EY659732

Overview
NameEY659732
Unique NameEY659732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_ALHEH (Glycogen synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.689e-21
Identity = 75/219 (34.25%), Postives = 115/219 (52.51%), Query Frame = 2
Query:  140 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP--AQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR-KTGI-KGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD---RNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKK 775
            V  A+DW T+L P  L+    P+        VF IHN+AY+G F  E    L LP  A      +F         GR + ++K G+  +D + TVSP YA+E+ +    G  LD ++R ++G+  GIVNG+D   WNP  D ++   Y       A+   + AL   +GL  D   R+ P++ F+GRL EQKG D++ AA+P  +    +  +LG+G++
Sbjct:  134 VLHAHDWQTALAPFLLQRRPVPR-----PATVFTIHNLAYRGLFPAETHTRLGLPPEAWTPEGLEF--------HGR-LAFIKGGLAYADAITTVSPTYAREIQTPAF-GCGLDGLLRHRSGVLHGIVNGIDTTVWNPAADPHLAACYRKPDPA-ARAANRAALAQRIGLDGDTGERSGPLLGFVGRLVEQKGVDLILAALPRLLAGGARLALLGSGER 336          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_METSB (Glycogen synthase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=glgA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.817e-21
Identity = 79/252 (31.35%), Postives = 122/252 (48.41%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            D  DN  RF+ LCQ           ++  + + P     +  A+DW   L   YL    + +        V  IHN+A+QG++  E  G L LP Q   S + ++ Y        I ++KA +  SD + TVSP YA E+ + E  G+ LD ++R    +  GI+NG+D + W+P +D  I   +D  T+   +P  K ALQ + GL  D    ++  + RL  QKG D+L A +    +   Q  VLG+G+
Sbjct:  106 DFPDNPFRFAALCQTG---------SALGFGAAPGFLPDIVHAHDWQAGLAAAYLHYDGRER-----PGTVATIHNLAFQGKYPAELLGALGLPPQ-AFSLEGVEYYGT------IGFLKAALALSDRITTVSPTYAAEIRTPEH-GMGLDGLLRTRAERLIGILNGIDDEVWDPSSDPLITEPFDVETLA-RRPANKAALQDKFGLDPDPGALLLGVVSRLSWQKGLDLLLANLDLLERLGVQLAVLGSGE 334          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_HELMI (Glycogen synthase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=glgA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.217e-21
Identity = 68/216 (31.48%), Postives = 108/216 (50.00%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            NDW        LK  Y+    Y+    V  +HN+ YQG F  +    + L        D ++ Y +      +N+MKAG++ +D++ TVS  YA+E+ + E  G  LD ++R   + + GIVNG+DV+ ++P TD +I   Y A  + + K   K  LQ + GLPV    P++  + RL +QKG D+         +E  Q +V+G G   +   F
Sbjct:  138 NDWQCGPAIALLKEEYRHHPAYRRIASVLTVHNLEYQGHFGRDILQFIGLRQDLFRP-DALEFYGQ------VNFMKAGLVFADLINTVSRTYAEEIQTSE-YGWGLDGLLRLRHSDLFGIVNGIDVEVYDPATDPHIPHHYSADNI-EGKKRNKAELQRQFGLPVS-EAPLLGLVHRLVDQKGIDLFEGIEEALFREDLQLVVVGQGDPRYEGLF 343          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_HALHL (Glycogen synthase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=glgA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.073e-20
Identity = 79/250 (31.60%), Postives = 126/250 (50.40%), Query Frame = 2
Query:   32 DNQLRFSLLCQ--AALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            DN  RF  L Q  AAL A  +L+  +            V   NDW T+L P +L+              VF IHN+AY+G F  E +  L LPA+     + ++ Y +      + ++K  ++ +D ++TVSP YA+E+ +    G  LD ++  R+  + GIVNG+D   W+P +D+++  +Y       A+   + A+   VGL      P++ F+GRL EQKG D++ AA+P  +    Q  +LG G
Sbjct:  107 DNHWRFLRLSQVAAALAAGDLLDWRAE-----------VLHGNDWQTALAPVFLRDRADRPA------TVFGIHNLAYRGLFPAELYPRLGLPAELWQP-EGLEFYGQ------LAFIKGSLVFADTLVTVSPTYAREIQTPAF-GWGLDGLLHHRRDRLFGIVNGIDTATWDPGSDRHLVAQYTGPDDR-ARAANRRAVARAVGLSEGEG-PILGFVGRLVEQKGVDLILAALPRLLAAGAQLALLGAG 329          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_RHITR (Glycogen synthase OS=Rhizobium tropici GN=glgA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.402e-20
Identity = 81/251 (32.27%), Postives = 124/251 (49.40%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            D+ DN  RF+ L  A  E    L           +  D+V  A+DW ++L+P Y++  Y P     S   V  IHNIA+QG+F  + F  L LPA    S + I+ Y        + ++K G+  +  + TVSP YA+E+++ E  G+ L+ +I  +   + GIVNG+D   WNP TD  I   Y A+T+ + + + +  +    GL  D   P+   + RL  QKG DILA      +    +  +LG G
Sbjct:  103 DYPDNWRRFAALSLAGAEIAAGLLPG--------WRPDLVH-AHDWQSALVPVYMR--YYPTPELPS---VLTIHNIAFQGQFGADIFPGLRLPAH-AFSVEGIEYYGD------VGFLKGGLQTAHALTTVSPSYAEEILTPEF-GMGLEGVIASKAYNLYGIVNGIDADIWNPATDPMIAQTYSAATLKE-RAINRHRVVEHFGLEEDDG-PIFCVVSRLTWQKGMDILAEVASEVVHMGGKLAILGAG 329          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_GLOVI (Glycogen synthase OS=Gloeobacter violaceus GN=glgA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.831e-20
Identity = 72/213 (33.80%), Postives = 110/213 (51.64%), Query Frame = 2
Query:  140 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEK-CQNIVLGTG 769
            V   +DWHT L+P ++++M            VF IHN+AYQG            P  +  +F      + P      N M AGI+ SD +  VSP YA+E+ + E  G  LD ++R  G  + GI+NG++ +  +P TDK++ V YD +T +D +   K ALQ E G  V  +  ++  + RL +QKG D+LA     ++     Q +VLG+G
Sbjct:  124 VLHCHDWHTGLLPLWMRSM--------PVMTVFTIHNLAYQGP-----------PLPYFRAF-----VDVPYDTGAWNPMVAGIIHSDAITAVSPTYAREICTPE-YGERLDGLLRGQGNRLTGILNGINTKALDPATDKHLTVNYD-TTSLDRRVENKLALQREFGFEVSADRLLVGIVSRLVDQKGFDLLAPLWDNWMHTSGAQLVVLGSG 310          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_OCEIH (Glycogen synthase OS=Oceanobacillus iheyensis GN=glgA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.391e-20
Identity = 78/263 (29.66%), Postives = 132/263 (50.19%), Query Frame = 2
Query:  140 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF---AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDSWRYCTLRKPESSENQY----SSGAYDYSRADFILIXAE 901
            V  A+DW T +     K +Y+P    +    VF IHNI YQG      F+DF        F+   + + G       + IN +K+GI  +D + TVSP YA+E+++    G  L+ ++  R+  + G++NG+D++++NP  DK + V Y ++     K   ++ L  E+GL +   +P+   + RL EQKG  ++   +  F++E  Q IVLG G++ +   F    Y   R P+          S     Y+ ADF+L+ ++
Sbjct:  130 VLHAHDWQTGIAVALAK-IYQP---IEELITVFTIHNIYYQGTMPLTTFDDF--------FQLGREHLAGMEW---NQMINSLKSGIFHADKITTVSPTYAEEILTPY-YGAGLEEMLWNRREDLIGVLNGIDLKDYNPAIDKSLPVNYRSAR--SKKIENRKLLYEEIGLNLKDGVPLYIMVTRLVEQKGIHLVQRILEEFLQEDIQLIVLGNGEQEFEYYFKDIEY---RYPDKMITHLHFNESLARRLYASADFLLMPSK 371          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_SYNP6 (Glycogen synthase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=glgA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.123e-20
Identity = 82/267 (30.71%), Postives = 126/267 (47.19%), Query Frame = 2
Query:   29 QDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKV--VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKKPWXSSFDSWRYCT 814
            +D   RF+     A E            FS  Y +  V   +DWHT +IP +         M++S  +  VF IHN+AYQG + ++   +   P   +                  + M A +L +D V TVSP YAQ++ +    G +L+ ++      + GI+NG+DV  +NP TD  I    D  T +D +   K ALQ E+GL V+ +  +I F+ RL EQKG D+L   +  F+     Q +VLGTG++ + +    W   T
Sbjct:   99 EDEDWRFTFFANGAAE------------FSWNYWKPQVIHCHDWHTGMIPVW---------MHQSPDISTVFTIHNLAYQGPWRWKLEKITWCPWYMQGD----------------STMAAALLYADRVNTVSPTYAQQIQT-PTYGEKLEGLLSFISGKLSGILNGIDVDSYNPATDTRIVANCDRDT-LDKRLNNKLALQKEMGLEVNPDRFLIGFVARLVEQKGIDLLLQILDRFLSYSDAQFVVLGTGERYYETQL--WELAT 324          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA1_RHIRD (Glycogen synthase 1 OS=Rhizobium radiobacter GN=glgA1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.123e-20
Identity = 80/251 (31.87%), Postives = 126/251 (50.20%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            D+ DN  RF+ L   +L A RI            +  D+V  A+DW  ++ P Y++    P+        +  IHNIA+QG+F    F  L LPA      + I+ YN       ++++K G+  +  + TVSP YA+E+++ E  G+ L+ +I  R   + GIVNG+D   WNP TD  I   Y A+ + + + L K+A+     +  D   P+   I RL  QKG D++A A+   +    + +VLG G
Sbjct:  103 DYPDNWKRFAAL---SLAAARI-----GAGVLPGWRPDMVH-AHDWQAAMTPVYMRYAETPE-----IPSLLTIHNIAFQGQFGANIFSKLALPAH-AFGMEGIEYYND------VSFLKGGLQTATALSTVSPSYAEEILTAEF-GMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKN-RALNKKAVAEHFRID-DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAG 329          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA1_AGRT5 (Glycogen synthase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.123e-20
Identity = 80/251 (31.87%), Postives = 126/251 (50.20%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            D+ DN  RF+ L   +L A RI            +  D+V  A+DW  ++ P Y++    P+        +  IHNIA+QG+F    F  L LPA      + I+ YN       ++++K G+  +  + TVSP YA+E+++ E  G+ L+ +I  R   + GIVNG+D   WNP TD  I   Y A+ + + + L K+A+     +  D   P+   I RL  QKG D++A A+   +    + +VLG G
Sbjct:  103 DYPDNWKRFAAL---SLAAARI-----GAGVLPGWRPDMVH-AHDWQAAMTPVYMRYAETPE-----IPSLLTIHNIAFQGQFGANIFSKLALPAH-AFGMEGIEYYND------VSFLKGGLQTATALSTVSPSYAEEILTAEF-GMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKN-RALNKKAVAEHFRID-DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAG 329          
The following BLAST results are available for this feature:
BLAST of EY659732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
GLGA_ALHEH3.689e-2134.25Glycogen synthase OS=Alkalilimnicola ehrlichei (st... [more]
GLGA_METSB4.817e-2131.35Glycogen synthase OS=Methylocella silvestris (stra... [more]
GLGA_HELMI8.217e-2131.48Glycogen synthase OS=Heliobacterium modesticaldum ... [more]
GLGA_HALHL1.073e-2031.60Glycogen synthase OS=Halorhodospira halophila (str... [more]
GLGA_RHITR1.402e-2032.27Glycogen synthase OS=Rhizobium tropici GN=glgA PE=... [more]
GLGA_GLOVI1.831e-2033.80Glycogen synthase OS=Gloeobacter violaceus GN=glgA... [more]
GLGA_OCEIH2.391e-2029.66Glycogen synthase OS=Oceanobacillus iheyensis GN=g... [more]
GLGA_SYNP63.123e-2030.71Glycogen synthase OS=Synechococcus sp. (strain ATC... [more]
GLGA1_RHIRD3.123e-2031.87Glycogen synthase 1 OS=Rhizobium radiobacter GN=gl... [more]
GLGA1_AGRT53.123e-2031.87Glycogen synthase 1 OS=Agrobacterium tumefaciens (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659732 ID=EY659732; Name=EY659732; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGACTGGAGAGTGACCACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGG
TGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTA
AGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGAC
AAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCC
TCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAA
ATATTCCTGTCATANGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCA
GATATTCTTGCAGCTGCCATTCCCCCATTCATCAAAGAGAAATGTCAGAA
TATAGTCCTTGGTACTGGCAAAAAACCATGGNAGAGCAGCTTTGACAGTT
GGAGATACTGTACCCTGAGAAAGCCAGAGAGTAGCGAAAATCAATATTCC
TCTGGCGCATATGATTATAGCAGAGCTGATTTTATTTTGATCCNAGCAGA
ATTGAACTTGTGGCCTCATCAAT
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