EY659751

Overview
NameEY659751
Unique NameEY659751
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2546 contig Csv1_Contig2546:118..812. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659751 vs. ExPASy Swiss-Prot
Match: CP1A1_LIMLI (Cytochrome P450 1A1 OS=Limanda limanda GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.306e-11
Identity = 43/121 (35.54%), Postives = 61/121 (50.41%), Query Frame = 2 
Query:    2 HASADAWDINGYDIPAKAQVLVNVWAMTRDSKYWTEPESFIPERFL--DSPIDFKGANFEFLPFGAGRRMCPGMTYANANIELPLAMFL--YHFDWKLPNGMKNEDLDMTEGFGVTVKRKQ 352
            H +     +NGY IP    V +N W +  D + W +P SF P+RFL  D     K    + + FG G+R C G   A   + L LA+ +   HF   LP  +  E LDMT  +G+T+K K+
Sbjct:  393 HCTTKDTSLNGYFIPKDTCVFINQWQINHDPEMWKDPSSFNPDRFLSADGSEVNKLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAILIQKLHF---LP--IPGEKLDMTPEYGLTMKHKR 508
The following BLAST results are available for this feature:
BLAST of EY659751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
CP1A1_LIMLI8.306e-1135.54Cytochrome P450 1A1 OS=Limanda limanda GN=cyp1a1 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659751 ID=EY659751; Name=EY659751; organism=Citrus sinensis; type=EST; length=695bp
CCACGCGTCCGCGGACGCGTGGGATATTAATGGATACGACATACCAGCCA
AAGCACAAGTACTTGTTAATGTATGGGCGATGACAAGAGATTCCAAATAT
TGGACTGAACCTGAGAGCTTTATTCCAGAGAGGTTCCTTGATTCTCCTAT
AGACTTTAAGGGTGCTAATTTTGAATTTCTCCCATTTGGTGCTGGTAGGA
GGATGTGCCCTGGAATGACATATGCCAATGCCAACATTGAGCTTCCACTT
GCAATGTTTTTGTACCATTTCGATTGGAAGCTACCAAATGGAATGAAGAA
TGAGGACTTAGACATGACAGAGGGATTTGGTGTGACCGTCAAAAGAAAGC
AAAATCTGTGCCTGATTCCCACCCCTTATAATCCTCCAGCTGTTGCATAA
GCTCTAGAAGGAAAAACTACAGTATAATTTTGAATAATTGTTCTCCCCAT
CATGTAGGTATGTTATGTGATGCCAGTACCGCTAATATTGCTGGGAGGGA
ATAACTCGTGTTTCTGAATAATGTTTTTGTTTCAAGCTTGGGTGAAAATT
TTATATGTAAGCTGTTCTATTCTCTTTGTTAATAGTCAGAAACAAATGCT
TCTTTACAATTCATTGTAGTTATTGATTAAAGAGAATGTCTAAGGTGAGG
CACCACCACCAGTTACATACCAAAAAAAAAAAAAAAAAAAAAAAA
back to top