EY659732

Overview
NameEY659732
Unique NameEY659732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PHOPR (Glycogen synthase OS=Photobacterium profundum GN=glgA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.940e-28
Identity = 84/251 (33.47%), Postives = 124/251 (49.40%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSG-EDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDA--KPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + DN  RF+ L  A+L+    L    +           V   NDWHT LIP  LKT Y     +  +K V  IHN  ++G F ++ + L  +P   +  +      N  +    I+ +KAG+  +D V  VSP+YA EL++     G+E D   R   + GI+NG D  +WNP TD YI  K+ A+ V  A  K   +  LQ +V LP + ++PV   + RL EQKG   L   +  F+    Q +++GTG
Sbjct:  118 YADNGERFTFLSAASLDLCEKLGFQPD-----------VIHCNDWHTGLIPFLLKTRYAESDFFAKSKSVITIHNAVFKGVFNYDQYSL--IPELIQRRY-----INAEMDPSHISMLKAGVAYADKVNAVSPNYASELLTHLGSHGMEADFQNRAKDLYGIINGCDYDDWNPETDVYIKQKFKANKVSLARGKKACRRDLQKQVNLP-EVDVPVYGMVCRLTEQKGLHYLIPVLEDFLLNDVQVVIVGTG 349          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_DESVH (Glycogen synthase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=glgA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.940e-28
Identity = 90/254 (35.43%), Postives = 127/254 (50.00%), Query Frame = 2
Query:   17 ESDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT--GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL-PVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + D+ DN  RF   C+A L   R L                V  A+DW T+L+P +L  + +    ++  + V  IHN+A+QGRFA   F    LP Q  S    +DG          N +KAGI  +D V TVSP YA+E++ G   G  LD I+RK    + GI+NG D   W+P  D+++  +Y   T +  K   K AL  E+GL P     P++ FIGRL  QKG D+L   +P  ++     I+LG G
Sbjct:  105 KGDYFDNCERFVFFCRALLALMRRLGQ-----------PPAVLHAHDWQTALVPAFLYFLRQTDPFWQDTRSVLTIHNLAFQGRFASRLFETSGLPPQAWS----VDGAE---FWGDFNLLKAGIAYADKVTTVSPSYAREIL-GPAYGSGLDGILRKRAHALHGILNGADYDIWSPGNDRFLPCRY-TPTDLAGKAQCKRALIEELGLDPHLARRPILGFIGRLRGQKGIDLLLDILPRLMESDVGVIILGEG 338          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_AERS4 (Glycogen synthase OS=Aeromonas salmonicida (strain A449) GN=glgA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.940e-28
Identity = 80/249 (32.13%), Postives = 127/249 (51.00%), Query Frame = 2
Query:   32 DNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVE-LDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            DN  RF+    AAL A   L+          +  ++V   NDWHT L+P  LKT +     ++  + V  IHN A+QG F  E F  +   A ++    +  G+        +N +K G+L +D +  VSP+YA EL++    G   + NI   R   ++GI+NG D ++W+P  D ++   YD    +  K + K+ LQ E GLPV  ++P+   + RL EQKG  +L   +  F+  K Q +++G+G
Sbjct:  113 DNGERFAFFSAAALHACEQLD----------FAPEIVH-CNDWHTGLLPLLLKTRHAHNPFFQHTRSVISIHNAAFQGVFGREQFWAMPEIADYEQRISYDYGH--------VNLLKCGVLYADKINAVSPNYASELLT--HLGAHGMANIFQQRAADLRGILNGCDYKDWDPAFDDFLPATYDVDN-LAGKRVCKQTLQQEAGLPV-TDLPIYGMVCRLTEQKGVHLLLPVLDKFLHHKVQVVIVGSG 338          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_VIBCM (Glycogen synthase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=glgA PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.064e-28
Identity = 79/253 (31.23%), Postives = 128/253 (50.59%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID-GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVQEWNPLTDKYIGVKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            + DN  RF     A L+    L +  +           +  ANDWHT L+P  LKT Y+    ++  K V  +HN  ++G F++    +  +P    S  +F+  G++       ++ ++AGI  +D V  VSP+YA EL++       +D+ +R+   + GIVNG D  EWNP TD Y+   Y  +  ++   K L K ALQ E+ LPV  ++P+   + RL  QKG   L   +  F++   Q +++GTG+
Sbjct:  106 YADNGERFGFFSAACLDVLPKLGIQPD-----------IIHANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHNAIFKGIFSYHQLEV--IPELNLSGMEFLQYGHD------HVSMLRAGIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLPATYSDEPESMRKGKALCKTALQEELHLPV-TDVPLFGMVCRLTHQKGFHYLLPILEQFLRNNVQVVIVGTGE 338          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_VIBCH (Glycogen synthase OS=Vibrio cholerae GN=glgA PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.064e-28
Identity = 79/253 (31.23%), Postives = 128/253 (50.59%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID-GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVQEWNPLTDKYIGVKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            + DN  RF     A L+    L +  +           +  ANDWHT L+P  LKT Y+    ++  K V  +HN  ++G F++    +  +P    S  +F+  G++       ++ ++AGI  +D V  VSP+YA EL++       +D+ +R+   + GIVNG D  EWNP TD Y+   Y  +  ++   K L K ALQ E+ LPV  ++P+   + RL  QKG   L   +  F++   Q +++GTG+
Sbjct:  106 YADNGERFGFFSAACLDVLPKLGIQPD-----------IIHANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHNAIFKGIFSYHQLEV--IPELNLSGMEFLQYGHD------HVSMLRAGIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLPATYSDEPESMRKGKALCKTALQEELHLPV-TDVPLFGMVCRLTHQKGFHYLLPILEQFLRNNVQVVIVGTGE 338          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_VIBC3 (Glycogen synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=glgA PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.064e-28
Identity = 79/253 (31.23%), Postives = 128/253 (50.59%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID-GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVQEWNPLTDKYIGVKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            + DN  RF     A L+    L +  +           +  ANDWHT L+P  LKT Y+    ++  K V  +HN  ++G F++    +  +P    S  +F+  G++       ++ ++AGI  +D V  VSP+YA EL++       +D+ +R+   + GIVNG D  EWNP TD Y+   Y  +  ++   K L K ALQ E+ LPV  ++P+   + RL  QKG   L   +  F++   Q +++GTG+
Sbjct:  106 YADNGERFGFFSAACLDVLPKLGIQPD-----------IIHANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHNAIFKGIFSYHQLEV--IPELNLSGMEFLQYGHD------HVSMLRAGIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLPATYSDEPESMRKGKALCKTALQEELHLPV-TDVPLFGMVCRLTHQKGFHYLLPILEQFLRNNVQVVIVGTGE 338          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_GEOTN (Glycogen synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=glgA PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.064e-28
Identity = 83/254 (32.68%), Postives = 133/254 (52.36%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFA---FEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            H D+  RF+  C+A LE  P I            +  DV+   +DWHT ++P  L+  Y+ +  Y   + VF IHN+ +QG F     ED  LLNL  ++  + D ++ Y        +++MK  ++ SD++ TVSP Y +E+ +    G  LD ++R  +  + GI+NG+D + +NP  D ++   Y   T  + K L K ALQ + GLP   ++P+I  + R+  QKG D++       + E  Q +VLGTG
Sbjct:  101 HYDDGERFAYFCRAVLEVLPEI-----------QFQPDVIH-CHDWHTGMVPFLLREQYRHELFYVDMRTVFTIHNLQFQGLFPRGILED--LLNLDGRY-FTVDHLEFYGC------VSFMKGALVASDLITTVSPTYKEEIQTAY-YGERLDGLLRARRDDLLGILNGIDDEFYNPEADPFLTATYSVHT-RERKQLNKRALQRQFGLPEWDDVPLIAMVTRMTAQKGLDLVTCVFHEMMSEDMQLVVLGTG 331          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_DESVV (Glycogen synthase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=glgA PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.064e-28
Identity = 90/254 (35.43%), Postives = 127/254 (50.00%), Query Frame = 2
Query:   17 ESDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT--GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL-PVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + D+ DN  RF   C+A L   R L                V  A+DW T+L+P +L  + +    ++  + V  IHN+A+QGRFA   F    LP Q  S    +DG          N +KAGI  +D V TVSP YA+E++ G   G  LD I+RK    + GI+NG D   W+P  D+++  +Y   T +  K   K AL  E+GL P     P++ FIGRL  QKG D+L   +P  ++     I+LG G
Sbjct:  105 KGDYFDNCERFVFFCRALLALMRRLGQ-----------PPAVLHAHDWQTALVPAFLYFLRQGDPFWQDTRSVLTIHNLAFQGRFASRLFETSGLPPQAWS----VDGAE---FWGDFNLLKAGIAYADKVTTVSPSYAREIL-GPAYGSGLDGILRKRAHALHGILNGADYDIWSPGNDRFLPCRY-TPTDLAGKAQCKRALIEELGLDPHLARRPILGFIGRLRGQKGIDLLLDILPRLMESDVGVIILGEG 338          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_BACST (Glycogen synthase OS=Bacillus stearothermophilus GN=glgA PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.064e-28
Identity = 83/254 (32.68%), Postives = 133/254 (52.36%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFA---FEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            H D+  RF+  C+A LE  P I            +  DV+   +DWHT ++P  L+  Y+ +  Y   + VF IHN+ +QG F     ED  LLNL  ++  + D ++ Y        +++MK  ++ SD++ TVSP Y +E+ +    G  LD ++R  +  + GI+NG+D + +NP  D ++   Y   T  + K L K ALQ + GLP   ++P+I  + R+  QKG D++       + E  Q +VLGTG
Sbjct:  101 HYDDGERFAYFCRAVLEVLPEI-----------QFQPDVIH-CHDWHTGMVPFLLREQYRHELFYVDMRTVFTIHNLQFQGLFPRGILED--LLNLDGRY-FTVDHLEFYGC------VSFMKGALVASDLITTVSPTYKEEIQTAY-YGERLDGLLRARRDDLLGILNGIDDEFYNPEADPFLTATYSVHT-RERKQLNKRALQRQFGLPEWDDVPLIAMVTRMTAQKGLDLVTCVFHEMMSEDMQLVVLGTG 331          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_STRPI (Glycogen synthase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=glgA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.184e-27
Identity = 77/220 (35.00%), Postives = 122/220 (55.45%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD-FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDSW 802
            +D+HT++IP  LK  Y+    Y+  + V  IHN+ +QG+F+    G L     F   F+ + DG  +      +NWMKAGIL ++ V TVSP YA E+++ +  G  LD I++     + GIVNG+D   +NP TD  +   ++    +  K   K  LQ  VGLPV  ++P++  + RL  QKG D++  ++   ++E  Q ++LGTG   +  +F SW
Sbjct:  132 HDYHTAMIPFLLKEKYRWIQAYEDIETVLTIHNLEFQGQFSEGMLGDL-----FGVGFERYADGTLR--WNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQF-GCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQED-LSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQKGFDVVVESLHHILQEDVQIVLLGTGDPAFEGAF-SW 341          
The following BLAST results are available for this feature:
BLAST of EY659732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
GLGA_PHOPR6.940e-2833.47Glycogen synthase OS=Photobacterium profundum GN=g... [more]
GLGA_DESVH6.940e-2835.43Glycogen synthase OS=Desulfovibrio vulgaris (strai... [more]
GLGA_AERS46.940e-2832.13Glycogen synthase OS=Aeromonas salmonicida (strain... [more]
GLGA_VIBCM9.064e-2831.23Glycogen synthase OS=Vibrio cholerae serotype O1 (... [more]
GLGA_VIBCH9.064e-2831.23Glycogen synthase OS=Vibrio cholerae GN=glgA PE=3 ... [more]
GLGA_VIBC39.064e-2831.23Glycogen synthase OS=Vibrio cholerae serotype O1 (... [more]
GLGA_GEOTN9.064e-2832.68Glycogen synthase OS=Geobacillus thermodenitrifica... [more]
GLGA_DESVV9.064e-2835.43Glycogen synthase OS=Desulfovibrio vulgaris subsp.... [more]
GLGA_BACST9.064e-2832.68Glycogen synthase OS=Bacillus stearothermophilus G... [more]
GLGA_STRPI1.184e-2735.00Glycogen synthase OS=Streptococcus pneumoniae (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659732 ID=EY659732; Name=EY659732; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGACTGGAGAGTGACCACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGG
TGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTA
AGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGAC
AAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCC
TCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAA
ATATTCCTGTCATANGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCA
GATATTCTTGCAGCTGCCATTCCCCCATTCATCAAAGAGAAATGTCAGAA
TATAGTCCTTGGTACTGGCAAAAAACCATGGNAGAGCAGCTTTGACAGTT
GGAGATACTGTACCCTGAGAAAGCCAGAGAGTAGCGAAAATCAATATTCC
TCTGGCGCATATGATTATAGCAGAGCTGATTTTATTTTGATCCNAGCAGA
ATTGAACTTGTGGCCTCATCAAT
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