EY659738

Overview
NameEY659738
Unique NameEY659738
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length492
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT_COLSC (Actin OS=Coleochaete scutata PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 4.562e-39
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            NIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 377
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT7_ARATH (Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 4.562e-39
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K+EYDESGPSIVHRKCF
Sbjct:  298 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT1_TOBAC (Actin OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 4.562e-39
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1 
Query:   16 IVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            IVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Sbjct:  299 IVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT_PINCO (Actin (Fragment) OS=Pinus contorta PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 7.781e-39
Identity = 78/80 (97.50%), Postives = 79/80 (98.75%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK EY+ESGPSIVHRKCF
Sbjct:   82 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKTEYEESGPSIVHRKCF 161
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT_CHLRE (Actin OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.016e-38
Identity = 77/80 (96.25%), Postives = 80/80 (100.00%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            NIVLSGG+TMFPGIADRMSKEITALAPS+MKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  298 NIVLSGGTTMFPGIADRMSKEITALAPSAMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 377
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSJ (Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.327e-38
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            NIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 377
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSI (Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 1.327e-38
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            NIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 377
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT1_PEA (Actin-1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.733e-38
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            NIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+KAEYDE GPSIVHRKCF
Sbjct:  297 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDERGPSIVHRKCF 376
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT13_SOLTU (Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.733e-38
Identity = 77/80 (96.25%), Postives = 78/80 (97.50%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            NIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI K EYDESGPSIVHRKCF
Sbjct:  298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKGEYDESGPSIVHRKCF 377
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT12_SOLTU (Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.733e-38
Identity = 77/80 (96.25%), Postives = 78/80 (97.50%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            NIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI K EYDESGPSIVHRKCF
Sbjct:  278 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKGEYDESGPSIVHRKCF 357
The following BLAST results are available for this feature:
BLAST of EY659738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 415
Match NameE-valueIdentityDescription
ACT_COLSC4.562e-3997.50Actin OS=Coleochaete scutata PE=2 SV=1[more]
ACT7_ARATH4.562e-3997.50Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1[more]
ACT1_TOBAC4.562e-39100.00Actin OS=Nicotiana tabacum PE=3 SV=1[more]
ACT_PINCO7.781e-3997.50Actin (Fragment) OS=Pinus contorta PE=3 SV=1[more]
ACT_CHLRE1.016e-3896.25Actin OS=Chlamydomonas reinhardtii PE=2 SV=1[more]
ACT3_ORYSJ1.327e-3896.25Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE... [more]
ACT3_ORYSI1.327e-3896.25Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2... [more]
ACT1_PEA1.733e-3896.25Actin-1 OS=Pisum sativum PE=2 SV=1[more]
ACT13_SOLTU1.733e-3896.25Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1[more]
ACT12_SOLTU1.733e-3896.25Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659738 ID=EY659738; Name=EY659738; organism=Citrus sinensis; type=EST; length=492bp
CCACGCGTCCGCAATATTGTCCTTAGTGGTGGCTCCACCATGTTCCCAGG
TATTGCTGATAGAATGAGCAAGGAGATCACTGCATTGGCTCCAAGTAGCA
TGAAGATCAAGGTGGTAGCACCACCAGAGAGGAAGTACAGTGTCTGGATA
GGAGGCTCGATATTGGCTTCCCTCAGCACCTTCCAGCAGATGTGGATCGC
AAAGGCAGAATATGATGAGTCTGGACCATCAATTGTCCACAGAAAATGCT
TCTAATCGTGGAAAGAGAAATGCAATGAGGAAACATATACCAGACATTTT
GTATTAAGGAAAGGCTTCTTCCAATCAAGCGGTTGTTCGAAGTTTCTTTT
TTCTCATCCTTTTCGTTCTTGTTTCTTTTTCGTGTTTTCGTCCTTTGATG
TCTGAACAATGAATATGGGGGGATTCAATTCTTTACATTATTATTTGTTA
GTAGAAGAGTATTGGATTGTTAAAAAAAAAAAAAAAAAAAAA
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