EY659732

Overview
NameEY659732
Unique NameEY659732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_HAEI8 (Glycogen synthase OS=Haemophilus influenzae (strain 86-028NP) GN=glgA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.691e-22
Identity = 80/253 (31.62%), Postives = 122/253 (48.22%), Query Frame = 2
Query:   20 SDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            +D+ DN  RF+LL     E    L+          +    V  A+DWH  L   YL    +P      AK VF IHN+AYQG+F++     + LP    +    ++G        +I+++K+G+  SD    VSP YA+E+ + E   G++  L  +  +  + GI+NG+D   W+P  D+YI   Y     M  K   K  LQA   LP D +      + RL EQKG D+L  +    +K+  Q ++LG+G
Sbjct:  101 NDYGDNYKRFALLGWVGAELATGLD---------SWWRAEVVHAHDWHAGLCAAYLFNKGRP------AKSVFTIHNLAYQGQFSYHHLYEIGLP----TGMFHVEGLEL---FGQISYLKSGLFYSDASTAVSPTYAEEITTPEFAYGLQGLLSGLKAQGRLVGILNGVDENIWHPNVDQYIPHHYKLK-YMAGKKKNKAELQAYFNLPQDESALAFVMVTRLTEQKGVDLLIESADEIVKQGGQLMILGSG 330          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA2_METCA (Glycogen synthase 2 OS=Methylococcus capsulatus GN=glgA2 PE=3 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.691e-22
Identity = 76/247 (30.77%), Postives = 125/247 (50.61%), Query Frame = 2
Query:   32 DNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPA-QFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVS-GEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGT 766
            D+  RF+   +AA+E            +      D++   +DW T+L+P YL  +Y+P GM +  +V F IHN  +QG    +      L   ++   +D +   + P     IN MK GI+ ++ V TVSP YA E    G+  G+E    I      G+VNG+D   WNP  D +I V ++  T+ + K   K+AL+  + L  D   P++ F+GRL+ QKG +++  A+   + +  Q ++LG+
Sbjct:  104 DDIFRFAFFSRAAMEF----------LWKAGKNPDIIH-CHDWQTALVPVYLYEIYQPMGM-RHPRVCFTIHNFKHQGVTGAQVLHASGLDRPEYYFHYDRLRDNHNP---HAINLMKGGIVYANFVTTVSPRYAMEAKDQGQGFGLEPTLHIHHMKYGGVVNGIDYDVWNPEIDPHIPVHFNVDTI-EGKYADKKALRDRL-LLADNEKPIVSFVGRLDPQKGIELIRHALFYTLGQGGQFVLLGS 333          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PELLD (Glycogen synthase OS=Pelodictyon luteolum (strain DSM 273) GN=glgA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.707e-22
Identity = 68/216 (31.48%), Postives = 108/216 (50.00%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR-KTGI-KGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            +DW+ SLIP  LKT+Y+    +K  K V  IHN   QG   F+ F  L LP +   +               +N +  G+  +DM+ T S  +A E++  E  G  L  I+  + GI  GIVNG+D ++WNP TDK I  ++ A+  MD K   + AL  EV +P +   PV+  I   ++ +G+ ++  ++   +      ++ G G K +  SF
Sbjct:  148 HDWYASLIPLLLKTVYRDHEFFKGIKTVLTIHNAYRQGVLPFKVFEKL-LPEEVSGALH--------RSAENVNMLYTGVENADMLTTTSKLHADEILHDEIPGCGLQQILAGQNGILHGIVNGIDTRQWNPSTDKLIKKRF-ATDRMDGKLDNRAALSEEVHMPFEDGRPVVGVIMHFDDFQGAVLIEKSLKKLVALDIHLLICGAGDKKYEKSF 353          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_CHLL2 (Glycogen synthase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=glgA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.707e-22
Identity = 66/219 (30.14%), Postives = 108/219 (49.32%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDSW 802
            +DW+  L+P  LKT+Y     +   K V  +HN+  QG   F+ F  L LP +  S+      Y     G  +N +  G   +D++ T S  YA E+V        L  ++  RK+   GI+NG+D ++WNP TDK I  +Y A+  ++ K   K+AL  E GLP     P+   I   +  +G+++L  ++   ++   Q I+ G+G K +   F  +
Sbjct:  148 HDWYAGLLPLLLKTVYASNSFFSDVKTVLTVHNVYRQGILPFKVFQKL-LPEEVSSAL-----YR---AGDNVNMLYTGAEHADLLTTTSRLYADEIVGNGSDTYGLGTVVEERKSTFHGILNGIDTRQWNPSTDKLIKKRY-AADRLEGKLDNKKALLDEAGLPFTEGRPLAGIIIGFDAFQGAELLKESLVKLVELDMQLIICGSGDKEYEKYFQDF 356          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA1_SYNJA (Glycogen synthase 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.707e-22
Identity = 83/253 (32.81%), Postives = 133/253 (52.57%), Query Frame = 2
Query:   32 DNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF---GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKP 778
            D+ +RF+   +AALE      L SNK        D++   +DW T L+P  L  +YK  GM ++ +V + IHN  +QG    E     GL   P  F   +D +     P     +N+MK GI+ S+ V TVSP +A E   G  + G+     + +   +G++NG+D   WNP  D++I   Y A T ++ K   K+AL+ ++ L  D + P++ +IGRL+EQKG  ++  AI   + +  Q ++LG+  +P
Sbjct:  107 DDNMRFAFFSKAALE----FLLKSNKR------PDIIH-CHDWQTGLVPVLLFEIYKYHGM-ENQRVCYTIHNFKHQGFGGPEILWATGLNREPYYFH--YDRLRDNFNPFA---LNFMKGGIVFSNFVTTVSPTHALEARFGNYNYGLGHTLYLHQHKFRGVLNGIDYDIWNPEIDRFIPFHYTAQT-LENKAKNKKALRDQLWLQ-DVDKPIVAYIGRLDEQKGVHLVHHAIYRSLFKNAQFVLLGSATEP 340          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA1_RHIME (Glycogen synthase 1 OS=Rhizobium meliloti GN=glgA1 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.268e-21
Identity = 81/251 (32.27%), Postives = 124/251 (49.40%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            D+ DN  RF+ L  AA E        +       +  D+V V +DW T+L P Y++      G       V  IHNIA+QG+F    F  L LP    S+  F++ Y        + ++K G+  +  + TVSP YAQE+++ E  G+ LD ++  R   + GIVNG+D + W+P TD +I   Y   T +  +   ++AL+   GL      P+   I RL  QKG D++A A    +    + +VLG+G
Sbjct:  103 DYPDNFRRFAALSLAAAEI-------AGNGIIPNWKPDIVHV-HDWQTALTPVYMRF-----GPAPDLPTVMTIHNIAFQGQFGASVFPELALPPDAFST-QFVEYYGD------VGFLKGGLQTASAITTVSPSYAQEILTPEF-GMGLDGLLSSRVADLTGIVNGIDGETWDPQTDPHIPAHYGPGT-LKRRAGNRKALEERFGLEKGPG-PIFCVISRLTWQKGMDLVAEAADDIVALGGKLVVLGSG 330          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_ACIAC (Glycogen synthase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.162e-21
Identity = 81/257 (31.52%), Postives = 124/257 (48.25%), Query Frame = 2
Query:   17 ESDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYG--EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSA--KVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + DH DN LRF LL   A    RI    S      P G   D+V  ANDW T+L P YL+      G    A  + +  +HN+A+QG F  +    L +  +         G        +++ +KAG+  +D + TVSP YA+E+ + E  G  LD ++R     ++GI+NG+D   WNP  D  I   + A   ++ K   K AL+  +GL  D +  +   +GR+ EQKG D +       +++  Q  +LG+G
Sbjct:  102 QGDHPDNALRFGLLAHVAA---RIGTPQS------PCGWTADIVH-ANDWPTALAPLYLRQFRDAAGPRGDAVARSMVTVHNLAFQGVFPMDWAQRLGIEDRHL-------GIEGAEFWGQLSMLKAGLQYADAITTVSPTYAREIQTPE-LGFGLDGVLRARAGRLQGILNGIDTALWNPSQDTLIPAPFSADR-LEGKAACKAALRRTLGLAQDGDRMLFGLVGRMTEQKGIDWVIGGAERLLRQGGQLAILGSG 339          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_SYNE7 (Glycogen synthase OS=Synechococcus elongatus (strain PCC 7942) GN=glgA PE=3 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.824e-21
Identity = 83/267 (31.09%), Postives = 127/267 (47.57%), Query Frame = 2
Query:   29 QDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKV--VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKKPWXSSFDSWRYCT 814
            +D   RF+     A E            FS  Y +  V   +DWHT +IP +         M++S  +  VF IHN+AYQG + ++   +   P   +                  + M A +L +D V TVSP YAQ++ +    G +L+ ++      + GI+NG+DV  +NP TD  I   YD  T +D +   K ALQ E+GL V+ +  +I F+ RL EQKG D+L   +  F+     Q +VLGTG++ + +    W   T
Sbjct:   99 EDEDWRFTFFANGAAE------------FSWNYWKPQVIHCHDWHTGMIPVW---------MHQSPDISTVFTIHNLAYQGPWRWKLEKITWCPWYMQGD----------------STMAAALLYADRVNTVSPTYAQQIQT-PTYGEKLEGLLSFISGKLSGILNGIDVDSYNPATDTRIVANYDRDT-LDKRLNNKLALQKEMGLEVNPDRFLIGFVARLVEQKGIDLLLQILDRFLSYSDAQFVVLGTGERYYETQL--WELAT 324          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA2_SYNY3 (Probable glycogen synthase 2 OS=Synechocystis sp. (strain PCC 6803) GN=glgA2 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.824e-21
Identity = 86/297 (28.96%), Postives = 138/297 (46.46%), Query Frame = 2
Query:   32 DNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF-IDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQEL-VSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDSWRYCTLRKPESSENQYSSGAYDYSRADFILIXAELNLWP 916
            D+ +RF+   +AA+E      L SNK        D++   +DW T L+P  L  +Y+  GM    +V + IHN  +QG        +L+       S+ F  D          IN+MK GI+ S+ V TVSPH+A E   S    G+     I +    GI+NG+D + WNP  D  +   +   T  D K   K+AL+  + L  D   P++ FIGRL+ QKG  ++  +I   + +  Q ++LG+  +P   +   W +   +    + N +    +D   A  I   A++ + P
Sbjct:  107 DDHMRFAFFSKAAME----FLLRSNKR------PDIIH-CHDWQTGLVPVLLYEIYRFHGM-DHQRVCYTIHNFKHQG---IAGANILHATGLNNDSYYFSYDRLQDNFNPNAINFMKGGIVYSNYVNTVSPHHAWEARFSDISCGLGHTLEIHQQKFGGILNGLDYEVWNPEIDPLLASNFSVKTFGD-KAKNKQALRERLLLETDDKKPMLCFIGRLDGQKGVHLVHHSIYYALSQGAQFVLLGSATEP---NLSKWFWHEKQHLNDNPNVHLELGFDEELAHLIYGAADIIVVP 384          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_DESHD (Glycogen synthase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=glgA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.689e-21
Identity = 79/251 (31.47%), Postives = 119/251 (47.41%), Query Frame = 2
Query:   32 DNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFE-DFGLLNLPAQFKSS--FDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            D   +++   +A LE+ R L          P  +  +   +DWHT+L+P +LK  Y    +Y + K +F IHN+ YQG F  E    +L L  +  SS   +F  G         +N+MKAGI+ SD V TVSP YA+E +     G  L  +I  RK  + GI+NG+  + W              S  +  K   +  LQ ++    +  IP++  I RL EQKG D+L   +   +    + +VLGTG
Sbjct:  103 DEGEQYAYFSRAVLESVRYL----------PEFKPDIIHCHDWHTALVPLFLKAFYAQDTLYYNIKTLFTIHNLKYQGIFPREVREDVLGLSGELSSSAQLEFYGG---------VNFMKAGIMHSDQVTTVSPTYARE-IQHPYFGEGLHGVIQGRKDSLLGILNGVP-RPW-------------PSPTLADKRANRMKLQEQLNFTNNEEIPILSMISRLVEQKGLDLLLHVLDEILALDIRLVVLGTG 319          
The following BLAST results are available for this feature:
BLAST of EY659732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
GLGA_HAEI85.691e-2231.62Glycogen synthase OS=Haemophilus influenzae (strai... [more]
GLGA2_METCA5.691e-2230.77Glycogen synthase 2 OS=Methylococcus capsulatus GN... [more]
GLGA_PELLD9.707e-2231.48Glycogen synthase OS=Pelodictyon luteolum (strain ... [more]
GLGA_CHLL29.707e-2230.14Glycogen synthase OS=Chlorobium limicola (strain D... [more]
GLGA1_SYNJA9.707e-2232.81Glycogen synthase 1 OS=Synechococcus sp. (strain J... [more]
GLGA1_RHIME1.268e-2132.27Glycogen synthase 1 OS=Rhizobium meliloti GN=glgA1... [more]
GLGA_ACIAC2.162e-2131.52Glycogen synthase OS=Acidovorax avenae subsp. citr... [more]
GLGA_SYNE72.824e-2131.09Glycogen synthase OS=Synechococcus elongatus (stra... [more]
GLGA2_SYNY32.824e-2128.96Probable glycogen synthase 2 OS=Synechocystis sp. ... [more]
GLGA_DESHD3.689e-2131.47Glycogen synthase OS=Desulfitobacterium hafniense ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659732 ID=EY659732; Name=EY659732; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGACTGGAGAGTGACCACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGG
TGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTA
AGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGAC
AAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCC
TCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAA
ATATTCCTGTCATANGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCA
GATATTCTTGCAGCTGCCATTCCCCCATTCATCAAAGAGAAATGTCAGAA
TATAGTCCTTGGTACTGGCAAAAAACCATGGNAGAGCAGCTTTGACAGTT
GGAGATACTGTACCCTGAGAAAGCCAGAGAGTAGCGAAAATCAATATTCC
TCTGGCGCATATGATTATAGCAGAGCTGATTTTATTTTGATCCNAGCAGA
ATTGAACTTGTGGCCTCATCAAT
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