EY659746
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: RRP2_SPIOL (30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.913e-26 Identity = 65/172 (37.79%), Postives = 102/172 (59.30%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN------KAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRIWMGEHQR 914 +L+VGN+P ++++++L + E+ G +EIAEV+Y++ + RSR FGFVTM TVE+A +E + +I GR + VN + T + VE +++Y+GNL V N L+ FSE GKV+ A+V T +S GFG + +SE E+ AI AL+ + G+ R Sbjct: 85 RLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFVESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIR 256
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROC2_ARATH (29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 4.074e-20 Identity = 52/93 (55.91%), Postives = 63/93 (67.74%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE---RAPR 680 D KLFVGNL ++VDS +LA LFE AG VE+ EVIY++ T RSRGFGFVTMST E E A + F+ Y+ +GR L VN P + E R PR Sbjct: 98 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190 HSP 2 Score: 80.1073 bits (196), Expect = 1.958e-14 Identity = 37/65 (56.92%), Postives = 49/65 (75.38%), Query Frame = 3 Query: 693 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDG 887 G R+YVGNL W VD+ LE +F+E GKVV ARV YDR++GRS+GFG T++S E+ AI +L+G Sbjct: 256 GNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNG 320 HSP 3 Score: 74.3294 bits (181), Expect = 1.075e-12 Identity = 36/79 (45.57%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 653 +L+VGNL + VD L LF + G V A VIY+R++ RS+GFGFVT+S+ +E +KA+ + D+DGR + V++A R Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEAR 336
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: NSR1_YEAST (Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.076e-20 Identity = 58/164 (35.37%), Postives = 90/164 (54.88%), Query Frame = 3 Query: 414 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT--VNKAAPRGTQPERAPRV----VEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDG 887 A +FVG L + +D E L FE G V A VIY R TDRSRG+G+V AEKA++ +IDGR + ++ + P G +RA + EP +++GNL + D + ++F++HG+VV+ R+ ET + +GFG ++ + A+ AL G Sbjct: 168 ATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKPAGNN-DRAKKFGDTPSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQG 330
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: PABP_DROME (Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 7.191e-17 Identity = 57/169 (33.73%), Postives = 88/169 (52.07%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVVEP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRI 893 ++V N D D EKL FE G + +V+ ++E +S+GFGFV T E AE AV+ + D+ +G+ L V +A + + + R E G +YV NL +D+ RL FS +G + +A+V D E GRS+GFG + +E A+ L+GR+ Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRV 351 HSP 2 Score: 68.5514 bits (166), Expect = 5.897e-11 Identity = 43/162 (26.54%), Postives = 82/162 (50.62%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRIWMGE 905 +F+ NL +D++ + F G + +V + E S+G+GFV T E A +++ + ++G+ + V K PR + + + +YV N + D+ +L++ F +GK+ + +V +E G+S+GFG + A+ AL+G+ MGE Sbjct: 92 VFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKV-MSKEDGKSKGFGFVAFETTEAAEAAVQALNGKD-MGE 250
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: PABP5_PONPY (Polyadenylate-binding protein 5 OS=Pongo pygmaeus GN=PABPC5 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.602e-16 Identity = 58/168 (34.52%), Postives = 89/168 (52.98%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRI 893 +FV N+ D+D EKL LF + G E +VI + + +S+GFGFV T E A+KAV H IDG++L V +A + + R E PG IY+ NL +++ +L++ FS G + A+V E G+ +GFG+ +S E A+ ++GRI Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEMNGRI 365
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: PABP5_PANTR (Polyadenylate-binding protein 5 OS=Pan troglodytes GN=PABPC5 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.602e-16 Identity = 58/168 (34.52%), Postives = 89/168 (52.98%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRI 893 +FV N+ D+D EKL LF + G E +VI + + +S+GFGFV T E A+KAV H IDG++L V +A + + R E PG IY+ NL +++ +L++ FS G + A+V E G+ +GFG+ +S E A+ ++GRI Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEMNGRI 365
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: PABP5_HYLLA (Polyadenylate-binding protein 5 OS=Hylobates lar GN=PABPC5 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.602e-16 Identity = 58/168 (34.52%), Postives = 89/168 (52.98%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRI 893 +FV N+ D+D EKL LF + G E +VI + + +S+GFGFV T E A+KAV H IDG++L V +A + + R E PG IY+ NL +++ +L++ FS G + A+V E G+ +GFG+ +S E A+ ++GRI Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEMNGRI 365
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: PABP5_HUMAN (Polyadenylate-binding protein 5 OS=Homo sapiens GN=PABPC5 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.602e-16 Identity = 58/168 (34.52%), Postives = 89/168 (52.98%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRI 893 +FV N+ D+D EKL LF + G E +VI + + +S+GFGFV T E A+KAV H IDG++L V +A + + R E PG IY+ NL +++ +L++ FS G + A+V E G+ +GFG+ +S E A+ ++GRI Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEMNGRI 365
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: PABP5_GORGO (Polyadenylate-binding protein 5 OS=Gorilla gorilla gorilla GN=PABPC5 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.602e-16 Identity = 58/168 (34.52%), Postives = 89/168 (52.98%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRI 893 +FV N+ D+D EKL LF + G E +VI + + +S+GFGFV T E A+KAV H IDG++L V +A + + R E PG IY+ NL +++ +L++ FS G + A+V E G+ +GFG+ +S E A+ ++GRI Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEMNGRI 365
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: PABP5_MACMU (Polyadenylate-binding protein 5 OS=Macaca mulatta GN=PABPC5 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.092e-16 Identity = 57/168 (33.93%), Postives = 89/168 (52.98%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRI 893 +FV N+ D+D EKL LF + G E +VI + + +S+GFGFV T E A+KAV H IDG++L V +A + + R E PG IY+ NL +++ +L++ FS G + A+V E G+ +GFG+ +S E A+ ++GR+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEMNGRV 365 The following BLAST results are available for this feature:
BLAST of EY659746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 151
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659746 ID=EY659746; Name=EY659746; organism=Citrus sinensis; type=EST; length=919bpback to top |