EY659738
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ARP2_CAEBR (Actin-related protein 2 OS=Caenorhabditis briggsae GN=arx-2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.383e-11 Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 1 Query: 10 RNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILASL--STFQQMWIAKAEYDESG 225 ++IVLSGG+TM+PG+ R+ KE+ L A KI++ APP RK+ V++GG++LA+L Q W++K EY+E G Sbjct: 297 KHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 381
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: CT134_MOUSE (Putative uncharacterized actin family protein C20orf134 homolog OS=Mus musculus PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.806e-11 Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = 1 Query: 16 IVLSGGSTMFPGIADRMSKEITALAPS----SMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIV 237 +VL+GGST+FPG +RM+ E+ A +++ +VA P R +VW GGS++ASL++FQ W+ +A Y E GP +V Sbjct: 264 VVLAGGSTLFPGFVERMNLELEAQCRRHGYPALQPCLVAHPGRDTAVWTGGSMMASLNSFQCRWMTRAMYQEHGPLLV 341
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: CT134_HUMAN (Putative uncharacterized actin family protein C20orf134 OS=Homo sapiens GN=C20orf134 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.806e-11 Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 16 IVLSGGSTMFPGIADRMSKEITALAP----SSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVH 240 +VL+GGST+FPG A+R+ KE+ A ++++ +VA R +VW GGS++ASL +FQ+ WI +A Y E G +++ Sbjct: 163 VVLAGGSTLFPGFAERLDKELEAQCRRHGYAALRPHLVAKHGRGMAVWTGGSMVASLHSFQRRWITRAMYQECGSRLLY 241
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ARP6_ARATH (Actin-related protein 6 OS=Arabidopsis thaliana GN=ARP6 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.806e-11 Identity = 31/81 (38.27%), Postives = 49/81 (60.49%), Query Frame = 1 Query: 10 RNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252 ++I+L+GGST+FP + +R+ E+ L P +K+ + VW GGS+LAS F+ M + KAEY+E G + R+ F Sbjct: 340 QSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ARP3_CAEBR (Actin-related protein 3 OS=Caenorhabditis briggsae GN=arx-1 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11 Identity = 36/90 (40.00%), Postives = 53/90 (58.89%), Query Frame = 1 Query: 13 NIVLSGGSTMFPGIADRMSKEITALA----------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSI 234 NIVLSGGSTMF A ++ +++ L+ P + ++V++ ++Y+VW GGS+LAS S F Q+ +KAEY E GPSI Sbjct: 326 NIVLSGGSTMFKDFARKLQRDVKRLSDARLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHSKAEYMEKGPSI 415 The following BLAST results are available for this feature:
BLAST of EY659738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 415
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659738 ID=EY659738; Name=EY659738; organism=Citrus sinensis; type=EST; length=492bpback to top |