EY659732

Overview
NameEY659732
Unique NameEY659732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_EXISA (Glycogen synthase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=glgA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.108e-25
Identity = 83/258 (32.17%), Postives = 127/258 (49.22%), Query Frame = 2
Query:   11 GLESDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDV--VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            G+   H D+  RF+   +A LE    +             EDV  V   +DW T ++P +L+  Y+    Y+  + V+ IHN+ YQG F  E  G L    QF       +G         +N+MKAGI+ SD + TVSP Y  E++     G  LD  +R     ++GI+NG+D+   +P TD+ I   Y+  T  + K + K ALQ  +GL V  ++ +I F+ RL +QKG D++        +  CQ   LG+G+
Sbjct:   97 GVLYGHFDDAERFAFFSRAVLEMIGKM-------------EDVPDVLHCHDWQTGILPAFLRIHYQHIEAYQRIRTVYTIHNLQYQGIFPEEILGEL---LQFGPEHFTAEGIQ---HNGLVNYMKAGIVHSDQITTVSPSYRDEIMEPY-YGEGLDGALRYRAVDVRGILNGIDLATNDPNTDQRIAETYNLDTYKEGKVVNKRALQERLGLEVRDDVMLIGFVSRLVDQKGLDLINGVREELGQLPCQFAFLGSGQ 334          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_ERWCT (Glycogen synthase OS=Erwinia carotovora subsp. atroseptica GN=glgA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.108e-25
Identity = 85/252 (33.73%), Postives = 122/252 (48.41%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR----KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + DN LRF+LL     E    L+          Y    +  A+DWH  L   YL    +P      AK VF +HN+AYQG FA      L+LP+      DF   Y     G+ I+++KAG+  +D + TVSP YA E+      G  ++ +++    +  + GI+NG+D   WNP  D  +   Y    + + K   K  LQ  +GL VD   PV   + RL  QKG DI  +AIP  +++  Q +VLG G
Sbjct:  103 YADNYLRFALLGWMGCEMACGLD---------HYWRPDIVHAHDWHAGLTCAYLAARNRP------AKSVFTVHNLAYQGLFAAGHMANLHLPS------DFFQVYGLEFYGQ-ISYLKAGLFYADHITTVSPTYAHEITLPA-YGYGMEGLLKTREEEGRLSGILNGVDETIWNPTHDPLLTNHYSREALAN-KAENKRHLQTAMGLKVDDKAPVFAIVSRLTSQKGLDIALSAIPDLLEQGGQLVVLGAG 330          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_ENT38 (Glycogen synthase OS=Enterobacter sp. (strain 638) GN=glgA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.108e-25
Identity = 79/252 (31.35%), Postives = 127/252 (50.40%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG----IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + DN LRF+LL     E    L+         P+    +  A+DWH  L P YL     P      AK VF +HN+AYQG +       ++LP      + F + +     G+ I+++KAG+  +D +  VSP YA+E+   E  G  ++ ++R+      + GI+NG+D + WNP TD  +  ++   +V D K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q  +LG G
Sbjct:  103 YTDNVLRFALLGWVGAEMATGLD---------PFWRPDIVHAHDWHAGLAPAYLAARGHP------AKSVFTVHNLAYQGMYYAHHMNEIDLP------WSFYNMHGLEFNGQ-ISFLKAGLYYADHITAVSPTYAREITEPEF-GYGMEGLLRQRQREGRLTGILNGVDEKIWNPETDLLLASRFSRDSVED-KAENKRQLQVAMGLKVNDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAG 330          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA2_BRAJA (Glycogen synthase 2 OS=Bradyrhizobium japonicum GN=glgA2 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.447e-25
Identity = 88/257 (34.24%), Postives = 129/257 (50.19%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK----INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKK 775
            D  DN +RF+ L + A +    L           +  D+V  A+DW   L P YL    +P+        V  IHN+AYQG+FA E  G + LP    SSFD        V G +    I+++KAG+  +D + TVSP YA+E+ S E  G+ L  ++R     + GI+NG+D+  WNP TD +I  ++ A   +  +   K  LQ +  L      P++  I RL  QKG D+L  AIP  + E  Q  +LG+G +
Sbjct:  106 DWPDNGVRFAALSRVAADIGHGL--------VPAFVPDIVH-AHDWQAGLAPAYLHYDNRPR-----PGTVMTIHNMAYQGKFAPELIGAIGLPW---SSFD--------VNGLEYFGGISFLKAGLQFADRITTVSPTYAREIQSDEG-GMGLGGLLRARAGALSGILNGIDIAVWNPQTDSHIAYRFGAED-LTFRAANKAVLQQQFNLDSSDEAPLLGVISRLSWQKGLDLLLEAIPTILGEGMQLALLGSGDR 335          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_BURTA (Glycogen synthase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=glgA PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.890e-25
Identity = 89/265 (33.58%), Postives = 131/265 (49.43%), Query Frame = 2
Query:   17 ESDHQDNQLRFSLLCQ-AALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKE--KCQNIVLGTGKKPWXSSFDS 799
            ++D  DN  RF LLCQ AA  A     L         +  DVV  A+DWH  L+    +     +      K VF IHN A+QG FA +D   + LPA    S D ++ Y       +++++KAG   +D + TVSP YA E+ + E   G+E     R+  + GI+NG+D + WNP TD+++   Y     M  K   K ALQ E+GL  D   P++  + RL  QK SDI+   +P  + +  + Q  + G G +     FD+
Sbjct:  101 DADWADNAYRFGLLCQVAARVALGAAGLR--------WRPDVVH-AHDWHGGLVALLTRGAGDAR-----PKTVFTIHNAAFQGNFALDDAARIGLPAD-ALSVDGVEFYG------QLSFLKAGARYADRLTTVSPTYAGEIQTAEFGCGLEGLYAARRDQLSGIMNGIDTELWNPATDRWLPQPYSIDD-MGGKAGCKAALQQELGLCADARAPLVASVCRLTSQKMSDIVLERLPEQLAQHPRMQFALHGRGDRALEQGFDA 343          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_YERE8 (Glycogen synthase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=glgA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.224e-25
Identity = 82/252 (32.54%), Postives = 125/252 (49.60%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG----IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + DN  RF+LL   A E    L+          Y    V  A+DWH  L   YL    +P      A+ VF +HN+AYQG F+      + LPA F   +  ++ Y +      I+++KAG+  +D V TVSP YA+E+      G  ++ ++++      + GI+NG+D   W+P TD  +  +YDA   +  K + K  LQ  +GL V    P+   + RL EQKG D++  A+P  ++   Q  VLG G
Sbjct:  103 YADNYRRFALLGWMACELACGLD---------GYWRPEVVHAHDWHAGLACAYLAARGRP------ARSVFTVHNLAYQGLFSGHHLAEIQLPAAFFQMYG-LEFYGQ------ISYLKAGLFFADHVTTVSPTYAKEITQPAF-GYGMEGLLQERASQGRLTGILNGVDSDIWDPQTDTLLHARYDAED-LQKKAVNKTHLQTTMGLEVTEKKPIFAVVSRLTEQKGLDLVLEALPDLLQLGGQLAVLGAG 330          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPB (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=glgA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.224e-25
Identity = 86/261 (32.95%), Postives = 129/261 (49.43%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDS 799
            D  DN  RF+ L + A E  + L  +        +  D++  A+DW   L P YL+   KP+        VF +HN+A+QG+F  E    L LP     S D ++ Y        I +MK+G+  SD + TVSP YA E + G   G+ LD ++R+    + GI+NG+D + WNP TDK I   YD    + A+    ++++    L +D +  ++  I RL  QKG D+L  A+P  + E  Q  +LG G       F S
Sbjct:  106 DWPDNAYRFAALARTAAEIGQGLVPS--------FVPDIIH-AHDWQAGLTPAYLRYSGKPQ-----PATVFTVHNLAFQGQFPRELLATLGLPPG-AFSVDGVEYYGS------IGYMKSGLQLSDRITTVSPAYALE-IQGPQAGMGLDGLLRQRAAQLTGILNGIDDKVWNPATDKRITATYDLDH-LAARRANTQSVRELFDLSLDPDRLLLGVISRLSWQKGLDLLLEALPVLLAEGIQLALLGAGDPELEERFKS 343          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_RHOCS (Glycogen synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=glgA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.224e-25
Identity = 87/254 (34.25%), Postives = 127/254 (50.00%), Query Frame = 2
Query:   20 SDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKK 775
            +D  DN LRF+ L  AA      + L  +    G      +  A+DW T L+P YL+   +  G  +   V F IHN+A+QG         L+LP     SF     +     G KI  +KAG+  +D + TVSP YAQE + G   G  LD ++R     + GI+NG+D+  WNP +D  I  +YDA T+++A+   K  L+   GL    + P+   + RL  QKG D++  A+P  +    Q  +LGTG K
Sbjct:  117 TDWPDNALRFASLSAAAAR----IGLEGD----GEGWRPEIIHAHDWQTGLVPAYLRFAAERTGAKRPVSV-FTIHNLAFQGLVPPALLADLDLPPH---SFSI---HGLEFHG-KIGLLKAGLYYADKLTTVSPTYAQE-IQGPAMGFGLDGLLRARARDLSGILNGVDLGLWNPASDPLIPARYDA-TLLEARQAAKAELRHAFGLGSVPDGPLFAVVSRLTHQKGIDLVLEALPRLLALGGQLAILGTGDK 352          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_DESDG (Glycogen synthase OS=Desulfovibrio desulfuricans (strain G20) GN=glgA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.224e-25
Identity = 86/255 (33.73%), Postives = 124/255 (48.63%), Query Frame = 2
Query:   17 ESDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFV-ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT--GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD-RNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + D+ DN  RF   C+AA    R L            GE    V A+DW T+L+P  L    +    ++  + V  IHN+A+QGRF+   F    LP Q   S D ++ Y         N +K GI  +D V TVSP YA+E+ + E  G  L+ I+R+    + GI+NG D   W P  D+++   Y     +  K   K AL  E+GL       PV+ FIGRL +QKG D+L   I   ++ +   ++LG G
Sbjct:  105 KGDYFDNCERFVFFCRAAASMCRRL------------GEAPAVVHAHDWQTALLPALLYHWRRYDSFWEDTRTVMTIHNLAFQGRFSSRLFENCGLPPQ-AWSMDGVEFYG------DFNLLKGGIAYADKVTTVSPSYAREITTPE-FGCGLEGILRRRTHALHGILNGADYDIWKPEDDRFLPCTYSPDR-LAGKQRCKRALLDELGLDSSLMERPVLGFIGRLRDQKGIDLLIDNIAQLMERQVGVVILGEG 338          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_VIBSL (Glycogen synthase OS=Vibrio splendidus (strain LGP32) GN=glgA PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.499e-25
Identity = 79/255 (30.98%), Postives = 127/255 (49.80%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKP---VRGRKINWMKAGILESDMVLTVSPHYAQELVSG-EDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS--TVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + DN  RFS    A L+  P++            +  D++  ANDWHT  +P  LK+ Y+    +++ + V  IHN  ++G FA+++   L+           +  YN P   V    +  +KAG++ +D +  VSP YA+EL +     G+  +   R   + GI+NG D   WNP TD ++  K+ A+  ++   K   K+ LQ +VGLPV  +  V   + RL  QKG   L   I  F+K + Q +++GTG
Sbjct:  108 YADNGERFSFFSTACLDMLPKLA-----------FQPDIIH-ANDWHTGFVPFLLKSRYQQHDFFENTRSVISIHNAVFKGVFAYDELQCLS----------EMHSYNVPEASVSDTHVTMLKAGVMCADKINAVSPTYAEELKTELGSHGMAAEFQHRSADLFGILNGCDYGAWNPETDAFLPRKFKATKHSMTRGKSACKQKLQQDVGLPV-TDCAVYGMVCRLTNQKGVHYLLPIIEQFLKNELQIVIVGTG 339          
The following BLAST results are available for this feature:
BLAST of EY659732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
GLGA_EXISA1.108e-2532.17Glycogen synthase OS=Exiguobacterium sp. (strain A... [more]
GLGA_ERWCT1.108e-2533.73Glycogen synthase OS=Erwinia carotovora subsp. atr... [more]
GLGA_ENT381.108e-2531.35Glycogen synthase OS=Enterobacter sp. (strain 638)... [more]
GLGA2_BRAJA1.447e-2534.24Glycogen synthase 2 OS=Bradyrhizobium japonicum GN... [more]
GLGA_BURTA1.890e-2533.58Glycogen synthase OS=Burkholderia thailandensis (s... [more]
GLGA_YERE83.224e-2532.54Glycogen synthase OS=Yersinia enterocolitica serot... [more]
GLGA_RHOPB3.224e-2532.95Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_RHOCS3.224e-2534.25Glycogen synthase OS=Rhodospirillum centenum (stra... [more]
GLGA_DESDG3.224e-2533.73Glycogen synthase OS=Desulfovibrio desulfuricans (... [more]
GLGA_VIBSL5.499e-2530.98Glycogen synthase OS=Vibrio splendidus (strain LGP... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659732 ID=EY659732; Name=EY659732; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGACTGGAGAGTGACCACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGG
TGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTA
AGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGAC
AAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCC
TCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAA
ATATTCCTGTCATANGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCA
GATATTCTTGCAGCTGCCATTCCCCCATTCATCAAAGAGAAATGTCAGAA
TATAGTCCTTGGTACTGGCAAAAAACCATGGNAGAGCAGCTTTGACAGTT
GGAGATACTGTACCCTGAGAAAGCCAGAGAGTAGCGAAAATCAATATTCC
TCTGGCGCATATGATTATAGCAGAGCTGATTTTATTTTGATCCNAGCAGA
ATTGAACTTGTGGCCTCATCAAT
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