EY659785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_GEOKA (30S ribosomal protein S5 OS=Geobacillus kaustophilus GN=rpsE PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.319e-16 Identity = 55/144 (38.19%), Postives = 82/144 (56.94%), Query Frame = 2 Query: 359 KLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 +L++ V+ V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P +V G G+ + + PA G G++A ++ VL+ AGI D+ + S GS + N V+A F+ L Sbjct: 10 ELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLIEV------PIVGT--TIPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPI-NMVRATFDGL 144
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_FLAPJ (30S ribosomal protein S5 OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.319e-16 Identity = 55/148 (37.16%), Postives = 81/148 (54.73%), Query Frame = 2 Query: 353 GHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 G +LKD ++ V K T+ G+ F A VVVGD +G VG G+ SK+VS AI A+ AK +++ + +VP + GK G V ++PA G G++A + VL+ GI DV + S+GS+ N VKA F+ LL+ Sbjct: 15 GLELKDRLVSVNRVTKVTKGGRAFGFSAIVVVGDENGVVGHGLGKSKDVSEAIAKAVEDAKKNLVKIPLS--------GKSVPHEQKGKFGGARVNLMPASHGTGVIAGGAVRSVLESVGIHDVLSKSQGSSNP-HNVVKATFDALLQ 153
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BACST (30S ribosomal protein S5 OS=Bacillus stearothermophilus GN=rpsE PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.319e-16 Identity = 55/144 (38.19%), Postives = 82/144 (56.94%), Query Frame = 2 Query: 359 KLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 +L++ V+ V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P +V G G+ + + PA G G++A ++ VL+ AGI D+ + S GS + N V+A F+ L Sbjct: 10 ELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLIEV------PIVGT--TIPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPI-NMVRATFDGL 144
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_GEOTN (30S ribosomal protein S5 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rpsE PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.408e-15 Identity = 54/144 (37.50%), Postives = 82/144 (56.94%), Query Frame = 2 Query: 359 KLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 +L++ V+ V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK +++ V +G T+P +V G G+ + + PA G G++A ++ VL+ AGI D+ + S GS + N V+A F+ L Sbjct: 10 ELEERVVAINRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLMEV------PIVGT--TIPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPI-NMVRATFDGL 144
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_AQUAE (30S ribosomal protein S5 OS=Aquifex aeolicus GN=rpsE PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.408e-15 Identity = 59/160 (36.88%), Postives = 84/160 (52.50%), Query Frame = 2 Query: 323 KEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVI--PVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 K+ I + L +L++ ++ + + T+ G+R F VVVGD GHVG G +KEV+ AI I AK +VI P+ G TVP V G G+ + ++PA RG G+VA +K V + AG DV T GST N V+A F+ LL+ Sbjct: 15 KQQNIEEILPELQLEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKNVIRVPIVDG----------TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGSTNP-DNVVRAVFDALLQ 163
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_UREU1 (30S ribosomal protein S5 OS=Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) GN=rpsE PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.838e-15 Identity = 53/151 (35.10%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 365 KDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKTYGFLTP 817 ++ V+K + K T+ G+ RF A VV+GD +G VG G+ S EV AI+ AI A ++I V++ G ++ V G+ G+ V ++PAP G GI+A + V++ AG D++T SRG+ + N ++A LL+ LTP Sbjct: 50 EERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANNNLIKVKQTKKG-------SIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPM-NVIRATINGLLQQ---LTP 189
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_UREPA (30S ribosomal protein S5 OS=Ureaplasma parvum GN=rpsE PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.838e-15 Identity = 53/151 (35.10%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 365 KDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKTYGFLTP 817 ++ V+K + K T+ G+ RF A VV+GD +G VG G+ S EV AI+ AI A ++I V++ G ++ V G+ G+ V ++PAP G GI+A + V++ AG D++T SRG+ + N ++A LL+ LTP Sbjct: 50 EERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANNNLIKVKQTKKG-------SIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPM-NVIRATINGLLQQ---LTP 189
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_UREP2 (30S ribosomal protein S5 OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) GN=rpsE PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.838e-15 Identity = 53/151 (35.10%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 365 KDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKTYGFLTP 817 ++ V+K + K T+ G+ RF A VV+GD +G VG G+ S EV AI+ AI A ++I V++ G ++ V G+ G+ V ++PAP G GI+A + V++ AG D++T SRG+ + N ++A LL+ LTP Sbjct: 50 EERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANNNLIKVKQTKKG-------SIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPM-NVIRATINGLLQQ---LTP 189
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_FUSNN (30S ribosomal protein S5 OS=Fusobacterium nucleatum subsp. nucleatum GN=rpsE PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.401e-15 Identity = 44/145 (30.34%), Postives = 79/145 (54.48%), Query Frame = 2 Query: 356 HKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 ++ +++++K V K T+ G+ F VGD +G +GLG+ + V AIR AI AK +++ + + +T+P ++ GK G+ T+ M PA G G++A S+++L+ G+ D+ T +GS + N +A E L Sbjct: 7 NQYQEKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIVKISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGS-RNKHNVARATVEAL 142
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_CLOPS (30S ribosomal protein S5 OS=Clostridium perfringens (strain SM101 / Type A) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.136e-15 Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = 2 Query: 362 LKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 LK++V+ V K + G+ RF A VVVGD +GHVG+G S E+ AIR I AK +++ V + +G TVP ++ GK G+ V ++PA G G++A ++ VL+ AG+ DV S GS N VKA L Sbjct: 10 LKEKVVSISRVTKVVKGGRNFRFSALVVVGDENGHVGVGTGKSIEIPEAIRKGIEDAKKNLVEV------SIVGT--TVPHEIHGKFGTGDVLIMPATEGTGVIAGGPARSVLELAGLKDVRAKSLGSNNP-RNMVKATINGL 143 The following BLAST results are available for this feature:
BLAST of EY659785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659785 ID=EY659785; Name=EY659785; organism=Citrus sinensis; type=EST; length=944bpback to top |