EY659744

Overview
NameEY659744
Unique NameEY659744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9803 contig Csv1_Contig9803:27..968. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.880e-36
Identity = 86/223 (38.57%), Postives = 126/223 (56.50%), Query Frame = 2
Query:  203 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868
            E+QL VR     +  L+ +   L   +   K E++ +  P      V+ V+   +VLV+       VV            P   VAL      +  +LP K DP+V  M++ + P+ TY  IGGL++QIKE++EV+ELP+K PE+F  +G+  PKGVLLYGPPGTGKT+LA+AVA  ++  FI    S   QK++GEG+R+ R+LF + +       F+DEID
Sbjct:   16 EVQL-VRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEID 237          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.880e-36
Identity = 89/223 (39.91%), Postives = 126/223 (56.50%), Query Frame = 2
Query:  203 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868
            E  +++R     +  L  ++  L   +   K E+  L  P      V++V+  N+V+VK       +V            P   VAL N    +  +LP + DPLV  M+VE+ P   +  +GGL++QI+EI E + LPIK+P LF  LGI  PKGVLL+GPPGTGKTLLA+AVA  T+ TFIR  GS L  K+IGEG+R+ R++F + +       F+DEID
Sbjct:   20 ERDVEIRILKDKVRSLTKEKISLQKELEYYKNEITKLLSPPYIEAVVLEVIDDNRVVVKSSTGPNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEID 242          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.880e-36
Identity = 90/237 (37.97%), Postives = 132/237 (55.70%), Query Frame = 2
Query:  161 QGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868
            + E ++ Y L     +Q Q R K     R E +R +++            L+     VG + +++     +V  +   ++ V            P   V L + ++ +  +L    DP+V++MK+EK P  TY  +GGLDQQI+EIKE +ELP+ HPE +E +GI  PKGV+LYG PGTGKTLLA+AVA+ T  TF+R  GS L QKY+G+G +M R+LF V +       F+DEID
Sbjct:   67 KSERIKDYLLMEQEFIQNQERLKPQE-ERQEEERAKVDE-----------LRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEID 291          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.880e-36
Identity = 97/256 (37.89%), Postives = 138/256 (53.91%), Query Frame = 2
Query:  104 KQPESAAPEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868
            K PE+AA           K    LR   L+ I +  L   +   N  RL+ Q  +        + ++  L+     VG + +++ +N  +V      +Y V            P   + + N    +  IL  +VDP+V++MKVEK P  +Y  IGGL+ QI+EIKE +ELP+ HPEL+E +GI  PKGV+LYG PGTGKTLLA+AVA+ T  TF+R  GS L QKY+G+G ++ R+LF V         F+DEID
Sbjct:   44 KGPEAAARLPTVTPSTKCK----LRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEED----RSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEID 291          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.880e-36
Identity = 97/256 (37.89%), Postives = 138/256 (53.91%), Query Frame = 2
Query:  104 KQPESAAPEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868
            K PE+AA           K    LR   L+ I +  L   +   N  RL+ Q  +        + ++  L+     VG + +++ +N  +V      +Y V            P   + + N    +  IL  +VDP+V++MKVEK P  +Y  IGGL+ QI+EIKE +ELP+ HPEL+E +GI  PKGV+LYG PGTGKTLLA+AVA+ T  TF+R  GS L QKY+G+G ++ R+LF V         F+DEID
Sbjct:   44 KGPEAAARLPTVTPSTKCK----LRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEED----RSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEID 291          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.206e-36
Identity = 101/264 (38.26%), Postives = 143/264 (54.17%), Query Frame = 2
Query:   98 ETKQPESAA------PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868
            +TK P++A+      P   C  K      E ++ Y L     ++ Q + K      LE ++ E  S+V  L+        P S VG + +++  N  +V      ++ V            P   V L +  + +  +L    DPLV +MK+EK P  TY  IGGLD QI+EIKE +ELP+ HPE +E +GI  PKGV+LYGPPGTGKTLLA+AVA+ T  TF+R  GS L QKY+G+G ++ R+LF V +       F+DEID
Sbjct:   39 KTKGPDAASKPPLVTPHTQCRLKLLKL--ERIKDYLLMEEEFIRNQEQMKP-----LEEKQEEERSKVDDLRGT------PMS-VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEID 288          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.188e-36
Identity = 90/238 (37.82%), Postives = 135/238 (56.72%), Query Frame = 2
Query:  185 YLQHIHELQLQVRQKTHNLNRLEAQRNELN-----SRVRMLKEELQLLQEPGSYVGEVVKVM--GKN--KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868
            Y + I  L+  +++ T  +N L   +         S+  ++ ++    +EP   V    K++  GK   K ++ V    K+VV               RV +  + Y + + LP K+D  V +M+VE+ PD TY  +GG  +QI++++EV+E+P+ HPE F +LGI  PKGVL+YGPPGTGKTL ARAVA+ TD  F+R  GS L QKY+GEG+RM R LF + +   +   F DE+D
Sbjct:   36 YSKSIRILEEDIKKMTSKVNELCGIKESDTGIGPPSQWDLVVDKTSAHEEPPLQVARCTKIIDVGKPNAKYIITVKQIAKFVVALGDKLSPTDVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVD 273          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.469e-36
Identity = 85/223 (38.12%), Postives = 127/223 (56.95%), Query Frame = 2
Query:  203 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868
            E+QL VR     +  L+ +   L   +   K E++ +  P      V+ V+   +VLV+       VV            P   VAL      +  +LP K DP+V  M++ + P+ TY  IGGL++QI+E++EV+ELP+K+PE+F  +G+  PKGVLLYGPPGTGKT+LA+AVA  ++  FI    S   QK++GEG+R+ R+LF + +       F+DEID
Sbjct:   16 EVQL-VRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNIASHIDQKLIKPGISVALNQRGSTILEVLPQKEDPIVKTMEIIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEID 237          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.469e-36
Identity = 82/171 (47.95%), Postives = 106/171 (61.99%), Query Frame = 2
Query:  365 KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLFVWQGT---CSVYHFMDEID 868
            K ++ +    K+VV               RV +    Y + L LP ++DP V +M VE+ PD TY  +GG   QI++++EV+ELP+  PE F +LGI  PKG+LLYGPPGTGKTL ARAVA+ TD TFIR  GS L QKY+GEG+RM R+LF    T   C +  F DEID
Sbjct:  144 KYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACII--FFDEID 312          
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.218e-35
Identity = 91/235 (38.72%), Postives = 135/235 (57.45%), Query Frame = 2
Query:  173 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVH-PEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF--VWQGTCSVYHFMDEID 868
            LR   +Q IH+  L   +   N  RL+ Q    + R +  +  +  ++     VG + +++  +  +V    PE  Y V            P   V L + +  +  +L    DP++N+MK++K P  +Y  IGGL+ QI+EIKE +ELP+ HPEL+E +GI  PKGV+LYG PGTGKTLLA+AVA+ T  TF+R  GS L QKY+G+G R+ R+LF    + + S+  F+DEID
Sbjct:   67 LRLLKMQRIHDHLLMEEEYVQNQERLKPQ----DERTQEERNRVDEIRGTPMSVGTLEEIIDDDHAIVSTAGPE--YYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIV-FIDEID 294          
The following BLAST results are available for this feature:
BLAST of EY659744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 344
Match NameE-valueIdentityDescription
PSMR_SULIA1.880e-3638.57Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_AERPE1.880e-3639.91Proteasome-activating nucleotidase OS=Aeropyrum pe... [more]
PRS4_CAEEL1.880e-3637.97Probable 26S protease regulatory subunit 4 OS=Caen... [more]
PRS4B_ARATH1.880e-3637.8926S proteasome regulatory subunit 4 homolog B OS=A... [more]
PRS4A_ARATH1.880e-3637.8926S proteasome regulatory subunit 4 homolog A OS=A... [more]
PRS4_CHICK3.206e-3638.2626S protease regulatory subunit 4 OS=Gallus gallus... [more]
PRS7_DICDI4.188e-3637.8226S protease regulatory subunit 7 OS=Dictyostelium... [more]
PSMR_SULSO5.469e-3638.12Proteasome-activating nucleotidase OS=Sulfolobus s... [more]
PRS7_YEAST5.469e-3647.9526S protease regulatory subunit 7 homolog OS=Sacch... [more]
PRS4_SCHPO1.218e-3538.7226S protease regulatory subunit 4 homolog OS=Schiz... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659744 ID=EY659744; Name=EY659744; organism=Citrus sinensis; type=EST; length=940bp
TTTCGTCAACCCACGCGTCCGAGACTTGATTCGCAAGACAATTAGATTCG
AACAAATCGAACTCGTTCACTCGGAAAGAATGGCCGCTGTAGCAATCGAA
ACGAAGCAGCCGGAATCGGCGGCGCCAGAGGAGGTGTGTGCGGCGAAAGG
AGCATCGAAACAAGGAGAGGGATTGAGGCAATACTACCTCCAACACATTC
ACGAACTCCAGCTCCAAGTCCGTCAAAAAACCCACAATCTCAATCGCCTC
GAAGCCCAGCGTAACGAACTCAATTCTAGAGTGCGGATGCTTAAAGAAGA
ATTACAGCTTCTTCAAGAGCCTGGATCCTATGTCGGTGAAGTTGTTAAAG
TTATGGGAAAAAATAAGGTTCTTGTTAAGGTTCATCCTGAGGGGAAATAT
GTTGTTGATATTGATAAAAGTATTGATATAACCAAGATCACTCCGTCAAC
AAGAGTTGCACTTCGTAATGACAGCTATGTTCTTCATTTGATCCTGCCAA
GCAAAGTAGATCCCCTGGTCAACCTTATGAAGGTTGAAAAGGTCCCTGAT
TCTACATATGACATGATTGGTGGCCTTGATCAGCAAATTAAGGAGATCAA
GGAGGTCATTGAGCTTCCTATCAAACATCCCGAATTGTTCGAGTCTCTTG
GAATAGCTCAACCCAAGGGTGTATTGCTATATGGACCACCTGGTACTGGC
AAAACACTGTTGGCTAGAGCTGTGGCTCATCATACTGATTGTACTTTCAT
CAGGGGTTCTGGGTCTGGATTAGGCCAGAAATACATTGGAGAAGGCTCCA
GAATGTTTAGAAAACTTTTTGTATGGCAAGGGACATGCTCCGTCTATCAT
TTTATGGATGAAATTGACGGATTCGATCTGCCCGAATGAATTCTGCCACC
GAAATGGGGACAGGGAGGGCCAAAGACTTGCCGGACCTCC
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