EY659732

Overview
NameEY659732
Unique NameEY659732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_ROSDO (Glycogen synthase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=glgA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.941e-23
Identity = 81/261 (31.03%), Postives = 123/261 (47.13%), Query Frame = 2
Query:   20 SDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYG-EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            +D  DN LRF  L   A +             +G  G +  +  A+DW   L+P YL  M  PK        V  IHNIA+QG F+ +    L L A   +  D ++ Y        + ++KAG+  +D + TVSP YA+E++  E  G+ L+ ++R     + GI+NG+D   WNP TD  +   Y     + AK   ++A+    GL    N P+   I RL  QKG D+L   +P  +       VLG+G +   ++F
Sbjct:  102 TDWPDNPLRFGALSWVAADIAA----------NGAAGWQPEIVHAHDWQAGLVPAYLHQMDAPK-----PPCVLTIHNIAFQGLFSPDLMAPLGLDAALYTQ-DGMEFYGN------LGFLKAGLAFADKITTVSPTYAREIMQPEF-GMGLEGLLRARARDVSGILNGIDTDVWNPETDPALPKSYSLKG-LKAKQQSRQAVLERFGLTPPDNAPLFCVISRLTTQKGVDVLLDVVPDLVARGAGLAVLGSGDRDLEAAF 338          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_ENTS8 (Glycogen synthase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=glgA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.147e-23
Identity = 75/253 (29.64%), Postives = 124/253 (49.01%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP-AQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG----IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + DN +RF+LL     E    L+         P+    +  A+DWH  L P YL    +P      AK VF +HN+AY+G F       + LP + F  +    +G        +I+++KAG+  +D +  VSP YA+E+   +     L+ ++++      + GI+NG+D   WNP  D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q  +LG G
Sbjct:  103 YADNVIRFALLGWVGSEMAAGLD---------PFWRPDIVHAHDWHAGLTPAYLAARGRP------AKSVFTVHNLAYKGMFYAHHMDEIGLPWSMFNMNGLEFNG--------EISFLKAGLYYADHITAVSPTYAREITEPQF-AYGLEGLLKQRHSEGRLSGILNGVDENIWNPAHDLLLASRYTRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAG 330          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_RHILO (Glycogen synthase OS=Rhizobium loti GN=glgA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.722e-23
Identity = 86/258 (33.33%), Postives = 135/258 (52.33%), Query Frame = 2
Query:    2 HASGLESDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            +ASG  +D  DN  RF+ L QA  +        +    SG Y  ++V  A+DW +++   Y++      G       +  +HN+A+QG+F    FG L LPA    + D ++ Y        + ++KAG+  +  + TVSP YAQE+ S E  G+ LD +I  R + + GIVNG+D   W+P TDK++   Y A+T + A+   + A++   GL  D + P++  I RL  QKG DILA  I   +    +  +LG+G
Sbjct:   98 NASG--ADWPDNWRRFAALSQAGADI-------AGGAISG-YLPEIVH-AHDWQSAMTLAYMRY-----GKAVGTPSMMTVHNLAFQGQFGAGIFGELGLPA-VAMALDGVEYYGG------VGFLKAGLQAAWAITTVSPTYAQEIRSPEF-GMGLDGLINMRSSDLYGIVNGIDTAIWDPETDKHLVSNYTATT-LKARAPNRAAVEERFGLDRD-DSPIVCVISRLTWQKGMDILATVIDGIVATGARLAILGSG 329          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PROVI (Glycogen synthase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=glgA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.722e-23
Identity = 66/216 (30.56%), Postives = 106/216 (49.07%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            +DW+ SL+P  LKT+Y+    ++  K    IHN+  QG   F+    L LP +  S             G  +N +  G+  +DM+ T SP YA+E+         L  ++  R   + GIVNG+D ++WNP TDK I  +Y A   M+ K   K AL  E+ L  D + PV+  I   +E +G+ ++A ++        Q ++ G+G + +   F
Sbjct:  148 HDWYASLVPLLLKTVYRDHEFFRGIKTAMTIHNVYRQGVLPFKVLKKL-LPDEVCSELH--------RSGDDVNMLYTGVEHADMLTTTSPSYAEEITGEAGNAFGLSEVLGERNMTLHGIVNGIDTRQWNPSTDKLIKKRY-APERMEGKTENKRALLEEIKLSPDTDRPVVGVIINFDEFQGAGLIAGSLKKLAAMDIQLVICGSGDQKYEKQF 353          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_GRABC (Glycogen synthase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=glgA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.722e-23
Identity = 81/255 (31.76%), Postives = 132/255 (51.76%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALE-APRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLK-TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKK 775
            D  DN  RF+  C+AA + A  IL           +  D+V  A+DW   L+P YL  +   P+       V+F IHN+A+QG    +    L LP     S D ++ Y +      I  +KAG+  +D + TVSP YA+E+ + +  G+ L  ++R     + G++NG+D+ EWNP  D ++   +D  + ++ + + +EAL+   GL      P+   + RL  QKG D++  A+P  I ++ Q +VLG+G K
Sbjct:  103 DWADNAERFAAFCRAAADIALGILP---------DWTPDIVH-AHDWQAGLVPAYLALSEASPR-----PPVLFTIHNLAFQGVVPRDRLAALLLPPD-SFSVDGVEYYGQ------IGLLKAGLHYADALTTVSPSYAREIQT-DTGGMGLGGLLRDRAAVLNGLLNGIDMTEWNPAHDPHVKAHFDRHS-LEHRTINREALRTRFGLDSSAG-PLFGIVSRLTGQKGIDLVLNALPFLISQQAQLVVLGSGDK 332          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_MARMS (Glycogen synthase OS=Marinomonas sp. (strain MWYL1) GN=glgA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.779e-23
Identity = 80/259 (30.89%), Postives = 129/259 (49.81%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            D +DN +RF+ L  A        +L +       +  D++ + NDW T     YL++        +   VV  +HN+ Y G F    F  ++L      S + ++ +     GR  + +KAG++ ++ V TVSP YA+E+++ E  G  LD  +R  +  + GI+NG+D  +W+P  D  I   YD  T +  K   K AL  E GL  D N PV   + RL EQKG D++   +P  +++  + +VLG+G K   S +
Sbjct:  106 DFEDNHIRFAALSWATATLALHGHLMN-------WQADILHL-NDWQTGFAAAYLESW-----KVEHIPVVTTVHNLRYNGSFDMNQFSAMHL------SPELLNMHGMEFYGR-FSGLKAGLVYANAVTTVSPTYAKEILTPE-YGDGLDGALRAMQDRLVGILNGVDYNQWSPEKDTLIPHNYDIDT-LSQKQANKLALLQENGLSEDLNQPVFGVVSRLTEQKGLDLVLQVMPALLEKGARLVVLGSGDKYLESQY 342          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_VARPS (Glycogen synthase OS=Variovorax paradoxus (strain S110) GN=glgA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.147e-22
Identity = 83/258 (32.17%), Postives = 128/258 (49.61%), Query Frame = 2
Query:   32 DNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDA--STVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            DN  RF+LL  AA +  + L+         P  +  V  A+DWH  L P YL    +  G+ ++  V F +HN+AYQG  A  +F  L LPA    +F      N      ++++MK G+  +D + TVSP YA+E+ + E +G  LD ++R  G  + GI+N +D + WNP TD  +   Y       M  K   K  LQ ++GL    + P+   + RL EQKG  ++   +   + E  Q  +LG+G+     +F
Sbjct:  113 DNHRRFALLGWAAAQLAQGLD---------PAWQPEVVHAHDWHAGLAPAYLH-FAREAGLTRTGSV-FTVHNLAYQGISAPWNFADLGLPAP---AFHM----NGLEYHGQVSFMKGGLYFADRLTTVSPTYAREIQTPE-QGFGLDGLLRLRGGVLTGILNAVDDEVWNPATDSALVQGYHTPDGRHMAGKARCKAVLQHQLGLAERPDAPLFILVSRLTEQKGLHLVLGGLDTLLAEGGQLALLGSGEAGLEQAF 351          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_THIDA (Glycogen synthase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glgA PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.147e-22
Identity = 83/258 (32.17%), Postives = 126/258 (48.84%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKS--SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR---NIPVIXFIGRLEEQKGSDILAAAIPPFIKE-KCQNIVLGTGK 772
            D  DN  RF++         R+  L +       +  DVV   +DW T L+P +L  +          + VF IHN+AY G F   DF  L LPA + S    +F  G++          +KAGI+ +D V TVSP YA+E+ +    G  LD ++R    K  GI+NG+D   W+P  D ++  +Y A  ++  K   K+AL        D      P++  +GRL EQKG D + AA+P  + E   + ++LG+G+
Sbjct:  108 DWPDNAERFAVFA-------RVAALLAQDAHEAGWLPDVVHT-HDWQTGLVPAFLADLPA------RPRTVFTIHNLAYGGHFPHGDFLRLQLPAHWWSHEGVEFHGGFSM---------LKAGIVYADAVTTVSPTYAEEICTPAF-GYGLDGLLRSRRHKLHGILNGIDSATWDPADDPHLRARYTAGRILPGKRRDKQALLERFLPAADEAALQAPLVGLVGRLVEQKGIDWVLAAMPLLLAETDARFVLLGSGQ 341          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_RHORT (Glycogen synthase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=glgA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.147e-22
Identity = 83/252 (32.94%), Postives = 122/252 (48.41%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQEL---VSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            D  DN  RF+LL + A       +L         +  DV+   +DW T L+P YL      +  +     +F IHN+ Y+G F  E   L+ LP   +S F  I+G      G  ++ +KAGI+ +  V TVSP YA E+   V G+  G+E     R   + GI+NG+D   WNP TD Y+    D +     K + K+ L+  +GL  D + P+   + R   QKG D++ AA+P  I    Q  +LG G
Sbjct:  106 DWPDNFRRFALLSKVAAMIGTAGDLMD-------WRPDVLH-GHDWQTGLVPAYLNAWGARRPPF-----LFSIHNMEYRGLFGPEILDLIGLP---RSQFS-INGLE--FHGL-VSTLKAGIVYAQAVATVSPSYAAEIKTPVGGQ--GLEGLLQARAGDLSGILNGIDSNAWNPQTDPYLAAPIDGADPAPGKRINKDMLKRRMGLDADGDRPLFGLVSRFVAQKGIDLVVAALPGMIAGGAQVAILGAG 335          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_ACHLI (Glycogen synthase OS=Acholeplasma laidlawii (strain PG-8A) GN=glgA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.147e-22
Identity = 86/282 (30.50%), Postives = 138/282 (48.94%), Query Frame = 2
Query:   11 GLESDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM-YKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQE-WNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKKPWXSSFDSWRYCTLRKPESSEN 841
            GL   H D + RF+    A LE+  I+           +  D++ + NDW TS+IP  L   Y+ +   Y     +  IHN+ YQG F  +      +   F + FD+       +   ++N++KAGI  +  + TVSP Y++E+++ E  G  LD  +  R     GI+NG+D Q  +NP TDKY+   Y  S     K L K+ L    GL  + + P+I ++GRL +QKG  ++   +   I+    + I++G+G K +    D +RY T + P    N
Sbjct:   96 GLYGYHDDAE-RFAAFSYAILESLDIIE----------FYPDILHI-NDWQTSMIPYLLDKHYRHQSFNYFRIHTLLTIHNLQYQGDFDKD------VAKFFNTDFDYTY-----IHFDRVNYLKAGIERATKINTVSPTYSKEVMTRE-YGFSLDGSLQNRINDFSGILNGIDDQNTFNPKTDKYLIKTYSVSNHKSGKNLNKQFLLEHFGLDKNLDEPLIAYVGRLADQKGLGLMEYCLEEVIQYSNAKFILMGSGDKAYE---DYFRYLTYKYPNKVGN 350          
The following BLAST results are available for this feature:
BLAST of EY659732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
GLGA_ROSDO3.941e-2331.03Glycogen synthase OS=Roseobacter denitrificans (st... [more]
GLGA_ENTS85.147e-2329.64Glycogen synthase OS=Enterobacter sakazakii (strai... [more]
GLGA_RHILO6.722e-2333.33Glycogen synthase OS=Rhizobium loti GN=glgA PE=3 S... [more]
GLGA_PROVI6.722e-2330.56Glycogen synthase OS=Prosthecochloris vibrioformis... [more]
GLGA_GRABC6.722e-2331.76Glycogen synthase OS=Granulibacter bethesdensis (s... [more]
GLGA_MARMS8.779e-2330.89Glycogen synthase OS=Marinomonas sp. (strain MWYL1... [more]
GLGA_VARPS1.147e-2232.17Glycogen synthase OS=Variovorax paradoxus (strain ... [more]
GLGA_THIDA1.147e-2232.17Glycogen synthase OS=Thiobacillus denitrificans (s... [more]
GLGA_RHORT1.147e-2232.94Glycogen synthase OS=Rhodospirillum rubrum (strain... [more]
GLGA_ACHLI1.147e-2230.50Glycogen synthase OS=Acholeplasma laidlawii (strai... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659732 ID=EY659732; Name=EY659732; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGACTGGAGAGTGACCACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGG
TGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTA
AGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGAC
AAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCC
TCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAA
ATATTCCTGTCATANGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCA
GATATTCTTGCAGCTGCCATTCCCCCATTCATCAAAGAGAAATGTCAGAA
TATAGTCCTTGGTACTGGCAAAAAACCATGGNAGAGCAGCTTTGACAGTT
GGAGATACTGTACCCTGAGAAAGCCAGAGAGTAGCGAAAATCAATATTCC
TCTGGCGCATATGATTATAGCAGAGCTGATTTTATTTTGATCCNAGCAGA
ATTGAACTTGTGGCCTCATCAAT
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