EY659732

Overview
NameEY659732
Unique NameEY659732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_SYNR3 (Glycogen synthase OS=Synechococcus sp. (strain RCC307) GN=glgA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.509e-19
Identity = 68/215 (31.63%), Postives = 104/215 (48.37%), Query Frame = 2
Query:  140 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKK 775
            V   +DWHT +IP ++               VF IHN+ YQG + ++   +   P   +                  + M A +L +D V  VSP YAQE+ + E  G +L+ ++      ++GI+NG+DV+ WNP TD  I   Y  +  +  K + K ALQ  +GL V+ +  VI  + RL +QKG D+L      F+     Q +VLGTG +
Sbjct:  124 VLHCHDWHTGMIPVWMH-------QDPEISTVFTIHNLKYQGPWRWKLERMTWCPWYMQGD----------------HTMAAALLYADRVNAVSPTYAQEIRTPE-YGEQLEGLLNYISGKLRGILNGIDVEAWNPATDSRIPATYSTAD-LSGKAVCKRALQERMGLQVNPDTFVIGLVSRLVDQKGVDLLLQVAERFLAYTDTQIVVLGTGDR 313          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_JANSC (Glycogen synthase OS=Jannaschia sp. (strain CCS1) GN=glgA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.509e-19
Identity = 87/303 (28.71%), Postives = 136/303 (44.88%), Query Frame = 2
Query:   20 SDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNL-PAQFKSS-FDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDSWRYCTLRKPESSENQYSSGAYDYSRADFILIXAELNLWP 916
            +D  DN  RF+ L  AA               +G +  DVV   +DW   L+P YL       G+      +  IHN+A+ G    E    L L P +F +  ++F           +I+ +KAG++ +  + TVS  YA+EL++ +  G+ +D ++R  +  + GIVNG+D+  WNP TD  I       T    K   K ALQAE GL      P+   + RL +QKG D+L  A+   ++   Q  VLG+G             C L + ++  N      YD + +  ++   +  L P
Sbjct:  101 ADWPDNAERFAALSYAAAHVAA--------KGAGDWRADVVH-GHDWQAGLVPEYLA------GLGCDTPFILTIHNVAFHGNTGAEKLDALRLDPDRFNADQYEFWG---------QISALKAGLMGAAQITTVSQTYAEELMTPQF-GMGMDGVLRHRRDALTGIVNGIDLDVWNPETDPQI----TPYTTFKGKAANKAALQAEFGLSKAPG-PLCVLVSRLTDQKGIDLLLDAMHVVLERGGQVAVLGSGA-------PDLEVCLLERADAEPNLAVKIGYDEALSHRMMAGGDCILVP 366          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_FUSNN (Glycogen synthase OS=Fusobacterium nucleatum subsp. nucleatum GN=glgA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.509e-19
Identity = 79/264 (29.92%), Postives = 125/264 (47.35%), Query Frame = 2
Query:   32 DNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF---AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDSWRY 808
            D+  RF   C+A +E   I     +           +   NDW ++LIP YLK     +G+Y   K +F IHN+ +QG F     ED   ++    F+   D +  Y+       I+++K G++ SD + TVS  YA+E+ + ++ G  +  + +K   K  GIVNG+D   + PL+ K                +LK  LQ ++GL V+ + P+I  I RL+ QKG D +       +    Q I+LGTG+K +   F    Y
Sbjct:  104 DDCERFLFFCKAVVETMDITKFKPD-----------IIHCNDWQSALIPIYLKE----RGIY-DVKTIFTIHNLRFQGFFFNNVIEDLLEIDRAKYFQE--DGLKYYDM------ISFLKGGVVYSDYITTVSDSYAEEIKT-QELGEGIHGLFQKYDYKLSGIVNGIDKISY-PLSKK-------------PHKILKADLQKKLGLDVEEDTPLIVIITRLDRQKGLDYIVEKFDEMMSLGIQFILLGTGEKRYEHFFAYQEY 328          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA1_ANASP (Glycogen synthase 1 OS=Anabaena sp. (strain PCC 7120) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.004e-18
Identity = 75/251 (29.88%), Postives = 118/251 (47.01%), Query Frame = 2
Query:   32 DNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKK 775
            D   RF+L    A E            F   Y +  +   +DWHT +IP ++               VF IHN+AYQG + +    +   P        ++ G+N          M A +  +D V TVSP YA+++ +    G +++ ++      + GIVNG+D + ++P  DKYI   + A T +D +   K ALQ EVGL V+ N  +I  + RL EQKG D++   +  F+     Q ++LGTG +
Sbjct:  100 DEDWRFTLFSNGAAE------------FCWNYWKPDIIHCHDWHTGMIPVWMNQS-------PDITTVFTIHNLAYQGPWRWYLDKITWCPW-------YMQGHNT---------MAAAVQFADRVNTVSPTYAEQIKTPA-YGEKIEGLLSFISGKLSGIVNGIDTEVYDPANDKYIAQTFTADT-LDKRKANKIALQEEVGLEVNSNAFLIGMVTRLVEQKGLDLVIQMLDRFMAYTDAQFVLLGTGDR 313          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_THICR (Glycogen synthase OS=Thiomicrospira crunogena (strain XCL-2) GN=glgA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.312e-18
Identity = 74/214 (34.58%), Postives = 107/214 (50.00%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV-MDAKPLLKEALQAEVGLP---VDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKE-KCQNIVLGTG 769
            NDW T L+   L    +        K VF IHN+AY G F    F  L LP  +    D I+ Y+       ++ +KAGI  +D V TVSP YA+E+   E   G+E  L   + +  + GI+NG+D   WNP TD +I   Y      + AK   K+ +     LP   VD + PVI  +GRL  QKG D++   +P  I++   + +++GTG
Sbjct:  143 NDWQTGLVSALLTLEAE------RPKTVFTIHNMAYAGLFPKSLFEGLGLPWSWWEPHDGIEFYDN------MSMLKAGIQMADWVTTVSPTYAKEITFPEYAYGLEGVLIKRLDEGRLVGILNGIDHDVWNPKTDPFIRYHYSVDKGRVAAKKRNKKDMLDFWDLPKAVVDADDPVIGLVGRLVPQKGIDLVLEVLPELIEQTNVRFVIVGTG 344          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_BACHD (Glycogen synthase OS=Bacillus halodurans GN=glgA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.312e-18
Identity = 70/211 (33.18%), Postives = 109/211 (51.66%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFG-LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVS---GEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFI-KEKCQNIVLGTG 769
            +DW + LIP Y+KT      +      VF IHN+ YQG F  + F  LL+   +  +  + +DG         IN++K  ++ SD V TVSP YAQE+ +   GE     L     KT  +GI+NG+D+++++P TD ++   Y  + +   K   K+ +Q    LP  ++IP+I  + RL E+KG  +L       +  E  Q  +LGTG
Sbjct:  132 HDWQSGLIPAYMKT----GSVENPVPTVFTIHNLRYQGAFPPDVFRELLHFAPEHFAGLE-MDG--------AINFLKGALVHSDRVTTVSPTYAQEIQTPAFGEGLHGLLHQERGKT--RGILNGIDLEDFDPKTDPHVTYPYKHNQMEKRKN--KQVIQRLFELPERKDIPLIAMVSRLVEEKGVPLLTQIAGELVTTENVQLAILGTG 325          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA2_ANAVT (Glycogen synthase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgA2 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.238e-18
Identity = 74/251 (29.48%), Postives = 118/251 (47.01%), Query Frame = 2
Query:   32 DNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKK 775
            D   RF+L    A E            F   Y +  +   +DWHT +IP ++               VF IHN+AYQG + +    +   P        ++ G+N          M A +  +D V TVSP YA+++ +    G +++ ++      + GIVNG+D + ++P  DK+I   + A T +D +   K ALQ EVGL V+ N  +I  + RL EQKG D++   +  F+     Q ++LGTG +
Sbjct:  100 DEDWRFTLFSNGAAE------------FCWNYWKPEIIHCHDWHTGMIPVWMNQS-------PDITTVFTIHNLAYQGPWRWYLDKITWCPW-------YMQGHNT---------MAAAVQFADRVNTVSPTYAEQIKTPA-YGEKIEGLLSFISGKLSGIVNGIDTEVYDPANDKFIAQTFTADT-LDKRKANKIALQEEVGLEVNSNAFLIGMVTRLVEQKGLDLVIQMLDRFMAYTDAQFVLLGTGDR 313          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA2_ANASP (Probable glycogen synthase 2 OS=Anabaena sp. (strain PCC 7120) GN=glgA2 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.238e-18
Identity = 79/249 (31.73%), Postives = 122/249 (49.00%), Query Frame = 2
Query:   32 DNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGL--LNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGT 766
            D+ +RF+   +AALE        SNK        D++   +DW T LIP  L  +YK  GM  + +V + IHN  +QG    +      LN  A +       D +N       +N+MK GI+ S+ V TVSP++A E     D G  L + +   K    G++NG+D   WNP  D++I   Y      + K   K+AL+  + L    + P+I +IGRL+ QKG  ++  AI   + +  Q ++LG+
Sbjct:  107 DDDMRFAFFSKAALEFLH----QSNKR------PDIIH-CHDWQTGLIPVMLYEIYKYHGM-DTQRVCYTIHNFKHQGIGGVKTLWATGLNREAYYFQDDKLRDDHNPFA----LNYMKGGIVYSNAVTTVSPNHALE-AQYTDVGCGLGHTLYLHKEKFSGVLNGIDYDFWNPEIDRHIPDNYSQDD-FEQKLYNKKALRERLLLQA-ADKPIIAYIGRLDNQKGVHLVHHAIYHALNKGAQFVLLGS 336          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA1_SYNY3 (Glycogen synthase 1 OS=Synechocystis sp. (strain PCC 6803) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.238e-18
Identity = 72/231 (31.17%), Postives = 116/231 (50.22%), Query Frame = 2
Query:   98 NSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKV--VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKK 775
            N    F+  + +  +   +DWHT +IP +         M++S  +  VF IHN+AYQG +     GLL                  P   +  N M A I  ++ V TVSP YAQ++ +    G +L+ ++      + GI+NG+D + +NP  D++I   +DA + +D +   K A+Q E GL ++RN  V+  + RL EQKG D++   +  F+     Q I+LGTG +
Sbjct:  110 NGAAEFAWNHWKPEIIHCHDWHTGMIPVW---------MHQSPDIATVFTIHNLAYQGPWR----GLLETMTWC------------PWYMQGDNVMAAAIQFANRVTTVSPTYAQQIQTPA-YGEKLEGLLSYLSGNLVGILNGIDTEIYNPAEDRFISNVFDADS-LDKRVKNKIAIQEETGLEINRNAMVVGIVARLVEQKGIDLVIQILDRFMSYTDSQLIILGTGDR 313          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PARDP (Glycogen synthase OS=Paracoccus denitrificans (strain Pd 1222) GN=glgA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.923e-18
Identity = 79/270 (29.26%), Postives = 122/270 (45.19%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEA---------PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF--KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            D  DN  RF+ LC+AA            P++L+L+                  DW   L P YL+     +   +  + +  IHNIA+QG         L LPA     S F++           +I+ +KAGI+ +D V TVSP YA+EL++ E  G+ ++ ++  R     GI+NG+D+  W P                  K   + AL+ E GLP + + P+   + RL  QKG D+L  A+P  ++   Q  VLG+G     ++F
Sbjct:  104 DWPDNPQRFAALCKAAALIAAEGVEDWRPQVLHLH------------------DWQAGLTPIYLR-----QAGVRDVRTLLTIHNIAFQGLAPAHMLSALQLPAHLFNPSGFEYWG---------RISALKAGIVFADKVSTVSPTYAEELMTPE-FGMGMEGVLADRAGDFTGILNGIDLDAWKP-----------PYATPQGKAPHRAALRKEFGLP-ETDGPLCVVVSRLTGQKGLDLLIEALPALLENGGQLAVLGSGDPGLEAAF 328          
The following BLAST results are available for this feature:
BLAST of EY659732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
GLGA_SYNR34.509e-1931.63Glycogen synthase OS=Synechococcus sp. (strain RCC... [more]
GLGA_JANSC4.509e-1928.71Glycogen synthase OS=Jannaschia sp. (strain CCS1) ... [more]
GLGA_FUSNN4.509e-1929.92Glycogen synthase OS=Fusobacterium nucleatum subsp... [more]
GLGA1_ANASP1.004e-1829.88Glycogen synthase 1 OS=Anabaena sp. (strain PCC 71... [more]
GLGA_THICR1.312e-1834.58Glycogen synthase OS=Thiomicrospira crunogena (str... [more]
GLGA_BACHD1.312e-1833.18Glycogen synthase OS=Bacillus halodurans GN=glgA P... [more]
GLGA2_ANAVT2.238e-1829.48Glycogen synthase 2 OS=Anabaena variabilis (strain... [more]
GLGA2_ANASP2.238e-1831.73Probable glycogen synthase 2 OS=Anabaena sp. (stra... [more]
GLGA1_SYNY32.238e-1831.17Glycogen synthase 1 OS=Synechocystis sp. (strain P... [more]
GLGA_PARDP2.923e-1829.26Glycogen synthase OS=Paracoccus denitrificans (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659732 ID=EY659732; Name=EY659732; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGACTGGAGAGTGACCACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGG
TGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTA
AGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGAC
AAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCC
TCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAA
ATATTCCTGTCATANGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCA
GATATTCTTGCAGCTGCCATTCCCCCATTCATCAAAGAGAAATGTCAGAA
TATAGTCCTTGGTACTGGCAAAAAACCATGGNAGAGCAGCTTTGACAGTT
GGAGATACTGTACCCTGAGAAAGCCAGAGAGTAGCGAAAATCAATATTCC
TCTGGCGCATATGATTATAGCAGAGCTGATTTTATTTTGATCCNAGCAGA
ATTGAACTTGTGGCCTCATCAAT
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