EY659732

Overview
NameEY659732
Unique NameEY659732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_RHILW (Glycogen synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=glgA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.817e-18
Identity = 80/255 (31.37%), Postives = 122/255 (47.84%), Query Frame = 2
Query:   14 LESDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            L  D+ DN  RF+ L  AA E    L           +  D+V   +DW  +L   Y++  Y P     S   V  IHNIA+QG+F  E F  L LPA   ++ D I+ Y        + ++K G+  +  + TVSP YA E+++ E  G+ L+ +I      + GIVNG+D   WNP TD  +   Y  +T+ + +   +    AE     + + P+   I RL  QKG DI+A      +    + +VLG+G+
Sbjct:  100 LGKDYPDNWRRFAALSLAASEIAAGLLPG--------WRPDLVHT-HDWQAALTSVYMR--YYPTPELPS---VLTIHNIAFQGQFGPEIFPGLRLPAHAFAT-DSIEYYGT------VGYLKGGLQTAHAITTVSPTYADEILTPEF-GMGLEGVIASHIDNLHGIVNGIDTDIWNPATDPVVHTHYGPTTLKNREENRRSI--AEFFHLDNDDAPIFCVISRLTWQKGMDIVANIADEIVAMGGKLVVLGSGE 330          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_RALSO (Glycogen synthase OS=Ralstonia solanacearum GN=glgA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.817e-18
Identity = 74/260 (28.46%), Postives = 126/260 (48.46%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALE-APRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK--EKCQNIVLGTGKKPWXSS 790
            + DN LRF+    AA   A  + +L +          D+V  A+DWH +L+P  +K   +P       K V  +HN+A+QG F       L LP +      F   ++         ++KAG++ +D + TVS  YA+E+++ +  G  + +++  R+  +  I+NG+D   WNP  D Y+   + A   +  K   K  LQ  + LP D + P++    RL  QK +D+   A+P  ++     Q  VLG G++ + S+
Sbjct:  108 YADNALRFAAFSHAAAHVAGGVPDLPAF---------DIV-QAHDWHAALVPLLVKRAGRP------VKTVLTVHNLAFQGNFPPRIAQDLGLPPEAVREAGFFGQFS---------FLKAGLMWADRITTVSRTYAREILT-DAFGYGMQDVLRARRHDLVAILNGIDNAVWNPSKDAYLSRPFFAGN-LSGKHAAKLQLQTLLRLPKDAHAPLLALGSRLTHQKMADVALQALPQMLEAHPDLQVAVLGCGERRYESA 340          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PROM3 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9303) GN=glgA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.985e-18
Identity = 70/257 (27.24%), Postives = 117/257 (45.53%), Query Frame = 2
Query:   29 QDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKKPWXSS 790
            +D   RF+    A  E            F+    +  V   +DWHT +IP ++               VF IHN+ YQG + ++   +   P   +                  + M A +L +D V  VSP YA+E+ + E  G  LD ++      ++GI+NG+D+Q+W+P  DK +   + A   +  + + K+ALQ  +GL V+ +  ++  + RL +QKG D+L       +     Q +VLGTG++   SS
Sbjct:   99 EDEDWRFTFFASATTE------------FAWNVWKPQVLHCHDWHTGMIPVWMH-------QDPEVSTVFTIHNLKYQGPWRWKLDRMTWCPWYMQGD----------------HTMAAALLYADRVNAVSPTYAREICTSE-YGESLDGLLNYISGKLRGILNGIDLQDWDPANDKSLPATFSADD-LSGRAVNKQALQQRMGLEVNPDTYLLGMVSRLVDQKGVDLLLQVTERLLAYTDSQIVVLGTGERGLESS 318          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_BORBR (Glycogen synthase OS=Bordetella bronchiseptica GN=glgA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.985e-18
Identity = 69/213 (32.39%), Postives = 111/213 (52.11%), Query Frame = 2
Query:  149 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYI-GVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK--EKCQNIVLGTGK 772
            A+DWH +L P  +       G++   K +  IHN+A+QG F  E    L +P   +      DG    +   ++N++KAGI  +  V TVS  YA+E+++    G  L  ++R  G  +  + NG+D   WNP  D ++ G+++DA   M  K   K ALQAE+GL +  +  V+    RL  QK +D+  AA+P  ++  E  Q  ++G G+
Sbjct:  144 AHDWHAALAPLLIHAA----GLHY-VKTLLTIHNLAFQGTFPAELASALGIPLACRHD----DG---ALSDDRVNFLKAGIRYATRVTTVSRAYAREILTPAF-GCGLHGLLRARGADLSPVPNGIDTALWNPAADPHLGGLRFDALD-MRNKACCKAALQAELGLQLRADATVLAMGSRLTGQKMADVAIAALPALLEAHEHLQFALIGRGE 342          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA2_SYNJA (Glycogen synthase 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=glgA2 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.985e-18
Identity = 64/210 (30.48%), Postives = 108/210 (51.43%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGK 772
            +DWHT +IP ++               VF IHN+AYQG + ++   +  LP  F +                 N M AGIL +D V TVSP YA E+ +    G  L +++   G  ++GI+NG+D ++++P TD  +   +     +  + + K ALQ+ +GL V+ ++ ++  + RL EQKG D+L   +  F+     Q ++LG+G+
Sbjct:  139 HDWHTGMIPAWMHQA-------PDIGTVFTIHNLAYQGPWRWQLERMTWLPWYFSAH----------------NTMAAGILYADQVNTVSPTYAMEIRTSLH-GEGLQDLLAWKGERLRGILNGIDTEKFDPRTDPALEANFSIDD-LSGRAVNKAALQSRLGLTVNPDVFLMGMVARLVEQKGIDLLIQTLDRFLAYSDSQFVLLGSGE 323          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_SYNS9 (Glycogen synthase OS=Synechococcus sp. (strain CC9902) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.450e-17
Identity = 70/252 (27.78%), Postives = 113/252 (44.84%), Query Frame = 2
Query:   29 QDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKK 775
            +D   RF+    AA E            FS    +  V   +DWHT +IP ++               VF IHN+ YQG + ++   +   P   +                  + M A ++ +D V  VSP YAQE+ + E  G  L  ++      ++GI+NG+D++ W+P TDK +   Y A+  +  K + K+ LQ  +GL V  +  ++  + RL +QKG D+L       +     Q +VLGTG +
Sbjct:   99 EDEDWRFTFFASAAAE------------FSWNVWKPQVLHCHDWHTGMIPVWMH-------QDPEISTVFTIHNLKYQGPWRWKLDRITWCPWYMQGD----------------HTMAAALINADRVNAVSPTYAQEIRTAE-YGENLHGLLNFVSGKLRGILNGIDLEAWDPATDKALPANYSAAD-LTGKAVCKQVLQERMGLEVRDDAFLLGMVTRLVDQKGVDLLLQVADRLLSYTDSQIVVLGTGDR 313          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_SYNPW (Glycogen synthase OS=Synechococcus sp. (strain WH7803) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.450e-17
Identity = 70/252 (27.78%), Postives = 115/252 (45.63%), Query Frame = 2
Query:   29 QDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKK 775
            +D   RF+    AA E            FS    +  V   +DWHT +IP ++               VF IHN+ YQG + ++   +   P   +                  + M A +L +D V  VSP YAQE+ + E  G +L+ ++      ++GI+NG+D++ WNP TDK +   + +S  +  K   K+ LQ  +GL ++ +  ++  + RL +QKG D+L       +     Q +VLGTG +
Sbjct:   99 EDEDWRFTFFASAAAE------------FSWNVWKPQVLHCHDWHTGMIPVWMH-------QDPEISTVFTIHNLKYQGPWRWKLDRITWCPWYMQGD----------------HTMAAALLYADRVNAVSPTYAQEIRTSE-YGEKLEGLLNYISGKLRGILNGIDLEAWNPATDKALPATF-SSANLAGKATCKQVLQERMGLTLNPDTFLLGMVSRLVDQKGVDLLLQVADRLLAYTDTQIVVLGTGDR 313          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_RHIE6 (Glycogen synthase OS=Rhizobium etli (strain CIAT 652) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.450e-17
Identity = 77/255 (30.20%), Postives = 118/255 (46.27%), Query Frame = 2
Query:   14 LESDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            L  D+ DN  RF+ L  AA E    L          P  +  +   +DW  +L   Y++  Y P     S   V  IHNIA+QG+F  E F  L LP     + D ++ Y          ++K G+  +  + TVSP YA E+++ E  G+ L+ +I  R   + GIVNG+D   WNP TD  +   Y  +T+ +     +    AE     + + P+   I RL  QKG D++A      +    + +VLG+G+
Sbjct:  100 LGKDYPDNWRRFAALSLAAAEIAAGLL---------PGWQPDLVHTHDWQAALTSVYMR--YYPTPELPS---VLTIHNIAFQGQFGSEIFPGLRLPGH-AFAIDGVEYYGTT------GFLKGGLQTAHAITTVSPTYADEILTPEF-GMGLEGVIATRIDNLHGIVNGIDTDIWNPATDPVVHTHYGPTTLKNRDENRRSI--AEFFHLDNDDAPIFCVISRLTWQKGMDLVANVADEIVAMGGKLVVLGSGE 330          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_BORPA (Glycogen synthase OS=Bordetella parapertussis GN=glgA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.894e-17
Identity = 69/213 (32.39%), Postives = 109/213 (51.17%), Query Frame = 2
Query:  149 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYI-GVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK--EKCQNIVLGTGK 772
            A+DWH +L P  +       G++   K +  IHN+A+QG F  E    L +P   +      DG    +    +N++KAGI  +  V TVS  YA+E+++    G  L  ++R  G  +  + NG+D   WNP  D ++ G+++DA   M  K   K ALQAE+GL    +  V+    RL  QK +D+  AA+P  ++  E  Q  ++G G+
Sbjct:  144 AHDWHAALAPLLIHAA----GLHY-VKTLLTIHNLAFQGTFPAELASALGIPLACRHD----DG---ALSDDSVNFLKAGIRYATRVTTVSRAYAREILTPAF-GCGLHGLLRARGADLSPVPNGIDTALWNPAADPHLGGLRFDALD-MRNKACCKAALQAELGLQPRADATVLAMGSRLTGQKMADVAIAALPALLEAHEHLQFALIGRGE 342          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_RHIEC (Glycogen synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=glgA PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.474e-17
Identity = 79/255 (30.98%), Postives = 120/255 (47.06%), Query Frame = 2
Query:   14 LESDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            L  D+ DN  RF+ L  AA E    L           +  D+V   +DW  +L   Y++  Y P     S   V  IHNIA+QG+F  E F  L LP     + D ++ Y          ++K G+  +  + TVSP YA E+++ E  G+ L+ +I  R   + GIVNG+D   WNP TD  +   Y  +T+ + +   +    AE     + + P+   I RL  QKG DI+A      +    + +VLG+G+
Sbjct:  100 LGKDYPDNWRRFAALSLAASEIGAGLLPG--------WRPDLVHT-HDWQAALTSVYMR--YYPTPELPS---VLTIHNIAFQGQFGSEIFPGLRLP-DHAFAIDGVEYYGTT------GFLKGGLQTAHAITTVSPTYADEILTPEF-GMGLEGVIATRIDDLHGIVNGIDTDVWNPATDPVVHTHYGPTTLKNREENRRSI--AEFFHLDNDDAPIFCVISRLTWQKGMDIVANVADRIVAMGGKLVVLGSGE 330          
The following BLAST results are available for this feature:
BLAST of EY659732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
GLGA_RHILW3.817e-1831.37Glycogen synthase OS=Rhizobium leguminosarum bv. t... [more]
GLGA_RALSO3.817e-1828.46Glycogen synthase OS=Ralstonia solanacearum GN=glg... [more]
GLGA_PROM34.985e-1827.24Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_BORBR4.985e-1832.39Glycogen synthase OS=Bordetella bronchiseptica GN=... [more]
GLGA2_SYNJA4.985e-1830.48Glycogen synthase 2 OS=Synechococcus sp. (strain J... [more]
GLGA_SYNS91.450e-1727.78Glycogen synthase OS=Synechococcus sp. (strain CC9... [more]
GLGA_SYNPW1.450e-1727.78Glycogen synthase OS=Synechococcus sp. (strain WH7... [more]
GLGA_RHIE61.450e-1730.20Glycogen synthase OS=Rhizobium etli (strain CIAT 6... [more]
GLGA_BORPA1.894e-1732.39Glycogen synthase OS=Bordetella parapertussis GN=g... [more]
GLGA_RHIEC2.474e-1730.98Glycogen synthase OS=Rhizobium etli (strain CFN 42... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659732 ID=EY659732; Name=EY659732; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGACTGGAGAGTGACCACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGG
TGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTA
AGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGAC
AAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCC
TCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAA
ATATTCCTGTCATANGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCA
GATATTCTTGCAGCTGCCATTCCCCCATTCATCAAAGAGAAATGTCAGAA
TATAGTCCTTGGTACTGGCAAAAAACCATGGNAGAGCAGCTTTGACAGTT
GGAGATACTGTACCCTGAGAAAGCCAGAGAGTAGCGAAAATCAATATTCC
TCTGGCGCATATGATTATAGCAGAGCTGATTTTATTTTGATCCNAGCAGA
ATTGAACTTGTGGCCTCATCAAT
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