EY659746
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: RO31_XENLA (Heterogeneous nuclear ribonucleoprotein A3 homolog 1 OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13 Identity = 44/141 (31.21%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXT 839 KLF+G L ++ + L FE+ G + V+ + +T RSRGFGFVT S VEE + ++ + +DGR++ +A R + P +I+VG + + + L +GK+ V DR++G+ RGF T Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA-RPHKVDGRVVEPKRAVSR--EDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVT 165
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROA1_XENLA (Heterogeneous nuclear ribonucleoproteins A1 homolog OS=Xenopus laevis GN=hnrnpa1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.300e-13 Identity = 43/152 (28.29%), Postives = 76/152 (50.00%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAI 872 KLF+G L ++ E L FE+ GT+ V+ + + RSRGFGFVT + +E + A+ + +DGR++ +A R + P +I+VG + + + L + F ++GK+ + DR +G+ RGF T ++ + Sbjct: 15 KLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTA-RPHKVDGRVVEPKRAVSR--EDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIV 163
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: PABP_KLULA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Kluyveromyces lactis GN=PAB1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.228e-13 Identity = 49/165 (29.70%), Postives = 81/165 (49.09%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRIWMG 902 +A L+VG L ++ L +F G + V + T S G+ +V + E +KA++ + +I+GR + ER P + + G I++ NL +DN L + FS G+V++ +V D E G SRGFG E++ DAI A++G + G Sbjct: 49 NASLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAIQELNYAEINGRPCRI-------MWSERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVLSCKVALD-ENGNSRGFGFVHFKEESDAKDAIEAVNGMLMNG 205
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: NUCL_PONAB (Nucleolin OS=Pongo abelii GN=NCL PE=2 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 1.075e-12 Identity = 47/159 (29.56%), Postives = 82/159 (51.57%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAAL-DGRI 893 L + NL Y E L +FEKA +++ + + +S+G+ F+ ++ E+A++A+ ++ +I+GR + + PRG+ R+ +P ++V L + L++ F V AR+ DRETG S+GFG SE + A A+ DG I Sbjct: 490 LVLSNLSYSATEETLQEVFEKATFIKVPQ----NQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARS----QPSKTLFVKGLSEDTTEETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEI 637
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: NUCL_MESAU (Nucleolin OS=Mesocricetus auratus GN=NCL PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.075e-12 Identity = 47/159 (29.56%), Postives = 82/159 (51.57%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAAL-DGRI 893 L + NL Y E L +FEKA +++ + + +S+G+ F+ ++ E+A++A+ ++ +I+GR + + PRG+ R+ +P ++V L + L++ F V AR+ DRETG S+GFG SE + A A+ DG I Sbjct: 488 LVLSNLSYSATEETLQEVFEKATFIKVPQ----NQQGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGPRGSPNARS----QPSKTLFVKGLSEDTTEETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEI 635
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: NUCL_MACFA (Nucleolin OS=Macaca fascicularis GN=NCL PE=2 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 1.075e-12 Identity = 47/159 (29.56%), Postives = 82/159 (51.57%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAAL-DGRI 893 L + NL Y E L +FEKA +++ + + +S+G+ F+ ++ E+A++A+ ++ +I+GR + + PRG+ R+ +P ++V L + L++ F V AR+ DRETG S+GFG SE + A A+ DG I Sbjct: 489 LVLSNLSYSATEETLQEVFEKATFIKVPQ----NQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARS----QPSKTLFVKGLSEDTTEETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEI 636
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: NUCL_HUMAN (Nucleolin OS=Homo sapiens GN=NCL PE=1 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 1.075e-12 Identity = 47/159 (29.56%), Postives = 82/159 (51.57%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAAL-DGRI 893 L + NL Y E L +FEKA +++ + + +S+G+ F+ ++ E+A++A+ ++ +I+GR + + PRG+ R+ +P ++V L + L++ F V AR+ DRETG S+GFG SE + A A+ DG I Sbjct: 488 LVLSNLSYSATEETLQEVFEKATFIKVPQ----NQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARS----QPSKTLFVKGLSEDTTEETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEI 635
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: SXL_MUSDO (Sex-lethal homolog OS=Musca domestica GN=SXL PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.403e-12 Identity = 45/164 (27.44%), Postives = 77/164 (46.95%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRIWMGEHQ 911 L V LP D+ +L LF G + ++ + +T S G+ FV ++ +A+ A++ + + + L V+ A P G + +YV NLP + + LE++F ++G +V + D+ TGR RG E +AI+AL+ I G Q Sbjct: 104 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNGITVRNKRLKVSYARPGGESIKDT--------NLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGASQ 259
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: SXL_CHRRU (Sex-lethal homolog OS=Chrysomya rufifacies GN=SXL PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.394e-12 Identity = 44/164 (26.83%), Postives = 77/164 (46.95%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRIWMGEHQ 911 L V LP D+ +L LF G + ++ + +T S G+ FV ++ +A+ A++ + + + L V+ A P G + +YV NLP + + LE++F ++G +V + D+ TG+ RG E +AI+AL+ I G Q Sbjct: 87 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNGVTVRNKRLKVSYARPGGESIKDT--------NLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVIPEGASQ 242
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: SF3B4_CAEEL (Splicing factor 3B subunit 4 OS=Caenorhabditis elegans GN=sap-49 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.394e-12 Identity = 49/161 (30.43%), Postives = 81/161 (50.31%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNA-RVXYDRETGRSRGFGLXTMASETELNDAIAALDGR 890 DA ++VG L V L L +AG V + +R T +GFGFV E+A+ A+++ + + G+ + VNKA+ + ++ G I+VGNL EVD L FS G ++ ++ D ++G S+GF AS + A+ A++G+ Sbjct: 12 DATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAH-------EKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQ 165 The following BLAST results are available for this feature:
BLAST of EY659746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 151
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659746 ID=EY659746; Name=EY659746; organism=Citrus sinensis; type=EST; length=919bpback to top |