EY659744

Overview
NameEY659744
Unique NameEY659744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9803 contig Csv1_Contig9803:27..968. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.310e-41
Identity = 99/243 (40.74%), Postives = 142/243 (58.44%), Query Frame = 2
Query:  164 GEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSR-------VRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868
            G+   QY L+ + +L+    +      RLE ++  + S        VR L+ E++ L+ P   VG V  ++   +V+VK     K+VV            P  RVAL   +  +  +LP+  DP+V   +VE+ P+ +Y+ IGGLD QI+EI+E +ELP+  PELF  +GI  PKGVLLYGPPGTGKTLLA+AVA+ T  TFIR  GS   QKYIGEG+R+ R++F + +       F+DE+D
Sbjct:    2 GDSEIQYLLEKLKKLEEDYYKLRELYRRLEDEKKFIESERIRYEREVRRLRSEVERLRSPPLLVGVVSDILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELD 244          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.631e-41
Identity = 97/238 (40.76%), Postives = 137/238 (57.56%), Query Frame = 2
Query:  179 QYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSR-------VRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868
            +Y L  + +L+ +  +      ++E ++  + ++       +R L  EL  L+ P   VG ++ VM   K+++K     K+VV            P  +VAL   S  +  +LP+  DP V  M+V   P+  Y  IGGL+ QI E+KE +ELP+  PELF+ +GI  PKGVLLYGPPGTGKTLLA+AVA+ T  TFIR  GS L QKYIGEG+RM R+LF + +       F+DEID
Sbjct:   25 KYLLDRVKQLEERNVRLKEEYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLIVGTILDVMANGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEID 262          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 6.243e-40
Identity = 92/223 (41.26%), Postives = 129/223 (57.85%), Query Frame = 2
Query:  203 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868
            EL+ Q+RQ   +   +E Q+      VR LK E++ L+ P   VG +  ++   +V+V+     +++V               R  L   S  +  +LPS  D  V  M++   P  TY+ IGGL++QI EI+E +ELP+  P+LFE +GI  PKGVLLYGPPGTGKTLLA+AVAH T   F+   GS L QKYIGEG+R+ R+LF + +       F+DEID
Sbjct:   34 ELKEQIRQLESDKRYIETQKIRYEREVRKLKSEIEHLKTPPLIVGTITDIIDSGRVVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAHETHAIFLHTVGSELVQKYIGEGARLVRELFDLAKEKAPSIVFIDEID 256          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 5.285e-39
Identity = 91/225 (40.44%), Postives = 134/225 (59.56%), Query Frame = 2
Query:  197 IHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868
            I EL+ ++ +       LE +  +L     +L+ EL  ++ P   VG VV  +G+ KV+VK      ++V            P  RV L   +  +  +LP   D     M+V++ P+  Y+ IGGL++Q++EI+EV+ELP+KHPELFE +GI  PKG+LLYGPPGTGKTLLA+AVA  T+ TFIR  GS L +K+IGEG+ + + +F + +       F+DEID
Sbjct:   49 IAELESRILKLELEKKELERENLQLMKENEILRRELDRMRVPPLIVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEID 273          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.008e-38
Identity = 90/222 (40.54%), Postives = 135/222 (60.81%), Query Frame = 2
Query:  212 LQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFR---KLFVWQGTCSVYHFMDEID 868
            L++  K  ++NR   Q  + N    +LK EL  L+ P   +G ++  + + K +VK      ++V            P  RV L   +  +  +LP + D     M++E+ PD +++ IGGL+ QI++IKEV+ELP+K+PELFE +GI  PKGVLLYGPPGTGKTLLA+AVA+ T+ +F+R  GS L +K+IGEG+++ R   KL   +  C +  F+DEID
Sbjct:   35 LRLELKNKDINRENVQIKKENE---ILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCII--FIDEID 251          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.623e-38
Identity = 89/192 (46.35%), Postives = 116/192 (60.42%), Query Frame = 2
Query:  314 QEPGSYVGEVVKVMGKNK----VLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLFVWQGT---CSVYHFMDEID 868
            QE    V    K++  +K     L+ V    K+VV               RV +  + Y +HL LP+K+DP V +M+VE+ PD TY  +GG   QI++++EV+E P+ HPE + +LGI  PKGVLLYGPPGTGKTL ARAVA+ TD  FIR  GS L QKY+GEG+RM R+LF    T   C +  F DEID
Sbjct:   91 QEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDEID 280          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.474e-38
Identity = 96/240 (40.00%), Postives = 135/240 (56.25%), Query Frame = 2
Query:  185 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLFVWQGT---CSVYHFMDEID 868
            Y + I +++  ++Q    +N L    E+        +  L  + Q LQ E    V    K++  +    K ++ V    K+VV               RV +  + Y +H+ LP K+DP V +M+VE+ PD TY  +GG  +QI++++EV+E P+ HPE F +LGI  PKGVLL+GPPGTGKTL ARAVA+ TD  FIR  GS L QKY+GEG+RM R+LF    T   C +  F DEID
Sbjct:   41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDEID 278          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.474e-38
Identity = 94/240 (39.17%), Postives = 134/240 (55.83%), Query Frame = 2
Query:  185 YLQHIHELQLQVRQKTHNLNRLEAQRNE-----LNSRVRMLKEELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLFVW---QGTCSVYHFMDEID 868
            Y  HI + + +V+     +N L   +         S+  ++ ++  + +E    V    K++  N    K ++ V    K+VV               RV +  + Y + + LP K+DP V +M VE+ PD TY+ +GG  +QI++++EV+ELP+ HPE F  LGI  PKGVL YGPPGTGKTLLARAVA+ TD  FIR  GS L QKY+GEG+RM R+LF     +  C V  F DE+D
Sbjct:   33 YSTHIKKAEKEVKDLAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV--FFDEVD 270          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5)

HSP 1 Score: 158.688 bits (400), Expect = 4.474e-38
Identity = 96/240 (40.00%), Postives = 135/240 (56.25%), Query Frame = 2
Query:  185 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLFVWQGT---CSVYHFMDEID 868
            Y + I +++  ++Q    +N L    E+        +  L  + Q LQ E    V    K++  +    K ++ V    K+VV               RV +  + Y +H+ LP K+DP V +M+VE+ PD TY  +GG  +QI++++EV+E P+ HPE F +LGI  PKGVLL+GPPGTGKTL ARAVA+ TD  FIR  GS L QKY+GEG+RM R+LF    T   C +  F DEID
Sbjct:   41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDEID 278          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 4.474e-38
Identity = 96/240 (40.00%), Postives = 135/240 (56.25%), Query Frame = 2
Query:  185 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLFVWQGT---CSVYHFMDEID 868
            Y + I +++  ++Q    +N L    E+        +  L  + Q LQ E    V    K++  +    K ++ V    K+VV               RV +  + Y +H+ LP K+DP V +M+VE+ PD TY  +GG  +QI++++EV+E P+ HPE F +LGI  PKGVLL+GPPGTGKTL ARAVA+ TD  FIR  GS L QKY+GEG+RM R+LF    T   C +  F DEID
Sbjct:   41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI--FFDEID 278          
The following BLAST results are available for this feature:
BLAST of EY659744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 344
Match NameE-valueIdentityDescription
PSMR_ARCFU3.310e-4140.74Proteasome-activating nucleotidase OS=Archaeoglobu... [more]
PSMR_UNCMA9.631e-4140.76Proteasome-activating nucleotidase OS=Uncultured m... [more]
PSMR_METHJ6.243e-4041.26Proteasome-activating nucleotidase OS=Methanospiri... [more]
PSMR_METJA5.285e-3940.44Proteasome-activating nucleotidase OS=Methanocaldo... [more]
PSMR_METMP2.008e-3840.54Proteasome-activating nucleotidase OS=Methanococcu... [more]
PRS7_CAEEL2.623e-3846.3526S protease regulatory subunit 7 OS=Caenorhabditi... [more]
PRS7_XENLA4.474e-3840.0026S protease regulatory subunit 7 OS=Xenopus laevi... [more]
PRS7_PRUPE4.474e-3839.1726S protease regulatory subunit 7 OS=Prunus persic... [more]
PRS7_MOUSE4.474e-3840.0026S protease regulatory subunit 7 OS=Mus musculus ... [more]
PRS7_MACFA4.474e-3840.0026S protease regulatory subunit 7 OS=Macaca fascic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659744 ID=EY659744; Name=EY659744; organism=Citrus sinensis; type=EST; length=940bp
TTTCGTCAACCCACGCGTCCGAGACTTGATTCGCAAGACAATTAGATTCG
AACAAATCGAACTCGTTCACTCGGAAAGAATGGCCGCTGTAGCAATCGAA
ACGAAGCAGCCGGAATCGGCGGCGCCAGAGGAGGTGTGTGCGGCGAAAGG
AGCATCGAAACAAGGAGAGGGATTGAGGCAATACTACCTCCAACACATTC
ACGAACTCCAGCTCCAAGTCCGTCAAAAAACCCACAATCTCAATCGCCTC
GAAGCCCAGCGTAACGAACTCAATTCTAGAGTGCGGATGCTTAAAGAAGA
ATTACAGCTTCTTCAAGAGCCTGGATCCTATGTCGGTGAAGTTGTTAAAG
TTATGGGAAAAAATAAGGTTCTTGTTAAGGTTCATCCTGAGGGGAAATAT
GTTGTTGATATTGATAAAAGTATTGATATAACCAAGATCACTCCGTCAAC
AAGAGTTGCACTTCGTAATGACAGCTATGTTCTTCATTTGATCCTGCCAA
GCAAAGTAGATCCCCTGGTCAACCTTATGAAGGTTGAAAAGGTCCCTGAT
TCTACATATGACATGATTGGTGGCCTTGATCAGCAAATTAAGGAGATCAA
GGAGGTCATTGAGCTTCCTATCAAACATCCCGAATTGTTCGAGTCTCTTG
GAATAGCTCAACCCAAGGGTGTATTGCTATATGGACCACCTGGTACTGGC
AAAACACTGTTGGCTAGAGCTGTGGCTCATCATACTGATTGTACTTTCAT
CAGGGGTTCTGGGTCTGGATTAGGCCAGAAATACATTGGAGAAGGCTCCA
GAATGTTTAGAAAACTTTTTGTATGGCAAGGGACATGCTCCGTCTATCAT
TTTATGGATGAAATTGACGGATTCGATCTGCCCGAATGAATTCTGCCACC
GAAATGGGGACAGGGAGGGCCAAAGACTTGCCGGACCTCC
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