EY659732

Overview
NameEY659732
Unique NameEY659732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_RHOFD (Glycogen synthase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=glgA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.184e-27
Identity = 89/251 (35.46%), Postives = 126/251 (50.20%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            D  DN +RF+ L  A     + L+         P+    V   +DWH+ L P Y++     K    +   VF IHN+AYQG FA  +   L LP   KS FD IDG+       K+++MKA +  +D + TVSP YA+E +S E +G  LD ++R+    + GI+NG+D   WNP TD  +   YD    +  K L K ALQ + GL    N  V   + RL EQKG  +L   +   ++   Q  +LG G
Sbjct:  113 DWSDNAIRFAALGWAGATLGQGLD---------PHWRPDVIHCHDWHSGLTPTYVRAFAAAK--QATPATVFTIHNLAYQGLFAAAEVTRLGLP---KSWFD-IDGFEF---FGKVSFMKAALRYADRITTVSPTYARE-ISSEAQGCGLDGLLRERANSLSGILNGVDDLIWNPATDALLPAPYDEHK-LQGKTLAKRALQTKFGLEPRANALVFGAVSRLTEQKGLHLLPQVLADMVQRGGQLALLGQG 343          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_TREDE (Glycogen synthase OS=Treponema denticola GN=glgA PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.546e-27
Identity = 93/268 (34.70%), Postives = 134/268 (50.00%), Query Frame = 2
Query:    2 HASGLESDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFA---FEDFGLLNLPAQFKSSFDFIDGYNKPVRG-RKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKG-----SDILAAAIPPFIKEKCQNIVLGTGK 772
            + S  E D  DN  RFSLL  AA +  R             +  DVV  A+DW   L+P  L+   K    +K+   VF IHN+ YQG ++   F D GL           D+ D Y        +IN++KA ++ SDM+ TVSP YA+E+   E  G  +D I+R  +  + GI+NG+D   WNP  D+YI  +Y++ T ++ K   K  LQ   GL +D ++PV   I RL +QKG       +  +A       K Q +VLG+G+
Sbjct:   99 YGSAFEPDFSDNTKRFSLLAHAAFQVCR----------KQAWIPDVVH-AHDWAAGLVPVLLRFTEK-NTEFKNTASVFTIHNMGYQGVYSKHTFPDTGL-----------DWNDFYTTGFEDWDRINFLKAALVSSDMLTTVSPSYAEEIKRPEF-GFRMDGILRYREKELTGILNGVDTSIWNPSKDEYIPYRYNSKT-LEEKEKNKSVLQERFGLEIDISVPVFGMISRLVDQKGISELFGPMYGSAFKICSDIKLQMVVLGSGE 341          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_CALS8 (Glycogen synthase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=glgA PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.019e-27
Identity = 90/261 (34.48%), Postives = 134/261 (51.34%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQF--KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            + D+  RFS   +A  EA  I +L+        +  D++ V NDWHTS+IP  LK  Y     ++  K V  IHN+ YQG F  E  + LL+LP ++  ++   F D          I+++K GI+ +D V+TVS  YA E+ +    G  L  ++   G K  GIVNG+D +  NP TDK I V YDA+T    K   K  LQ  + LPV  +I +I  + RL ++KG D++   +   +    Q ++LG G   +   F
Sbjct:  101 YYDDGERFSYFSRAVCEA--IYHLD--------FDVDIIHV-NDWHTSVIPVLLKAHYSHSPKHQKIKTVLTIHNLRYQGVFPKEVMYDLLSLPDEYFDENKLKFYDA---------ISFLKGGIIFADKVVTVSKTYANEIRT-LSHGEGLHGLLSGIGEKLVGIVNGIDYEVCNPATDKLIFVNYDANTFESRKKENKFRLQQMLNLPVSDDIVLIGMVSRLTKEKGIDLIERILSRLLTLPVQLVILGAGDYHYEQMF 340          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_FINM2 (Glycogen synthase OS=Finegoldia magna (strain ATCC 29328) GN=glgA PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.637e-27
Identity = 87/255 (34.12%), Postives = 126/255 (49.41%), Query Frame = 2
Query:  149 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF--KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFI-KEKCQNIVLGTGKKPWXSSFD--SWRYCTLRKPESSENQYSSGAYDYSRADFILI 892
            +NDWHT+++  Y +   K    Y+S K VF IHN+ YQG F+       +L   +  + +  F D          IN+MK  I+ SD V TVS  YA E +     G  LD +IR+    I GI NG+D   WNP TDKY+   Y    + D K   K+ALQ   GL  ++N+PV   + RL E KG +++   +  F+  E  Q ++LGTG   +   F    W++    K     N   S    Y+ ADF+++
Sbjct:  131 SNDWHTAMVNVYARDFAKGDPFYESIKTVFTIHNLKYQGVFSSNSLRQTDLSPMYFTEDALKFYDA---------INFMKGAIVFSDRVTTVSKTYADE-IKYSFFGEGLDGVIRQYHYKISGITNGIDTTIWNPETDKYLFKNYSLKNIKD-KDENKKALQRMYGLE-EKNVPVFAMVTRLVENKGLELVRYIMDEFLTTEDVQVVILGTGDYSYEEMFKYYEWKFPDKLKANIYYNNEESHKI-YAGADFLMM 372          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_DESRM (Glycogen synthase OS=Desulfotomaculum reducens (strain MI-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.637e-27
Identity = 81/260 (31.15%), Postives = 137/260 (52.69%), Query Frame = 2
Query:   29 QDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDS 799
            +D+  RF+   +A LE    ++   N           +   +DWHT +I  +LK+ Y+    Y+  + VF IHN+ YQG F       +L L  ++    D ++ Y       ++++MK G+  SD++ TVS  YA+E +     G +LD ++R  K  + GI+NG+D+  +NP TD +I V +   TV D K + KE+LQ  + LP+  ++PV   + RL  QKG +++ + +   +    Q +VLG+G+K +   F S
Sbjct:  102 EDDAERFAFFDRAILEVLPRIDFQPN-----------IIHCHDWHTGMISTFLKSHYRNNPFYQDIRTVFTIHNLQYQGVFPRTILQNVLGLGNEY-FGLDGLEFYG------QVSFMKGGVNYSDILTTVSETYAEE-IQLPQYGEQLDGLLRHQKRKLHGILNGIDIDIYNPDTDPHICVNFSRETV-DKKHINKESLQKILCLPMRPDVPVFGMVSRLVSQKGLELIGSVLDDILALDVQLVVLGSGEKHYEDMFRS 341          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_ANATD (Glycogen synthase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=glgA PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.637e-27
Identity = 88/251 (35.06%), Postives = 130/251 (51.79%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + D+  RFS   +A  EA   L+          +  D++ V NDWHTS+IP  LK  Y     +   K +  IHN+ YQG F  E  + LL+LP ++ S  D +  Y+       I+++K GI+ SD V+TVS  YA E V     G  L  ++   G K  GI+NG+D + +NP TDK I V YD++T  + K   K  LQ  + LPV   I +I  + RL ++KG +++   I   +    Q ++LG G
Sbjct:  101 YYDDGERFSFFSRAVCEAVYHLD----------FDVDIIHV-NDWHTSVIPVLLKAHYGHSDKHNKIKTILTIHNLKYQGIFPKEVMYDLLSLPDEYFSE-DKLKFYDA------ISFLKGGIIYSDKVVTVSRTYANE-VRTLSYGEGLHGLLSGIGEKLIGIINGIDYEVYNPATDKLIFVNYDSNTFENRKKENKFRLQQMLNLPVSDEIVLIGMVSRLTKEKGIELIERIINKLLTLPVQLVILGAG 332          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_ACTSZ (Glycogen synthase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=glgA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.673e-27
Identity = 90/264 (34.09%), Postives = 129/264 (48.86%), Query Frame = 2
Query:   20 SDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDSW 802
            +D+ DN  RF LL   A E    L+          + +  V  A+DWH  L   YL     P      AK VF IHN+AYQG+FA      L LP       D  +     + G +I+++KAG+  SDMV TVSP YA+E+ + E   G++  L  + ++  + G++NG+D   W+P  D YI   Y   + M  K   K  LQ    LP + N+PV   I RL EQKG D+L       + +  Q ++LG+G  P    + +W
Sbjct:  101 NDYADNYKRFGLLGWVASELALGLDF---------WWQAEVVHAHDWHAGLASAYLAAKGHP------AKSVFTIHNLAYQGKFAARHLIELGLPV------DMFNVNGLELYG-EISYLKAGLFYSDMVTTVSPTYAKEITTTEFGYGLQGLLSTLDQQNRLAGVLNGVDDSIWHPNNDPYIHHHYKLKS-MSGKAKNKALLQERFNLPQNPNVPVFVMITRLTEQKGVDLLLQCADEIVNQGGQLMILGSG-APHLQDWVNW 340          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_LACPL (Glycogen synthase OS=Lactobacillus plantarum GN=glgA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.002e-26
Identity = 81/214 (37.85%), Postives = 115/214 (53.74%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF---AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL--KEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEK-CQNIVLGTG 769
            NDWHT+ IP  L   Y     Y+  K V  IHN+ +QG +     +    +      ++   F D         ++NW+K GI  +D V TVSP YAQE +     G  LD ++R    K  GI+NG+D+Q ++P TD  +   Y A    D KP    K ALQ  +GLPV +N+PV+  + RL +QKG D+L  A+ PF++++  Q IVLGTG
Sbjct:  134 NDWHTAFIPVLLAEKYYWIEAYRDIKTVLTIHNLQFQGVYDPIILDSLFRIGTETYTEAGVAFYD---------QVNWLKGGINFADAVNTVSPTYAQE-IQTPAFGERLDGVLRANRYKLSGILNGIDMQLYDPATDLALTANYSAK---DLKPKRQNKRALQRRLGLPV-KNMPVLAVVSRLTKQKGIDLLLDALNPFLQQQDVQLIVLGTG 333          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_LACAC (Glycogen synthase OS=Lactobacillus acidophilus GN=glgA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.002e-26
Identity = 80/213 (37.56%), Postives = 115/213 (53.99%), Query Frame = 2
Query:  140 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR-GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            V   ND+HT+ IP  L   +     YK  K +  IHN+ +QG++  +      LP  F  ++D+ D  +  VR    +NWMK GIL +D V TVSP YA+E+ + E  G  LD I+R    K  GI+NG+D +++NP TD  I   YD    +  K   K ALQ E+ LP+  NIP+I  + RL  QKG  +L   +   ++   Q ++LG G
Sbjct:  128 VLHCNDYHTAFIPFLLHEKWGFVDAYKGIKTILTIHNLEFQGKYNAK-----TLPDFFGMNYDWFD--SGIVRMDNDVNWMKTGILYADRVTTVSPSYAREIQTVEF-GQGLDAILRMCSHKLTGILNGIDFEKYNPKTDPVIKKNYDVYH-LHHKSKDKIALQKELDLPIKPNIPLIGMVSRLTAQKGCQLLLDELDNILQFNVQIVILGNG 331          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_VIBFM (Glycogen synthase OS=Vibrio fischeri (strain MJ11) GN=glgA PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.309e-26
Identity = 81/252 (32.14%), Postives = 128/252 (50.79%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSG-EDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS--TVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + DN  RF+    A L+  P++LN             D++ V NDWHT LIP  LK  Y     Y   + V  IHN  ++G F +++   L   ++FKS F         +    ++ +KAG+  +D +  VSP+YA+EL++     G+  D   R++ + GI+NG D  EWNP  D YI  ++  +  +++  K   K ALQ EV LP  +++ +   + RL  QKG   L   +  F+K   Q +++GTG
Sbjct:  108 YADNGERFAFFSAATLDLLPKLLNKKP----------DIIHV-NDWHTGLIPYLLKKRYAENEFYHQTRSVLSIHNAVFKGIFHYDEIACL---SEFKSHF----VPEASISHTHVSMLKAGVQCADKINAVSPNYAKELLTELGSHGMASDFQDRESDLIGILNGCDYSEWNPEKDSYIPKQFKVNRISMVRGKKACKAALQQEVSLP-QKDVAMYGMVCRLTNQKGIQYLLPILEQFLKNDLQLVIVGTG 340          
The following BLAST results are available for this feature:
BLAST of EY659732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
GLGA_RHOFD1.184e-2735.46Glycogen synthase OS=Rhodoferax ferrireducens (str... [more]
GLGA_TREDE1.546e-2734.70Glycogen synthase OS=Treponema denticola GN=glgA P... [more]
GLGA_CALS82.019e-2734.48Glycogen synthase OS=Caldicellulosiruptor saccharo... [more]
GLGA_FINM22.637e-2734.12Glycogen synthase OS=Finegoldia magna (strain ATCC... [more]
GLGA_DESRM2.637e-2731.15Glycogen synthase OS=Desulfotomaculum reducens (st... [more]
GLGA_ANATD2.637e-2735.06Glycogen synthase OS=Anaerocellum thermophilum (st... [more]
GLGA_ACTSZ7.673e-2734.09Glycogen synthase OS=Actinobacillus succinogenes (... [more]
GLGA_LACPL1.002e-2637.85Glycogen synthase OS=Lactobacillus plantarum GN=gl... [more]
GLGA_LACAC1.002e-2637.56Glycogen synthase OS=Lactobacillus acidophilus GN=... [more]
GLGA_VIBFM1.309e-2632.14Glycogen synthase OS=Vibrio fischeri (strain MJ11)... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659732 ID=EY659732; Name=EY659732; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGACTGGAGAGTGACCACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGG
TGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTA
AGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGAC
AAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCC
TCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAA
ATATTCCTGTCATANGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCA
GATATTCTTGCAGCTGCCATTCCCCCATTCATCAAAGAGAAATGTCAGAA
TATAGTCCTTGGTACTGGCAAAAAACCATGGNAGAGCAGCTTTGACAGTT
GGAGATACTGTACCCTGAGAAAGCCAGAGAGTAGCGAAAATCAATATTCC
TCTGGCGCATATGATTATAGCAGAGCTGATTTTATTTTGATCCNAGCAGA
ATTGAACTTGTGGCCTCATCAAT
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