EY659743

Overview
NameEY659743
Unique NameEY659743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.353e-33
Identity = 76/182 (41.76%), Postives = 107/182 (58.79%), Query Frame = 3
Query:  168 PATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRD--ELDFEFLGNRTGQPYTVQTNIYANGKGDR--EQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIR--VYKNSGRAPFPMKPXMGVYSTLWEADDWGNRGG 695
            P  F E     + + +L +    R+++L+LD+ +G GF S   Y  G  S  IKL    +AG V AFY ++    V+D  ELD EFLGN  G+P+  QTN+Y NG  +R  E+R  LWFDP+ ++H Y+ILW    I+F+VDDVPIR  + K      +P KP M +Y+T+W+A  W   GG
Sbjct:   37 PIFFDEGLSHLFGEGNLIRSPDDRSVRLLLDKYTGSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYTSNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYPQKP-MSLYATIWDASSWATSGG 217          

HSP 2 Score: 21.557 bits (44), Expect = 5.353e-33
Identity = 6/20 (30.00%), Postives = 14/20 (70.00%), Query Frame = 2
Query:  704 IDGSKAPFYAYYRDFDIEGC 763
            +D + +PF + ++D  ++GC
Sbjct:  221 VDYTFSPFVSEFKDIALDGC 240          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH11_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 11 OS=Arabidopsis thaliana GN=XTH11 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.286e-28
Identity = 71/212 (33.49%), Postives = 107/212 (50.47%), Query Frame = 3
Query:  174 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMKPXMGVYSTLWEADDWGNRGGLEK*MXAKLLFMLITETLILRAAQVLDQQLCLEPRYWW 809
            T+  ++  TW    L  I     +QL LD+NSG GF S+  Y  G  +++IK     S G +T+FY+ S +    DEL F+ LG + G PY + TN+Y  G+G ++QR  LWFDP  DYH Y+ LWN + +VFYVDD PIRVY  +    +P    M +  ++         G +        +       +     + +    C +P++WW
Sbjct:   23 TWGNNYYQTWGHQAL-VINKTSELQLTLDKNSGSGFESQLIYGSGYFNVRIKAPQTTSTGVITSFYLISRSSR-HDELCFQILG-KNGPPYLLNTNMYLYGEGGKDQRFRLWFDPTKDYHSYSFLWNPNQLVFYVDDTPIRVYSKNPDVYYPSVQTMFLMGSV-------QNGSIIDPKQMPYIAKFQASKIEGCKTEFMGIDKCTDPKFWW 224          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: CRR1_YEAST (Probable glycosidase CRR1 OS=Saccharomyces cerevisiae GN=CRR1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.311e-12
Identity = 49/136 (36.03%), Postives = 70/136 (51.47%), Query Frame = 3
Query:  180 LEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGD--REQRVNLWFDPAADYHLYTILWNHHHIVFYVD 581
            LEDF  T S     +   G  +  +  + +G    S R +L+G+ S+++K     S G VTAF +   T  + DE+DFE+LG   G   T Q+N Y+ G  D  R QR  +  D  A YH Y I W+   I++YVD
Sbjct:  148 LEDFDFTHSGYTSIEASSGNIVLAMPKKTTGSLITSTRSFLYGKASVRMKTAR--SRGVVTAFDL---TSAIGDEIDFEWLG---GDLMTAQSNYYSQGHLDYTRMQRFPVGADTWATYHTYEIDWDPDRIIWYVD 275          
The following BLAST results are available for this feature:
BLAST of EY659743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH29_ARATH5.353e-3341.76Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH11_ARATH5.286e-2833.49Probable xyloglucan endotransglucosylase/hydrolase... [more]
CRR1_YEAST5.311e-1236.03Probable glycosidase CRR1 OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-F02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659743 ID=EY659743; Name=EY659743; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGTAACCACAACTTATCAATTAAAGTTCTCTTTCTAATTAG
TAACAGATAATATTTTATTGTACGGCTTGTTTTACAGCTATGGCTATCCT
AAGAAATGCAATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCT
CTTGCGTTTTAGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGTCACA
TGGTCCGATGCCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCT
AGTTCTAGACCAAAATTCAGGATGTGGGTTTGCTTCCAAAAGGCAGTACT
TGTTCGGGCGTGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTCTGCT
GGAACTGTCACTGCATTTTATATGAATTCCAACACCGAAAATGTGAGAGA
CGAGCTTGATTTTGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACACGG
TCCAGACCAATATCTATGCAAATGGAAAAGGCGATAGAGAACAGAGAGTG
AACCTCTGGTTTGACCCTGCTGCAGATTATCACCTTTACACTATTCTCTG
GAACCATCACCATATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTTT
ACAAAAACAGTGGAAGGGCTCCATTTCCAATGAAACCANCCATGGGGGTG
TATTCGACGCTGTGGGAAGCAGATGACTGGGGCAACAGAGGTGGTCTAGA
GAAATAGATGGNAGCAAAGCTCCTTTTTATGCTTATTACAGAGACTTTGA
TATTGAGGGCTGCCCAAGTTCTGGACCAGCAACTGTGCCTCGAACCCAGG
TACTGGTGGGGAGCAAATAATTATCAAGCCTCACCGCCATGAAGCAAAAG
AATCGATGGGTCGTCTCACCACATGACTTATGATATTGACTGATAATCAA
GACCCAGAACCCCCCCGTAT
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