EY659746
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ELAV4_MOUSE (ELAV-like protein 4 OS=Mus musculus GN=Elavl4 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.021e-15 Identity = 46/157 (29.30%), Postives = 79/157 (50.32%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGR 890 L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AEKA+ + + + + V+ A P A +YV LP + LEQ+FS++G+++ +R+ D+ TG SRG G E +AI L+G+ Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 201
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ELAV4_HUMAN (ELAV-like protein 4 OS=Homo sapiens GN=ELAVL4 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 3.021e-15 Identity = 46/157 (29.30%), Postives = 79/157 (50.32%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGR 890 L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AEKA+ + + + + V+ A P A +YV LP + LEQ+FS++G+++ +R+ D+ TG SRG G E +AI L+G+ Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 196
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ELAV3_HUMAN (ELAV-like protein 3 OS=Homo sapiens GN=ELAVL3 PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 3.021e-15 Identity = 45/161 (27.95%), Postives = 81/161 (50.31%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRIWMG 902 L V LP ++ ++ LF G +E +++ ++ T +S G+GFV S +A+KA+ + + + + V+ A P A +YV LP + +EQ+FS++G+++ +R+ D+ TG SRG G E +AI L+G+ +G Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLG 193
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROA1_RAT (Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus GN=Hnrnpa1 PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15 Identity = 47/141 (33.33%), Postives = 75/141 (53.19%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXT 839 KLF+G L ++ E L FE+ GT+ V+ + T RSRGFGFVT +TVEE + A+ + +DGR++ +A R + + P +I+VG + + + L F ++GK+ + DR +G+ RGF T Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVT 152
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROA1_PANTR (Heterogeneous nuclear ribonucleoprotein A1 OS=Pan troglodytes GN=HNRNPA1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15 Identity = 47/141 (33.33%), Postives = 75/141 (53.19%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXT 839 KLF+G L ++ E L FE+ GT+ V+ + T RSRGFGFVT +TVEE + A+ + +DGR++ +A R + + P +I+VG + + + L F ++GK+ + DR +G+ RGF T Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVT 152
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROA1_MOUSE (Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus GN=Hnrnpa1 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15 Identity = 47/141 (33.33%), Postives = 75/141 (53.19%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXT 839 KLF+G L ++ E L FE+ GT+ V+ + T RSRGFGFVT +TVEE + A+ + +DGR++ +A R + + P +I+VG + + + L F ++GK+ + DR +G+ RGF T Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVT 152
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROA1_HUMAN (Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens GN=HNRNPA1 PE=1 SV=5) HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15 Identity = 47/141 (33.33%), Postives = 75/141 (53.19%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXT 839 KLF+G L ++ E L FE+ GT+ V+ + T RSRGFGFVT +TVEE + A+ + +DGR++ +A R + + P +I+VG + + + L F ++GK+ + DR +G+ RGF T Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVT 152
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROA1_BOVIN (Heterogeneous nuclear ribonucleoprotein A1 OS=Bos taurus GN=HNRNPA1 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15 Identity = 47/141 (33.33%), Postives = 75/141 (53.19%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXT 839 KLF+G L ++ E L FE+ GT+ V+ + T RSRGFGFVT +TVEE + A+ + +DGR++ +A R + + P +I+VG + + + L F ++GK+ + DR +G+ RGF T Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVT 152
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: RB27C_DROME (Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster GN=Hrb27C PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15 Identity = 50/162 (30.86%), Postives = 80/162 (49.38%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETEL----NDAIAALDGR 890 KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT + ++ + +DGR + PR Q + G+++++G LP V L F+ +GKV + YD+E +SRGFG + E+ + N+ L+G+ Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG----GYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGK 164
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: RA1L3_HUMAN (Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3 OS=Homo sapiens GN=HNRPA1L3 PE=5 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.946e-15 Identity = 47/141 (33.33%), Postives = 75/141 (53.19%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXT 839 KLF+G L ++ E L FE+ GT+ V+ + T RSRGFGFVT +TVEE + A+ + +DGR++ +A R + + P +I+VG + + + L F ++GK+ + DR +G+ RGF T Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVT 152 The following BLAST results are available for this feature:
BLAST of EY659746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 151
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659746 ID=EY659746; Name=EY659746; organism=Citrus sinensis; type=EST; length=919bpback to top |