EY659744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: VPS4B_HUMAN (Vacuolar protein sorting-associated protein 4B OS=Homo sapiens GN=VPS4B PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.570e-11 Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = 2 Query: 545 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVA-HHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF--VWQGTCSVYHFMDEID 868 P+ + + GL+ + +KE + LPIK P LF G P +G+LL+GPPGTGK+ LA+AVA + TF S S L K++GE ++ + LF + S+ F+DEID Sbjct: 129 PNVKWSDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSII-FIDEID 237
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: VPS4B_BOVIN (Vacuolar protein sorting-associated protein 4B OS=Bos taurus GN=VPS4B PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.570e-11 Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = 2 Query: 545 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVA-HHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF--VWQGTCSVYHFMDEID 868 P+ + + GL+ + +KE + LPIK P LF G P +G+LL+GPPGTGK+ LA+AVA + TF S S L K++GE ++ + LF + S+ F+DEID Sbjct: 129 PNVKWSDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSII-FIDEID 237
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: SPAST_BRUMA (Probable spastin homolog Bm1_53365 OS=Brugia malayi GN=Bm1_53365 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.089e-11 Identity = 46/122 (37.70%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 512 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVAHHTDCT-FIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868 PL+N ++ D I G + + ++E + LP +P LF G+ QP +G+LL+GPPG GKTLLARAVA T F+ S + L K++G+ ++ R LF + + F+DEID Sbjct: 164 PLLN--EILNQDDVKMSDIIGAETAKRALEETVILPTVNPSLFS--GLRQPAQGILLFGPPGNGKTLLARAVAGECGSTMFLNVSAASLTSKWVGDAEKIVRALFQIARNGQPTIIFIDEID 281
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.952e-11 Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = 2 Query: 548 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLFVW---QGTCSVYHFMDEID 868 D + + G ++ EI E + +K+P+ ++ LG PKG +L GPPGTGKTLLA+A A + FI +GS + ++G G R +F C + F+DEID Sbjct: 296 DVRFADVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCIL--FIDEID 402 The following BLAST results are available for this feature:
BLAST of EY659744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 344
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659744 ID=EY659744; Name=EY659744; organism=Citrus sinensis; type=EST; length=940bpback to top |