EY659746
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: EPAB_XENTR (Embryonic polyadenylate-binding protein OS=Xenopus tropicalis GN=epabp PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.569e-16 Identity = 54/168 (32.14%), Postives = 87/168 (51.79%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRI 893 +++ N D+D ++L +F G +V+ + +T RSRGFGFV EEA+KAV + +++GR++ V +A R + R E G +YV NL +D+ RL + FS +G + +A+V E G S+GFG +S E A+ ++GRI Sbjct: 193 VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRI 357 HSP 2 Score: 71.633 bits (174), Expect = 6.965e-12 Identity = 46/171 (26.90%), Postives = 84/171 (49.12%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGR------IWMGEHQR 914 +F+ NL +D++ L F G + +V+ + SRG+GFV T E A +A++ + ++ R + V R + V +Y+ N ++D+ RL ++FS G ++ +V D +TGRSRGFG + E A++ ++G+ I++G Q+ Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQK 268
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: GAR2_SCHPO (Protein gar2 OS=Schizosaccharomyces pombe GN=gar2 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15 Identity = 48/151 (31.79%), Postives = 80/151 (52.98%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER---------APRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMA 845 +FVG L ++VD + L FE+ GT+ A VI + ++ RS+G+G+V T E A+ AV +IDGR++ ++ + PR P+ ++ EP ++VGNL + L F G + + R+ D ++GR +GFG T + Sbjct: 265 VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLSNPRPANPQPYAQQRAGNFGDQLSEPSDTVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFS 415
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ELAV2_XENTR (ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl2 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15 Identity = 47/157 (29.94%), Postives = 80/157 (50.96%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGR 890 L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AEKA+ + + + + V+ A P A +YV LP + LEQ+FS++G+++ +R+ D+ TG SRG G E +AI L+G+ Sbjct: 69 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 217
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ELAV2_PONAB (ELAV-like protein 2 OS=Pongo abelii GN=ELAVL2 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15 Identity = 47/157 (29.94%), Postives = 80/157 (50.96%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGR 890 L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AEKA+ + + + + V+ A P A +YV LP + LEQ+FS++G+++ +R+ D+ TG SRG G E +AI L+G+ Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ELAV2_MOUSE (ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15 Identity = 47/157 (29.94%), Postives = 80/157 (50.96%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGR 890 L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AEKA+ + + + + V+ A P A +YV LP + LEQ+FS++G+++ +R+ D+ TG SRG G E +AI L+G+ Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ELAV2_HUMAN (ELAV-like protein 2 OS=Homo sapiens GN=ELAVL2 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 1.038e-15 Identity = 47/157 (29.94%), Postives = 80/157 (50.96%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGR 890 L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AEKA+ + + + + V+ A P A +YV LP + LEQ+FS++G+++ +R+ D+ TG SRG G E +AI L+G+ Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: PAP1L_HUMAN (Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15 Identity = 56/168 (33.33%), Postives = 85/168 (50.60%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRI 893 ++V NLP DVD + L LF + G + +V+ + + SR FGFV EEA+KAV + ++ GRLL +A R + R E G +YV NL +D+ +L + FS +G + +A+V E G S+GFG +S E A+ ++GRI Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRI 357
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15 Identity = 53/168 (31.55%), Postives = 89/168 (52.98%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRI 893 +++ N D+D E+L LF K G +V+ + E+ +S+GFGFV+ E+A+KAV+ + +++G+ + V +A + + R E G +YV NL +D+ RL + FS G + +A+V E GRS+GFG +S E A+ ++GRI Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357 HSP 2 Score: 68.5514 bits (166), Expect = 5.897e-11 Identity = 42/171 (24.56%), Postives = 87/171 (50.88%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGR------IWMGEHQR 914 +F+ NL +D++ L F G + +V+ + + S+G+GFV T E AE+A+E + ++ R + V + R + + +Y+ N ++D+ RL+++F + G ++ +V D E+G+S+GFG + + A+ ++G+ I++G Q+ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15 Identity = 53/168 (31.55%), Postives = 89/168 (52.98%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRI 893 +++ N D+D E+L LF K G +V+ + E+ +S+GFGFV+ E+A+KAV+ + +++G+ + V +A + + R E G +YV NL +D+ RL + FS G + +A+V E GRS+GFG +S E A+ ++GRI Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: HRP1_YEAST (Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae GN=HRP1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15 Identity = 46/144 (31.94%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMAS 848 K+F+G L +D + L F K GTV +++ + T RSRGFGF++ ++ V+ H +DG+++ +A PR Q + +I+VG + +V E+ FS+ G +++A++ D++TG+SRGFG T S Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQH--ILDGKVIDPKRAIPRDEQDKTG--------KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDS 293 The following BLAST results are available for this feature:
BLAST of EY659746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 151
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659746 ID=EY659746; Name=EY659746; organism=Citrus sinensis; type=EST; length=919bpback to top |