189 (64.55%), Query Frame = 2 Query: 230 EKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 E W P T++GR+V+EG I + I LP+ E +I+D L+ L+++V+ VQ+ ++G+R R++A VVVG+ +G+VG+G+ SKEV AIR AI AKLS+I VR G W G PH++P G CGSV V ++PAPRG G+VA V+K VL AGI D +T + G T+T NF +A F+ L Sbjct: 18 EAWEPKTQIGRMVKEGTISDINYIMDKGLPLLEPEIVDALLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRIGCGSWECGCGYPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGIKDAWTKTFGDTRTTYNFAEATFDAL 205
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_HALSA (30S ribosomal protein S5P OS=Halobacterium salinarium GN=rps5p PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.873e-38 Identity = 88/205 (42.93%), Postives = 122/205 (59.51%), Query Frame = 2 Query: 230 EKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKTYGFLTPDFWRETR 838 + W P T+LG LV++G++ + + LP+KE +I+D L+ L DEV+ VQ+ T +G+R +F+ V +G+ DG+VG +V AI+ AI +AKL++I V RG W GRPHTV K TGK GSV V ++PAPRG G+ + VL+ AGIDDV+T S G T+T NF KA F L +T P RE R Sbjct: 5 DTWQPKTRLGGLVQDGEVEDMSEALDTGLPLKEPEIVDQLLPG-LDDEVLDINMVQRMTDSGRRVKFRCVVAIGNRDGYVGYAEGRDDQVGGAIQKAIEVAKLNIIDVSRGCGSWECGCGRPHTVALKSTGKAGSVDVELMPAPRGLGLAGGETVQHVLELAGIDDVWTRSSGKTRTTVNFAKATFNALRETSEARVPQHAREER 208
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_PYRAB (30S ribosomal protein S5P OS=Pyrococcus abyssi GN=rps5p PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 7.670e-38 Identity = 84/195 (43.08%), Postives = 120/195 (61.54%), Query Frame = 2 Query: 230 EKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTL---IGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKT 799 ++W P TKLG LV+EG+I + +I+ IKE +IID L + + E++ + T +G+R RF+ VG+ DG+VGLG+ +EV AIR AI AKL++I ++RG W + RPH+VP V GK GSV V+++P PRG G+V V KK+L+ AGI DV++ + G T+T NF KA F L T Sbjct: 14 DEWQPKTKLGMLVKEGQITDIHEIFRKGYQIKEPEIIDVLLPEVNARENQEILDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGREVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFTVEGKEGSVRVKLIPGPRGLGLVIGDVGKKILRLAGIQDVWSQTLGETRTTVNFAKAVFNALYNT 208
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_PYRKO (30S ribosomal protein S5P OS=Pyrococcus kodakaraensis GN=rps5p PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.002e-37 Identity = 83/195 (42.56%), Postives = 120/195 (61.54%), Query Frame = 2 Query: 230 EKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGH---KLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKT 799 E+W P TKLGRLV+EG+I + +I+ IKE +I+D L+ + EV+ + T +G+R RF+ VG+ DG+VGLG+ +EV AIR AI AK+++I ++RG W + RPH++P V GK GSV V+++P PRG G+V V KK+L AG+ DV++ + G T+T NF KA F L T Sbjct: 13 EEWEPKTKLGRLVKEGQITDIHEIFRKGYQIKEPEIVDVLLPEVNLRENQEVLDIALTVRMTDSGRRIRFRVLAAVGNRDGYVGLGIGHGREVGIAIRKAINYAKMNIIEIKRGCGSWECRCRRPHSIPFAVEGKEGSVRVKLMPGPRGLGLVIGDVGKKILTLAGVQDVWSQTLGETRTTVNFAKAVFNALYNT 207
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_PICTO (30S ribosomal protein S5P OS=Picrophilus torridus GN=rps5p PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.002e-37 Identity = 85/193 (44.04%), Postives = 123/193 (63.73%), Query Frame = 2 Query: 227 EEKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKT 799 +E+W P T+LGRLV G+I+++ + LP+KEYQI+D LI LKDEV+ Q+ T +G+R + VVG+ +G+VG+G +KE + AI+ AI AKL++I ++RG W G+PHT+P V GK GSV+V + PAP+G G+ V K +L+ AGIDD + + G TKT N+ A F+ L KT Sbjct: 2 DEEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLIPD-LKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCGKPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKTTVNYALATFDALKKT 193
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_THEVO (30S ribosomal protein S5P OS=Thermoplasma volcanium GN=rps5p PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.709e-37 Identity = 81/192 (42.19%), Postives = 124/192 (64.58%), Query Frame = 2 Query: 230 EKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKT 799 ++W P T+LG+LV G+I+++ + LP+KEY+I+D L+ + +KDEV+ Q+ T +G+R + VVVG+ DG++GLG+ SKE + AIR A+I AKL+++ +RRG W GR HT+P V GK GSV + + PAPRG G+ V+K +L+ AGI+D + + G TKT N+ A + L +T Sbjct: 3 DEWTPRTQLGKLVASGQIKTISEALKTKLPLKEYEIVDYLLPN-IKDEVIDIKRAQRMTDSGRRMTYSITVVVGNEDGYIGLGIGRSKEAAPAIRKALINAKLNIMEIRRGCGSWECGCGRAHTLPFLVEGKSGSVRITLKPAPRGVGLAVGNVAKIILRMAGIEDAWGFAAGHTKTTVNYALAVYNALKET 193
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_METM5 (30S ribosomal protein S5P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps5p PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.709e-37 Identity = 84/189 (44.44%), Postives = 121/189 (64.02%), Query Frame = 2 Query: 230 EKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 E W P T++GR+V+EG I + I LP+ E +I+D L+ L+++V+ VQ+ ++G+R R++A V VG+ +G+VG+G+ SKEV AIR AI AKLS+I VR G W G PH++P G CGSV V ++PAPRG G+VA V+K VL AG+ D +T + G T+T NF +A F+ L Sbjct: 18 EAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALLPD-LEEQVLDVKLVQRMHKSGRRARYRATVAVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSPHSIPFAAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTRTTFNFAEATFDAL 205
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_HALMA (30S ribosomal protein S5P OS=Haloarcula marismortui GN=rps5p PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.889e-36 Identity = 85/203 (41.87%), Postives = 121/203 (59.61%), Query Frame = 2 Query: 236 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKTYGFLTPDFWRETR 838 W P T+LG+ V EG+I S+++ LP+KE +++D L+ L+DEV+ VQ+ T +G+R +F+ V VG+ DG +G +V AI+ AI +AKL++I V RG W GRPHTV + GK GSV V + PAPRG G+ +KVL+ AGI+D++T S G+T+T NF KA F L T P+ E R Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLVPD-LEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRTTVNFAKATFNALQNTAEARVPERTFEKR 208 The following BLAST results are available for this feature:
BLAST of EY659785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659785 ID=EY659785; Name=EY659785; organism=Citrus sinensis; type=EST; length=944bpback to top |