EY659773
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659773 vs. ExPASy Swiss-Prot
Match: RBSC_SOLTU (Ribulose bisphosphate carboxylase small chain 2C, chloroplastic OS=Solanum tuberosum GN=RBCS-2C PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 9.958e-69 Identity = 131/218 (60.09%), Postives = 156/218 (71.56%), Query Frame = 2 Query: 41 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 694 MASS++SS VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWP P +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWP-------------------------------------PINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY659773 vs. ExPASy Swiss-Prot
Match: RBSA_SOLTU (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum tuberosum GN=RBCS-2A PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 9.958e-69 Identity = 131/218 (60.09%), Postives = 156/218 (71.56%), Query Frame = 2 Query: 41 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 694 MASS++SS VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWP P +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVRCMQVWP-------------------------------------PINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY659773 vs. ExPASy Swiss-Prot
Match: RBS4_SOYBN (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Glycine max GN=RBCS-4 PE=3 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.698e-68 Identity = 135/217 (62.21%), Postives = 148/217 (68.20%), Query Frame = 2 Query: 41 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 691 MASSMISS V T NRA A MVAPFTG LKS + P T+KTNNDITSIASNGGRVQCM+VWPP G KKFETLSYLP L D L KE+ YLLR GWIPCLEFELE G+VYREH+ S GYYDGRYWTMWKLPM+GCTDA+QVLKE+ E + YP+ F+RIIGFDN RQVQCISF+A KPP Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTG-------------------------------------LKSMAGLP-TRKTNNDITSIASNGGRVQCMQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSLGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPP 176
BLAST of EY659773 vs. ExPASy Swiss-Prot
Match: RBS_GLYTO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella GN=RBCS PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.897e-68 Identity = 134/217 (61.75%), Postives = 148/217 (68.20%), Query Frame = 2 Query: 41 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 691 MASSMISS V T NRA A VAPFTG LKS + FP T+KTNNDI SIASNGGRVQCM+VWP TG KKFETLSYLP L D L KE+ YLLR GWIPCLEFELE G+VYRE+H SPGYYDGRYWTMWKLP++GCTDA+QVLKE+ E + YP+ F+RIIGFDN RQVQCISF+A KPP Sbjct: 1 MASSMISSPAVTTVNRAG---AGTVAPFTG-------------------------------------LKSMAGFP-TRKTNNDIASIASNGGRVQCMQVWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPVFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPP 176
BLAST of EY659773 vs. ExPASy Swiss-Prot
Match: RBS1_SOLTU (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum tuberosum GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 4.942e-68 Identity = 130/219 (59.36%), Postives = 155/219 (70.78%), Query Frame = 2 Query: 41 MASSMISSTTVATANRASLAQA-SMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 694 MASS+ISS VAT R ++ QA SM+APFTG LKS++ FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP L+DE LLKE+ YLL++GW+PCLEFE E G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 1 MASSVISSAAVAT--RTNVTQAGSMIAPFTG-------------------------------------LKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of EY659773 vs. ExPASy Swiss-Prot
Match: RBS_TOBAC (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana tabacum GN=RBCS PE=1 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 6.454e-68 Identity = 129/218 (59.17%), Postives = 155/218 (71.10%), Query Frame = 2 Query: 41 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 694 MASS++SS VAT R+++AQA+MVAPF TGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP KK+ETLSYLP LS E LL E+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 1 MASSVLSSAAVAT--RSNVAQANMVAPF-------------------------------------TGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY659773 vs. ExPASy Swiss-Prot
Match: RBS1_NICSY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana sylvestris GN=RBCS PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 6.454e-68 Identity = 129/218 (59.17%), Postives = 155/218 (71.10%), Query Frame = 2 Query: 41 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 694 MASS++SS VAT R+++AQA+MVAPF TGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP KK+ETLSYLP LS E LL E+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 1 MASSVLSSAAVAT--RSNVAQANMVAPF-------------------------------------TGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY659773 vs. ExPASy Swiss-Prot
Match: RBS_STELP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Stellaria longipes GN=RBCS PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 8.430e-68 Identity = 131/216 (60.65%), Postives = 153/216 (70.83%), Query Frame = 2 Query: 41 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 688 MASS++SS VAT R++ AQASMVAPF TGLKS+++FP ++KTN DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LS E LL EI YLL++GW+PCLEFE E G+VYREH SSPGYYDGRYWTMWKLPM+GCTDATQV EV E +K YP + +RIIGFDN RQVQCISF+A KP Sbjct: 1 MASSIMSSAAVAT--RSNGAQASMVAPF-------------------------------------TGLKSNASFPVSRKTNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEFETEHGFVYREHTSSPGYYDGRYWTMWKLPMFGCTDATQVAAEVQEAKKAYPDAHIRIIGFDNVRQVQCISFIAYKP 177
BLAST of EY659773 vs. ExPASy Swiss-Prot
Match: RBS_CAPAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 1.101e-67 Identity = 130/216 (60.19%), Postives = 151/216 (69.91%), Query Frame = 2 Query: 41 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 688 MASS++S+ TVAT A+ AQASM+A F GL KS+++FP T+K + DITSIASNGGRV+CM VWPP KK+ETLSYLP LSDE LLKEI YLL+ GW+PCLEFE E G+VYREHH SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP Sbjct: 1 MASSVMSTATVATG--ANAAQASMIASFNGL-------------------------------------KSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 177
BLAST of EY659773 vs. ExPASy Swiss-Prot
Match: RBS3_AMAHP (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS3 PE=2 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 1.101e-67 Identity = 122/180 (67.78%), Postives = 142/180 (78.89%), Query Frame = 2 Query: 155 ATKKTNNDITSIASNGGRVQCMKVWPPTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 694 A+ +N IT++ G Q V P GLKS ++FP T+K+N DITSIASNGGRVQCM+VWPP G KKFETLSYLPPLSD LL ++ YLL +GWIPC+EFELE +VYRE+H SPGY DGRYWTMWKLPMYGCTD QVL EV E +K YP +F+RIIGFDNKRQVQC+SF+A KPPG Sbjct: 2 ASSLMSNAITAVVGASG-AQANMVAPFNGLKSIASFPVTRKSN-DITSIASNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNNGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAFKPPG 179 The following BLAST results are available for this feature:
BLAST of EY659773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659773 ID=EY659773; Name=EY659773; organism=Citrus sinensis; type=EST; length=884bpback to top |