EY659746
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11 Identity = 43/140 (30.71%), Postives = 74/140 (52.86%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRET 809 +++ N+ +V E+ +FEK G + A + ++E +SRGFGFV ST + A+ AV+ + +I G+ L V +A + + E + E G +YV NL +VD+ +L ++FS G + +A+V D T Sbjct: 235 VYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQE-GKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVT 373
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: HNRDL_MOUSE (Heterogeneous nuclear ribonucleoprotein D-like OS=Mus musculus GN=Hnrpdl PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11 Identity = 42/165 (25.45%), Postives = 76/165 (46.06%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRIWMGE 905 D K+F+G L +D + L + G V + + T RSRGFGFV +K +E+ + +DG+L+ +A +A + EP +++VG L + ++++ F G++ N + D +T RGF T E + + + +I G+ Sbjct: 28 DGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL-KEHKLDGKLIDPKRA--------KALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGK 183
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: HNRDL_HUMAN (Heterogeneous nuclear ribonucleoprotein D-like OS=Homo sapiens GN=HNRPDL PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11 Identity = 42/165 (25.45%), Postives = 76/165 (46.06%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRIWMGE 905 D K+F+G L +D + L + G V + + T RSRGFGFV +K +E+ + +DG+L+ +A +A + EP +++VG L + ++++ F G++ N + D +T RGF T E + + + +I G+ Sbjct: 147 DGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL-KEHKLDGKLIDPKRA--------KALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGK 302
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: RBPA_SYNY3 (Putative RNA-binding protein rbpA OS=Synechocystis sp. (strain PCC 6803) GN=rbpA PE=3 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 3.457e-11 Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 3 Query: 702 IYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRIWMG 902 IYVGNL ++V A L VF+E+G V ++ DRETGR RGFG + ++ E AI ALDG WMG Sbjct: 3 IYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEALDGAEWMG 69
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: RBM19_HUMAN (Probable RNA-binding protein 19 OS=Homo sapiens GN=RBM19 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.457e-11 Identity = 49/165 (29.70%), Postives = 81/165 (49.09%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETD---RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP-------ERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRE-TGRSRGFGLXTMASETELNDAIAAL 881 LF+ NL +D EKL +F K GTV+ + + S GFGFV E+A+KA++ + +DG L V + + R T+P ++ PR + +I V N+P++ + + ++FS G++ R+ TG RGFG ++ + A AL Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEV-RISERATKPAVTLARKKQVPR-KQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNAL 894
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: RB97D_DROME (Ribonucleoprotein RB97D OS=Drosophila melanogaster GN=Rb97D PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.457e-11 Identity = 48/153 (31.37%), Postives = 74/153 (48.37%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAI 872 KLF+G L E L + + + G V V+ + T RSRGFGF+T + ++A E + IDG+ + +A PR PER R +++VG L D L + F + G VV+ ++ D+ TG+ RGF ++ AI Sbjct: 33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQEN-RPHIIDGKTVEAKRALPR---PERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: CIRBP_PONAB (Cold-inducible RNA-binding protein OS=Pongo abelii GN=CIRBP PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.457e-11 Identity = 35/97 (36.08%), Postives = 53/97 (54.64%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFR 701 + KLFVG L +D + + L +F K G + V+ +RET RSRGFGFVT +++A+ A+ + +DGR + V++A R R G R Sbjct: 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGR 101
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: CIRBP_HUMAN (Cold-inducible RNA-binding protein OS=Homo sapiens GN=CIRBP PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.457e-11 Identity = 35/97 (36.08%), Postives = 53/97 (54.64%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFR 701 + KLFVG L +D + + L +F K G + V+ +RET RSRGFGFVT +++A+ A+ + +DGR + V++A R R G R Sbjct: 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGR 101
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: PABP_EMENI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11 Identity = 43/138 (31.16%), Postives = 74/138 (53.62%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETD-RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYD 800 +++ N+ +V+ E+ LFEK G EI +R+++ +SRGFGFV ST E A+ AVE + ++ + L V +A + + E + E G +YV NL +VD+ +L ++F +G + +A+V D Sbjct: 225 IYIKNIDPEVEDEEFRKLFEKFG--EITSATLSRDSEGKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDVDDDKLRELFGPYGTITSAKVMRD 360
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11 Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 653 + FVG L + D + L F K G V +++I +RET RSRGFGFVT ++ E +A+E + D+DGR +TVN+A R Sbjct: 7 RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQSR 85 HSP 2 Score: 68.5514 bits (166), Expect = 5.897e-11 Identity = 29/65 (44.62%), Postives = 45/65 (69.23%), Query Frame = 3 Query: 696 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGR 890 +R +VG L W D+ L+ FS++G V+++++ DRETGRSRGFG T AS+ + AI A++G+ Sbjct: 6 YRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQ 70 The following BLAST results are available for this feature:
BLAST of EY659746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 151
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659746 ID=EY659746; Name=EY659746; organism=Citrus sinensis; type=EST; length=919bpback to top |