EY659756

Overview
NameEY659756
Unique NameEY659756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659756 vs. ExPASy Swiss-Prot
Match: YG2V_YEAST (Uncharacterized protein YGR110W OS=Saccharomyces cerevisiae GN=YGR110W PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.871e-11
Identity = 48/144 (33.33%), Postives = 69/144 (47.92%), Query Frame = 1 
Query:  352 DEPRFINTVTFDSKE------DSPTLIMVHGYGASQGFFFRNFD---ALASRFRVIAVDQLGCGGSSRPDFTCK----STEETEAWFIDSFEEWRKAKNLSN----FILLEHSLGRVCAAKYALKHPE--HVQHLILVGPAGIS 726
            DE  +IN      ++      D   L+ +HGYGA  GFF +NF+    L + + + A+D  G G SSRP F  +    +    + WF +    W   +NL N     I++ HSLG    A Y  K+ E    + LIL  PAG+S
Sbjct:  118 DEGNYINEFCIRPRKTSVPEADLKHLVFIHGYGAGLGFFIKNFEDIPLLDNEWCIHAIDLPGYGFSSRPKFPFEYPRDNIHSVQDWFHERIHTWFSKRNLLNRPEKNIVMAHSLGSYLMALYLQKYKESPSFKKLILCSPAGVS 261
The following BLAST results are available for this feature:
BLAST of EY659756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
YG2V_YEAST7.871e-1133.33Uncharacterized protein YGR110W OS=Saccharomyces c... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-G03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659756 ID=EY659756; Name=EY659756; organism=Citrus sinensis; type=EST; length=933bp
CCACGCGTCCGATCGATAATTGATTCACCGGCACTGTTCCTGCTCAGCAA
TCGTTACCCAAATTGTATGAATCTGCGGGGGTCCAGCTCAATTCCGAAAA
TGGCAGAAGAAATTAGCAAGAGCGAGCTAAGATCCTCTGCTGCTGCCACA
TCAACACCATCATCATCTACGACTGCAAAATCGAGATGGTCCTGGCCGTC
CGTCCTCCGTTGGATTCCCACTTCTAACAATCACATCATTGCCGCCGAAA
AGCGCCTCCTCTCTATAATCAAGACTCCATATGTTCAAGAACAAGTTAAT
ATAGGTTCAAGTCCACCTGGGTCGAAAATCAGGTGGTTTCGTTCTTCAAG
CGATGAACCAAGGTTCATCAACACGGTTACTTTTGATAGCAAAGAGGATT
CTCCCACTCTTATAATGGTTCATGGATATGGAGCATCCCAGGGCTTCTTC
TTTCGCAATTTTGATGCTCTTGCTAGTCGTTTCAGAGTCATTGCTGTTGA
TCAACTTGGTTGCGGTGGATCAAGCAGGCCTGACTTTACGTGCAAAAGCA
CAGAAGAAACTGAAGCATGGTTTATTGATTCCTTTGAGGAATGGCGCAAA
GCCAAAAACCTCAGCAACTTCATTTTACTTGAGCATTCTCTTGGNAGGGT
ATGTGCCGCTAAATATGCTCTCAAGCATCCCGAGCATGTCCAGCACTTGA
TTTTAGTTGGACCTGCTGGGATTTCAGCTNCATCAGATGCCNAATCTGAG
TGGATTACCAGNTCANGGNCACATGGAAANGGAGCAATTTGAACCNACTG
TGGGATCTTATTTACTCACAGAAAATATCAGAGGGTTAGGCCCTGGGGTC
CAGACTGGTTCGTAATACACAATGCTAGATTGGNGCATATCCTCTGGAAA
GGATTGACAAGAAGAGCCAGTTTGCTGAAGACT
back to top