EY659732

Overview
NameEY659732
Unique NameEY659732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig219 contig Csv1_Contig219:856..1777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_THELT (Glycogen synthase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glgA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.464e-34
Identity = 91/235 (38.72%), Postives = 131/235 (55.74%), Query Frame = 2
Query:   95 LNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI--IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            + + KY S  +  D+V  A+DW T L+P YLKT+Y+    +     VF IHN+ YQG F         LPA +  + D ++ Y       +IN++K GIL SD+V TVSP YAQE +  E  G +LD +  +R   + GI+NG+D  E+NP TDK I V YD   + + K + K  LQ E+ L V  ++P+I  I RL +QKG D++   +   +    Q +VLGTG K +   F
Sbjct:  122 IEAMKYLSETF--DIVH-AHDWQTGLVPVYLKTLYRTDPFFNRTATVFTIHNLGYQGVFNPGYMKFAGLPA-YLFNIDGLEFYG------QINFLKGGILFSDIVTTVSPTYAQE-IQTEQFGEKLDGVLRLRAEDLYGILNGIDYSEYNPATDKRIYVNYDIDHI-EKKKMNKSELQKELNLQVRDDVPLIGMINRLVDQKGLDLIEKIVDYMMMFDIQFVVLGTGDKKYEEFF 344          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_FERNB (Glycogen synthase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=glgA PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.463e-33
Identity = 87/222 (39.19%), Postives = 134/222 (60.36%), Query Frame = 2
Query:  134 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            D+V V NDW T+LIP YLKT+++   +      V  IHN+ YQG F  E      LP  +  + D I+ Y       KIN++K GI+ SD++ TVSP YA+E +  ++ G +L+ ++  R + + GI+NG+D +E+NPLTD  I V YD +T+ + K   K+ LQ E+GLP +R++P+   I RL +QKG DI+A  +        Q ++LGTG++ + + F
Sbjct:  134 DIVHV-NDWQTALIPVYLKTVFRDDPLLSKIATVLTIHNLGYQGIFEPEYLRFAGLP-DYLYNIDGIEFYG------KINFLKGGIIFSDIINTVSPTYAKE-IQQKEYGEKLEGVLRARSSDLYGILNGIDYEEFNPLTDNKIYVNYDLNTI-EKKKENKKLLQKELGLP-ERDVPMFGMINRLVDQKGLDIMAEIMDYVSLFDIQFVLLGTGEEKYENMF 344          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_ANAD2 (Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=glgA PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.463e-33
Identity = 92/261 (35.25%), Postives = 136/261 (52.11%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQ-FK-SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            DH DN  RF+ L +AAL  P  L L              +   NDW   L P  L+  +        A+ VF IHN+AYQG F  +    L LP + F+  + +F D         ++++MKAG+  +D + TVSP YA+E+++ E  G  LD ++R     + GI+NG+DV  W+P  D ++   + A   +  K   K ALQ EVGLPV   +PV   + RL EQKG D++AAA+P  +    Q ++LG+G   +  +F
Sbjct:  101 DHGDNAERFAFLTRAALALPAALGLRPR-----------ILHLNDWQCGLGPWLLRHEHARDPALAGARTVFTIHNLAYQGLFPKQVLPALGLPWEVFRWEAMEFFD---------QLSFMKAGLAFADALTTVSPTYAREILTPEG-GASLDALLRHRARDLHGILNGIDVHAWDPARDPHLPAHFGAGD-LTGKAACKAALQREVGLPVRPEVPVAGLVTRLAEQKGIDLVAAALPALLARDVQVVLLGSGDAAYEQAF 339          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_ANASK (Glycogen synthase OS=Anaeromyxobacter sp. (strain K) GN=glgA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.201e-33
Identity = 92/261 (35.25%), Postives = 136/261 (52.11%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQ-FK-SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            DH DN  RF+ L +AAL  P  L L              +   NDW   L P  L+  +        A+ VF IHN+AYQG F  +    L LP + F+  + +F D         ++++MKAG+  +D + TVSP YA+E+++ E  G  LD ++R     + GI+NG+DV  W+P  D ++   + A  +   K   K ALQ EVGLPV   +PV   + RL EQKG D++AAA+P  +    Q ++LG+G   +  +F
Sbjct:  101 DHGDNAERFAFLTRAALALPGALGLRPR-----------ILHLNDWQCGLGPWLLRHEHARDPALAGARTVFTIHNLAYQGLFPKQVLPALGLPWEVFRWEAMEFFD---------QLSFMKAGLAFADALTTVSPTYAREILTPEG-GASLDALLRHRARDLHGILNGIDVHAWDPARDPHLPAHFTAGDLA-GKAACKAALQREVGLPVRPEVPVAGLVTRLAEQKGIDLVAAALPALLARDVQVVLLGSGDPAYQETF 339          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_ANADE (Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=glgA PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.358e-33
Identity = 91/261 (34.87%), Postives = 136/261 (52.11%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQ-FK-SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            DH DN  RF+ L +AAL  P  L L              +   NDW   L P  L+  +        A+ VF IHN+AYQG F  +    L LP + F+  + +F D         ++++MKAG+  +D + TVSP YA+E+++ E  G  LD ++R     + GI+NG+DV  W+P  D ++   +    +   K   K ALQ EVGLPV R+ P+   + RL EQKG D++AAA+P  +    Q ++LG+G   +  +F
Sbjct:  101 DHPDNAERFAFLTRAALALPGALGLRPR-----------ILHLNDWQCGLGPWLLRHEHARDPALAGARTVFTIHNLAYQGLFPKQVLPALGLPWEVFRWEAMEFFD---------QLSFMKAGLAFADALTTVSPTYAREILTPEG-GASLDALLRHRARDLHGILNGIDVHAWDPARDPHLPAHFTPGELA-GKAACKAALQREVGLPVRRDAPLAGLVTRLAEQKGIDLVAAALPALLARDVQVVLLGSGDPAYEEAF 339          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_CELJU (Glycogen synthase OS=Cellvibrio japonicus (strain Ueda107) GN=glgA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.222e-32
Identity = 92/252 (36.51%), Postives = 141/252 (55.95%), Query Frame = 2
Query:   20 SDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            +D  DN LRF    +AA EA  +     N      +  D+V   NDW T LIP  L    +          +F IHN+AY+G F+++ FG LNLP  F    + ++ Y +      +++MK G+  +D + TVSP YAQE+   E  G  LD +IR  +  + GI+NG+D  EWNP  DK++   Y+  T+ + K   K ALQ  +GL ++ ++P++ FIGRL +QKG D++   +P  +++ CQ +VLG+G
Sbjct:  106 NDWYDNHLRFYWFARAA-EAIALNQAGLN------WQPDIVH-CNDWQTGLIPALLSLHPERPA------TLFTIHNLAYRGLFSYQAFGELNLPPAFWHH-ERLEFYGQ------MSFMKGGLAFADFITTVSPSYAQEIQLPEH-GYGLDGLIRYRQESLSGILNGIDTDEWNPGKDKHLAATYNRRTLGN-KTKNKLALQETLGLALNADVPLLGFIGRLVDQKGIDLILNQLPLLLEQDCQLVVLGSG 334          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_OPITP (Glycogen synthase OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.085e-32
Identity = 89/254 (35.04%), Postives = 139/254 (54.72%), Query Frame = 2
Query:   17 ESDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            E D++DN  RF   C+  +E  R+ ++ +          DVV  A+DW  +L+P  L+   + +G   + K +F IHNIA+QG F    F   NLP +  +S D ++ Y       +IN+MKAGIL +D V TVSP YA+E+ + E  G  LD ++  R++ + G++NG+D + WNP TD  +  +Y  +  +  K + +  L    G   D + PV   + RL EQKG D++ A    F+ + C+ IVLG G+
Sbjct:  105 ERDYEDNSDRFIFFCKGVVETLRLADMQA----------DVVH-AHDWQAALLPLLLREAERRQGGMLAMKTIFTIHNIAFQGIFPRAVFARTNLPDEL-NSVDGLEYY------EQINFMKAGILFADRVTTVSPRYAEEIQTPE-FGCGLDGVVQTRESDLVGLLNGVDTKVWNPATDPLLPARYSRAD-LAGKRVCRAELLKRFGFAPDFDGPVFGMVCRLAEQKGVDLVLANQGFFLSQSCRLIVLGAGE 338          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_EXIS2 (Glycogen synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=glgA PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.723e-32
Identity = 86/266 (32.33%), Postives = 143/266 (53.76%), Query Frame = 2
Query:   11 GLESDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDV--VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFG-LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            G+   H D+  RF+   +A LE  + ++            E+V  V   +DW T ++P +L+  Y+    Y+  K VF IHN+ YQG F  E  G LL L  +  ++               +N+MKAG++ ++ + TVSP Y  E++     G  L+ ++  R   ++GI+NG+D ++++P TD+++   YD  TV + K   K ALQ E+GLPV+ ++P+  F+ RL +QKG D+LA  +P   +   Q I+LG+G+  +   F
Sbjct:   97 GVIYGHYDDAERFAYFSRAVLEMIQRVD-----------AEEVPDVIHCHDWQTGVLPAFLRIHYQHLNRYQEIKTVFTIHNLQYQGVFPEEVLGDLLGLSHEHFTAEGI-------AHNGLVNYMKAGLVHANQITTVSPSYRDEIMDPY-YGETLEPVLQHRAVDVRGILNGIDYRQFSPETDEHLVENYDVKTVEEGKAANKAALQQELGLPVNPDVPLFGFVSRLVDQKGIDLLAHILPDLFELDAQFIILGSGEAEYEGLF 343          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_ANOFW (Glycogen synthase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=glgA PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.723e-32
Identity = 86/252 (34.13%), Postives = 133/252 (52.78%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFG-LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            H D+  RFS  C+A L+   +++   N           V   +DWHT +IP  L+  Y     Y   K VF IHN+ +QG F  E  G LLNL  ++  S + ++ Y        +++MK  ++ + ++ TVSP Y +E+ +    G  LD ++R   + + GI+NG+D + +NP  D YI V YD +T+   K + K ALQ    LP + ++PVI  + RL +QKG D++       I E  Q I+LGTG+
Sbjct:  101 HYDDGERFSYFCRAVLDCLPVIDFQPN-----------VIHCHDWHTGMIPFLLREEYMRNSFYAQMKTVFTIHNLQFQGIFPREILGDLLNLSDRY-FSIEHLEFYGH------VSFMKGALVSAHLITTVSPTYKEEIQTPY-YGERLDGLLRARSSHLVGILNGIDDEIYNPKKDPYIAVPYDVTTIA-RKSINKRALQQHFSLPSEEDVPVIAIVSRLTKQKGLDLVKCVFHEIIAEHVQMIILGTGE 332          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_THESQ (Glycogen synthase OS=Thermotoga sp. (strain RQ2) GN=glgA PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.556e-32
Identity = 89/247 (36.03%), Postives = 137/247 (55.47%), Query Frame = 2
Query:   59 CQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            C A L+  + L+L            D+V V NDW T+LIP YLKT+Y+    +     V  IHN+ YQG F  +      LP  +  + D ++ Y      R++N++K GI+ SD++ TVSP YA+E +  E+ G +L+ ++  R   + GI+NG+D + +NP TD+YI V YD +  ++ K   K  LQ E+GLPV++   V   I RL  QKG D+L   +   +    Q +VLGTG + + ++F
Sbjct:  118 CAATLDLVKHLDLKP----------DIVHV-NDWQTALIPVYLKTVYRDDPYFSRTATVLTIHNLGYQGVFDPKYLSFAGLP-DYVFTIDGLEFY------RQLNFLKGGIVFSDVINTVSPTYAEE-IQTEEYGEKLEGVLRMRSKDLYGILNGIDYELYNPATDRYIYVNYDVNR-LELKWENKVKLQEELGLPVNKETAVAGLISRLVPQKGLDLLVDVMDYLMLFDLQIVVLGTGDEQYENAF 344          
The following BLAST results are available for this feature:
BLAST of EY659732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
GLGA_THELT8.464e-3438.72Glycogen synthase OS=Thermotoga lettingae (strain ... [more]
GLGA_FERNB2.463e-3339.19Glycogen synthase OS=Fervidobacterium nodosum (str... [more]
GLGA_ANAD22.463e-3335.25Glycogen synthase OS=Anaeromyxobacter dehalogenans... [more]
GLGA_ANASK4.201e-3335.25Glycogen synthase OS=Anaeromyxobacter sp. (strain ... [more]
GLGA_ANADE9.358e-3334.87Glycogen synthase OS=Anaeromyxobacter dehalogenans... [more]
GLGA_CELJU1.222e-3236.51Glycogen synthase OS=Cellvibrio japonicus (strain ... [more]
GLGA_OPITP2.085e-3235.04Glycogen synthase OS=Opitutus terrae (strain DSM 1... [more]
GLGA_EXIS22.723e-3232.33Glycogen synthase OS=Exiguobacterium sibiricum (st... [more]
GLGA_ANOFW2.723e-3234.13Glycogen synthase OS=Anoxybacillus flavithermus (s... [more]
GLGA_THESQ3.556e-3236.03Glycogen synthase OS=Thermotoga sp. (strain RQ2) G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659732 ID=EY659732; Name=EY659732; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGACTGGAGAGTGACCACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGG
TGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTA
AGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGAC
AAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCC
TCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAA
ATATTCCTGTCATANGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCA
GATATTCTTGCAGCTGCCATTCCCCCATTCATCAAAGAGAAATGTCAGAA
TATAGTCCTTGGTACTGGCAAAAAACCATGGNAGAGCAGCTTTGACAGTT
GGAGATACTGTACCCTGAGAAAGCCAGAGAGTAGCGAAAATCAATATTCC
TCTGGCGCATATGATTATAGCAGAGCTGATTTTATTTTGATCCNAGCAGA
ATTGAACTTGTGGCCTCATCAAT
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