EY659746
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.658e-13 Identity = 49/168 (29.17%), Postives = 86/168 (51.19%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRI 893 ++V NLP ++ ++L F K G + A V+ ++ SR FGFV E A AVE + + +L V +A + + E R E G +Y+ NL VD+ +L+++FSE+G V +++V + + G SRGFG ++ E A++ ++G++ Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSA-VVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGKM 396
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: DAZP1_HUMAN (DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.658e-13 Identity = 51/162 (31.48%), Postives = 71/162 (43.83%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA---------PRVVEP-GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAI 872 KLFVG L + E L F + G V ++ ++ T++SRGFGFV V + +DGR + PRG QPER PR +I+VG +P L + F + G V + YD E R RGFG T E ++ A+ Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD-PNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROA0_HUMAN (Heterogeneous nuclear ribonucleoprotein A0 OS=Homo sapiens GN=HNRNPA0 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13 Identity = 48/138 (34.78%), Postives = 71/138 (51.45%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFG 830 KLF+G L L FE GT+ V+ N +T RSR FGFVT S VEEA+ A+ + +DG + + +A R + P +++VG L +V L + FS+ G V A + D+++G+ RGFG Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA-SPHAVDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFG 142
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: RB87F_DROME (Heterogeneous nuclear ribonucleoprotein 87F OS=Drosophila melanogaster GN=Hrb87F PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13 Identity = 47/140 (33.57%), Postives = 74/140 (52.86%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMS---TVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGF 827 KLF+G L Y + L FEK G + V+ + +T RSRGFGF+T S ++ A+ A + IDGR + +A PR Q +P +++VG L + D L + F + G++V+ + D++TG+ RGF Sbjct: 25 KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNA----RPHKIDGRTVEPKRAVPR--QEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGF 158
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ELV1B_XENLA (ELAV-like protein 1-B OS=Xenopus laevis GN=elavl1-B PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13 Identity = 44/156 (28.21%), Postives = 76/156 (48.72%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDG 887 L V LP ++ ++L LF G VE A++I ++ S G+GFV ++AE+A+ + + + + V+ A P + A +Y+ LP + +E +F G ++N+RV D+ TG SRG +E +AIA+ +G Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSFARPSSETIKDA--------NLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNG 169
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: PABP_SCHPO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Schizosaccharomyces pombe GN=pab1 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.828e-13 Identity = 47/172 (27.33%), Postives = 89/172 (51.74%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRIWMGE 905 +++ NL ++ ++ + LF + G + ++ + + D+ RGFGFV + E A+KAV+ + + G+ L V +A + + E + E G +++ NL EVD+ RL+ FS G + +A++ D E G+S+GFG + E N A+ ++ R+ G+ Sbjct: 263 VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKD-QNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTD-EQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGK 432
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: SF3B4_RAT (Splicing factor 3B subunit 4 OS=Rattus norvegicus GN=Sf3b4 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.693e-13 Identity = 48/161 (29.81%), Postives = 84/161 (52.17%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNA-RVXYDRETGRSRGFGLXTMASETELNDAIAALDGR 890 DA ++VG L V L LF +AG V + +R T + +G+GFV + E+A+ A+++ + + G+ + VNKA+ + ++ G I++GNL E+D L FS G ++ ++ D +TG S+G+ AS + AI A++G+ Sbjct: 12 DATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHN-------KNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: SF3B4_MOUSE (Splicing factor 3B subunit 4 OS=Mus musculus GN=Sf3b4 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.693e-13 Identity = 48/161 (29.81%), Postives = 84/161 (52.17%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNA-RVXYDRETGRSRGFGLXTMASETELNDAIAALDGR 890 DA ++VG L V L LF +AG V + +R T + +G+GFV + E+A+ A+++ + + G+ + VNKA+ + ++ G I++GNL E+D L FS G ++ ++ D +TG S+G+ AS + AI A++G+ Sbjct: 12 DATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHN-------KNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: SF3B4_HUMAN (Splicing factor 3B subunit 4 OS=Homo sapiens GN=SF3B4 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.693e-13 Identity = 48/161 (29.81%), Postives = 84/161 (52.17%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNA-RVXYDRETGRSRGFGLXTMASETELNDAIAALDGR 890 DA ++VG L V L LF +AG V + +R T + +G+GFV + E+A+ A+++ + + G+ + VNKA+ + ++ G I++GNL E+D L FS G ++ ++ D +TG S+G+ AS + AI A++G+ Sbjct: 12 DATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHN-------KNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: PABP_USTMA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.693e-13 Identity = 47/168 (27.98%), Postives = 82/168 (48.81%), Query Frame = 3 Query: 420 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRI 893 ++ N+ +V ++ LF K G + V+ E +S+GFGFV EA+KAV+ H D G+ L V +A + + E R E G +Y+ N+P D+ RL + F+ G + + ++ +G SRGFG ++ E N A++ ++G++ Sbjct: 229 VYAKNVDPEVTDDEFEKLFTKFGKITSC-VLQRDEDGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLREEFAPFGAITSCKI-MRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKM 394 The following BLAST results are available for this feature:
BLAST of EY659746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 151
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659746 ID=EY659746; Name=EY659746; organism=Citrus sinensis; type=EST; length=919bpback to top |