EY659738

Overview
NameEY659738
Unique NameEY659738
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length492
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT1_HELTB (Actin CyI, cytoplasmic OS=Heliocidaris tuberculata PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.242e-36
Identity = 72/80 (90.00%), Postives = 76/80 (95.00%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGGSTMFPGIADRM KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  297 NTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT1_HELER (Actin CyI, cytoplasmic OS=Heliocidaris erythrogramma PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.242e-36
Identity = 72/80 (90.00%), Postives = 76/80 (95.00%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGGSTMFPGIADRM KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  297 NTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT_NEUCR (Actin OS=Neurospora crassa GN=act-1 PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 69/80 (86.25%), Postives = 78/80 (97.50%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            NIV+SGG+TM+PG++DRM KEITALAPSSMK+K++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NIVMSGGTTMYPGLSDRMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT_GAEGA (Actin OS=Gaeumannomyces graminis var. avenae GN=ACT PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 69/80 (86.25%), Postives = 78/80 (97.50%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            NIV+SGG+TM+PG++DRM KEITALAPSSMK+K++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NIVMSGGTTMYPGLSDRMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTY_LIMPO (Actin-11 OS=Limulus polyphemus PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 72/80 (90.00%), Postives = 76/80 (95.00%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGGSTMFPGIADRM KEI ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  297 NTVLSGGSTMFPGIADRMQKEICALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTM_APLCA (Actin, muscle OS=Aplysia californica PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TMFPGIADRM KEIT+LAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  297 NTVLSGGTTMFPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTG_XENTR (Actin, cytoplasmic 2 OS=Xenopus tropicalis GN=actg1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTG_XENLA (Actin, cytoplasmic 2 OS=Xenopus laevis GN=actg1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTG_TRIVU (Actin, cytoplasmic 2 OS=Trichosurus vulpecula GN=ACTG1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTG_TRISC (Actin, cytoplasmic 2 OS=Triakis scyllium GN=actg1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
The following BLAST results are available for this feature:
BLAST of EY659738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 415
Match NameE-valueIdentityDescription
ACT1_HELTB1.242e-3690.00Actin CyI, cytoplasmic OS=Heliocidaris tuberculata... [more]
ACT1_HELER1.242e-3690.00Actin CyI, cytoplasmic OS=Heliocidaris erythrogram... [more]
ACT_NEUCR1.622e-3686.25Actin OS=Neurospora crassa GN=act-1 PE=3 SV=2[more]
ACT_GAEGA1.622e-3686.25Actin OS=Gaeumannomyces graminis var. avenae GN=AC... [more]
ACTY_LIMPO1.622e-3690.00Actin-11 OS=Limulus polyphemus PE=2 SV=1[more]
ACTM_APLCA1.622e-3688.75Actin, muscle OS=Aplysia californica PE=2 SV=1[more]
ACTG_XENTR1.622e-3688.75Actin, cytoplasmic 2 OS=Xenopus tropicalis GN=actg... [more]
ACTG_XENLA1.622e-3688.75Actin, cytoplasmic 2 OS=Xenopus laevis GN=actg1 PE... [more]
ACTG_TRIVU1.622e-3688.75Actin, cytoplasmic 2 OS=Trichosurus vulpecula GN=A... [more]
ACTG_TRISC1.622e-3688.75Actin, cytoplasmic 2 OS=Triakis scyllium GN=actg1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659738 ID=EY659738; Name=EY659738; organism=Citrus sinensis; type=EST; length=492bp
CCACGCGTCCGCAATATTGTCCTTAGTGGTGGCTCCACCATGTTCCCAGG
TATTGCTGATAGAATGAGCAAGGAGATCACTGCATTGGCTCCAAGTAGCA
TGAAGATCAAGGTGGTAGCACCACCAGAGAGGAAGTACAGTGTCTGGATA
GGAGGCTCGATATTGGCTTCCCTCAGCACCTTCCAGCAGATGTGGATCGC
AAAGGCAGAATATGATGAGTCTGGACCATCAATTGTCCACAGAAAATGCT
TCTAATCGTGGAAAGAGAAATGCAATGAGGAAACATATACCAGACATTTT
GTATTAAGGAAAGGCTTCTTCCAATCAAGCGGTTGTTCGAAGTTTCTTTT
TTCTCATCCTTTTCGTTCTTGTTTCTTTTTCGTGTTTTCGTCCTTTGATG
TCTGAACAATGAATATGGGGGGATTCAATTCTTTACATTATTATTTGTTA
GTAGAAGAGTATTGGATTGTTAAAAAAAAAAAAAAAAAAAAA
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