EY659744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 1.489e-33 Identity = 82/234 (35.04%), Postives = 126/234 (53.85%), Query Frame = 2 Query: 191 QHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868 + + +L + ++ L LE Q + + LK EE++ +Q +G+ ++ + +N +V Y V P+ VAL S L +LP + D + ++ ++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIR GS QKY+GEG RM R +F + + F+DEID Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID 268
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.489e-33 Identity = 82/234 (35.04%), Postives = 126/234 (53.85%), Query Frame = 2 Query: 191 QHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868 + + +L + ++ L LE Q + + LK EE++ +Q +G+ ++ + +N +V Y V P+ VAL S L +LP + D + ++ ++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIR GS QKY+GEG RM R +F + + F+DEID Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID 268
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.945e-33 Identity = 82/234 (35.04%), Postives = 125/234 (53.42%), Query Frame = 2 Query: 191 QHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868 + + +L + ++ L LE Q + + LK EE++ +Q +G+ ++ + +N +V Y V P+ VAL S L +LP D + ++ ++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIR GS QKY+GEG RM R +F + + F+DEID Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVASTTGSNYYVRMVSTIDRELLKPNASVALHKHSNALVDVLPPAADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID 268
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.945e-33 Identity = 82/227 (36.12%), Postives = 128/227 (56.39%), Query Frame = 2 Query: 191 QHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868 +H+ +QLQ ++ ++ L + +EE++ +Q +G+ ++ + +N +V+ YVV PS+ VAL S L ILP + D + ++ + PD TY +GGLD Q +EI+E +ELP+ +L++ +GI P+GVLLYGPPGTGKT+L +AVA+ T +FIR +GS QKY+GEG RM R +F + + F+DEID Sbjct: 50 RHLEYIQLQEEY-------IKDEQRSLKRELVRAQEEIKRIQSVPLVIGQFMEAIDQNTGIVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEID 269
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 9.654e-33 Identity = 83/229 (36.24%), Postives = 124/229 (54.15%), Query Frame = 2 Query: 206 LQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868 L ++ +Q L LE + + + LK EEL ++ +G+ ++ + + +V +VV P+T VAL S + +LP +VD + +M + P TY +GGLD Q +EIKE +ELP+ +L+ +GI P+GVLLYGPPGTGKT+L +AVA+HT TFIR +GS QKY+GEG RM R +F + + F+DE+D Sbjct: 9 LFVRYKQMERKLRLLEIREGYVRKEIETLKREERHSREELDRVKSVPLIMGQFLEPIDSSTAIVGSTAGSNFVVRILSTVDRELLKPNTTVALHRHSSAIVGVLPPEVDSTIPVMGESEKPSVTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVD 237
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 1.261e-32 Identity = 84/235 (35.74%), Postives = 134/235 (57.02%), Query Frame = 2 Query: 176 RQYYLQHIHELQLQVRQKTHNLNRL---EAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868 +Q L+ + E + ++ +RL A+ N+ ++ L E + L++ ++ V ++ + V +K H + + P +RVA+ N V+ L + D +M+V+ PD Y+ IGGLD Q++E++E +ELP+K P LFE++GI P GVLL+GPPGTGKTL+A+AVA TD +FI+ +GS L K+IGEG+++ R LF V + F+DEID Sbjct: 20 QQDKLEALEEQLSTLEEENEERDRLLDANAENNKYQQKLERLSHENKKLKQSPLFIATVQELTDEGAV-IKQHGNNQEALTEVTDELRATLEPGSRVAVNNSLSVVRQ-LDDEADVRARVMEVDDSPDVGYEDIGGLDDQLREVRETVELPMKDPGLFETVGINPPSGVLLHGPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVVFIDEID 252
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.261e-32 Identity = 83/231 (35.93%), Postives = 129/231 (55.84%), Query Frame = 2 Query: 188 LQHIHELQLQVRQKTHNLNR--LEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF--VWQGTCSVYHFMDEID 868 L H+ ++ ++ +T NL + L AQ EE++ +Q +G+ ++ + +N +V Y V P VAL S L +LP + D + +++ ++ PD +Y IGGLD Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+LA+AVA +T +FIR GS QKY+GEG RM R +F + + S+ F+DEID Sbjct: 47 LAHLQVMEDYIKLETRNLEKELLHAQ------------EEVKRIQSVPLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSII-FIDEID 264
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.151e-32 Identity = 80/225 (35.56%), Postives = 125/225 (55.56%), Query Frame = 2 Query: 197 IHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868 + +L+ + T + ++ ++ L ++ +EE++ +Q +G+ ++ + +N +V YVV PS VAL S L ILP D +++M + PD TY +GGLD Q +EI+E +ELP+ +L+E +GI P+GVLLYGPPGTGKT+L +AVA+ T FIR +GS KY+GEG RM R +F + + F+DE+D Sbjct: 51 LKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQSVPLVIGQFLEPIDQNTGIVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVD 275
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.151e-32 Identity = 84/232 (36.21%), Postives = 126/232 (54.31%), Query Frame = 2 Query: 203 ELQLQVRQKT--HNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868 E+ L R K L L+ Q + + LK EE++ +Q +G+ ++ + +N +V YVV PS VAL+ S L ILP + D +++++ ++ PD +Y +GGLD Q +E++E +ELP+ +L+ +GI P+GVLLYGPPGTGKT+L +AVA+ T FIR GS QKY+GEG RM R +F + + F+DEID Sbjct: 6 EIDLYNRWKALERQLEMLDLQEGFIKEDCKSLKRELIRAQEEVKRIQSVPLVIGQFLEAIDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEID 237
BLAST of EY659744 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.668e-32 Identity = 69/127 (54.33%), Postives = 95/127 (74.80%), Query Frame = 2 Query: 491 ILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRGSGSGLGQKYIGEGSRMFRKLF-VWQGTCSVYHFMDEID 868 +L ++DP+VN+MK+EK P TY IGGL++QI+EIKE +ELP+ +PEL++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+R G+ L Q+Y+GEG ++ R+LF V F+DEID Sbjct: 146 VLEGEMDPMVNVMKLEKAPSETYADIGGLEEQIQEIKESVELPLTNPELYQEMGIKPPKGVILYGLPGTGKTLLAKAVANQTSATFLRVVGTELIQEYLGEGPKLVRELFRVADMHAPSIIFIDEID 272 The following BLAST results are available for this feature:
BLAST of EY659744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 344
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659744 ID=EY659744; Name=EY659744; organism=Citrus sinensis; type=EST; length=940bpback to top |