EY659732

Overview
NameEY659732
Unique NameEY659732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PROMM (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=glgA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.474e-17
Identity = 68/252 (26.98%), Postives = 116/252 (46.03%), Query Frame = 2
Query:   29 QDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKK 775
            +D   RF+    A  E            F+    +  V   +DWHT +IP ++               VF IHN+ YQG + ++   +   P   +                  + M A +L +D V  VSP YA+E+ + E  G  LD ++      ++GI+NG+D+Q+W+P  DK +   ++A   +  + + K+ALQ  +GL V+ +  ++  + RL +QKG D+L       +     Q +VLGTG++
Sbjct:   99 EDEDWRFTFFASATTE------------FAWNVWKPQVLHCHDWHTGMIPVWMH-------QDPEISTVFTIHNLKYQGPWRWKLDRMTWCPWYMQGD----------------HTMAAALLYADRVNAVSPTYAREICTSE-YGESLDGLLNYISGKLRGILNGIDLQDWDPGNDKSLPATFNADD-LSGRAVNKQALQQRMGLEVNPDTYLLGMVSRLVDQKGVDLLLQVTERLLAYTDSQIVVLGTGER 313          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_SYNSC (Glycogen synthase OS=Synechococcus sp. (strain CC9605) GN=glgA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.231e-17
Identity = 70/252 (27.78%), Postives = 113/252 (44.84%), Query Frame = 2
Query:   29 QDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKK 775
            +D   RF+    AA E            FS    +  V   +DWHT +IP ++               VF IHN+ YQG + ++   +   P   +                  + M A +L +D V  VSP YAQE+ + E  G +L+ ++      ++GI+NG+D+  W+P TD+ +   + A  +   K + K+ LQ  +GL V  +  V+  + RL +QKG D+L       +     Q +VLGTG +
Sbjct:   99 EDEDWRFTFFASAAAE------------FSWNVWKPQVLHCHDWHTGMIPVWMH-------QDPDISTVFTIHNLKYQGPWRWKLDRMTWCPWYMQGD----------------HTMAAALLYADRVNGVSPTYAQEIRTAE-YGEKLEGLLNVVSGKLRGILNGIDLDAWDPATDRSLPANFSADDLY-GKAVCKKVLQERMGLEVREDAFVLGMVSRLVDQKGVDLLLQVADRLLAYTDTQIVVLGTGDR 313          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_NOSP7 (Glycogen synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=glgA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.231e-17
Identity = 71/230 (30.87%), Postives = 110/230 (47.83%), Query Frame = 2
Query:   98 NSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVS---GEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKK 775
            N    F+  Y +  +   +DWHT +IP ++               VF IHN+AYQG + +    +   P        ++ G+N          M A +  ++ V TVSP YA+++ +   GE     L  I  K  + GI+NG+D + +NP  DKYI   +   T +D +   K ALQ EVGL V+    +I  + RL EQKG D++   +  F+     Q ++LGTG +
Sbjct:  110 NGAAEFAWNYWKPDIIHCHDWHTGMIPVWMH-------QDPDITTVFTIHNLAYQGPWRWYLEKITWCPW-------YMQGHNT---------MAAAVQFANKVNTVSPTYAEQIKTPAYGETLEGLLSFISGK--LSGIINGIDTEVYNPEDDKYIAQTFTTET-LDKRKANKIALQEEVGLEVNSKAFLIGIVTRLVEQKGIDLILQILDRFLSYTDAQFVLLGTGDR 313          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_THEEB (Glycogen synthase OS=Thermosynechococcus elongatus (strain BP-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.220e-17
Identity = 70/252 (27.78%), Postives = 119/252 (47.22%), Query Frame = 2
Query:   29 QDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKK 775
            +D   RF+     A E            F+  Y +  +   +DWHT +IP ++               VF IHN+AYQG + +    +   P        ++ G+N          M A +  +D V TVSP YA+++ + E  G +L+ ++      + GI+NG+D + ++P +D+ +   Y A T ++ +   K ALQ E+GL V+    ++  + RL EQKG D+L   +  F+     Q ++LGTG +
Sbjct:   99 EDEDWRFTFFANGAAE------------FAWNYWKPQIIHCHDWHTGMIPVWMH-------QDPDITTVFTIHNLAYQGPWRWRLEQITWCPW-------YMQGHNT---------MAAALQYADRVNTVSPTYAEQIKTPE-YGEKLEGLLSFISGKLSGILNGIDTELFDPSSDRALAQNYTADT-LERRRANKIALQEELGLEVNSGAFLVGMVSRLVEQKGLDLLIQILDRFLAYTDSQFVLLGTGDR 313          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PROMA (Glycogen synthase OS=Prochlorococcus marinus GN=glgA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.220e-17
Identity = 70/250 (28.00%), Postives = 114/250 (45.60%), Query Frame = 2
Query:   29 QDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTG 769
            +D   RF+    A  E            F+    +  V   +DWHT +IP ++               VF IHN+ YQG + ++   +   P                      + M A +L +D V  VSP Y++E+ + E  G  L+ ++      ++GI+NG+D+ EW+P TDK +   + +S  M  +   KEALQ ++GL V+ +  ++  +GRL +QKG D+L       +     Q +VLGTG
Sbjct:   99 EDEDWRFTFFASATAE------------FAWNVWKPQVLHCHDWHTGMIPVWMH-------QDPEISTVFTIHNLKYQGPWRWKLERMTWCPWYMSGD----------------HTMAAAMLFADRVNAVSPTYSREIRTSE-YGESLEGLLNYISGKLRGILNGIDLDEWDPATDKALPANF-SSGKMSTRKKNKEALQRQMGLEVNNDKYLLGMVGRLVDQKGVDLLLQVSRRLLAYTDSQIVVLGTG 311          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_DEIRA (Glycogen synthase OS=Deinococcus radiodurans GN=glgA PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.220e-17
Identity = 75/263 (28.52%), Postives = 120/263 (45.63%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAF-EDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDSW 802
            H D+  RF    +AAL A   + +  +           V   +DW   L+  + +         +  +  F +HN+ YQGR+   E  G   LP       D+  G +       +N MKAG+  +  V TVSP YAQE+ + +  +G+E  L  +  +  + GI+NG+D   WNP TD  I    D +     K    +AL+ E GL    + P++  + RL +QKG D+L  A+P  +++    +VLG G     ++   W
Sbjct:   93 HPDDVERFCAFGRAALPALDAVGVTPD-----------VLHGHDWQAGLVVAHARL--------RGLRTAFSVHNLQYQGRWNLHEAAGWTGLP-------DWTFGPDGVEFFGDLNLMKAGLNFAGHVTTVSPTYAQEITTPQYGEGLEGLLVRLTHEGRLSGILNGLDQDRWNPRTDPDIAAYSDPA----GKAGAVKALRQEFGLD---DAPILATVSRLADQKGMDLLITALPELVRD-WNVVVLGGGDPLLEAALTGW 321          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_SYNPX (Glycogen synthase OS=Synechococcus sp. (strain WH8102) GN=glgA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.512e-17
Identity = 70/252 (27.78%), Postives = 112/252 (44.44%), Query Frame = 2
Query:   29 QDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKK 775
            +D   RF+    AA E            F+    +  V   +DWHT +IP ++               VF IHN+ YQG + ++   +   P   +                  + M A +L +D V  VSP YA+E+ + E  G +LD ++      ++GI+NG+D++ WNP TD  +   + A   +  K + K  LQ  +GL V  +  V+  + RL +QKG D+L       +     Q +VLGTG +
Sbjct:   99 EDEDWRFTFFASAAAE------------FAWNVWKPNVLHCHDWHTGMIPVWMH-------QDPEISTVFTIHNLKYQGPWRWKLDRITWCPWYMQGD----------------HTMAAALLYADRVNAVSPTYAEEIRTAE-YGEKLDGLLNFVSGKLRGILNGIDLEAWNPQTDGALPATFSADD-LSGKAVCKRVLQERMGLEVRDDAFVLGMVSRLVDQKGVDLLLQVADRLLAYTDTQIVVLGTGDR 313          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA1_BRAJA (Glycogen synthase 1 OS=Bradyrhizobium japonicum GN=glgA1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.402e-17
Identity = 74/258 (28.68%), Postives = 131/258 (50.78%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKV--VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSF--DFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG----IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            D  DN +RF+    AA E   +  L+ N      +  D++  ANDW  SL+P YL         ++ AK+  +  IHN+AYQG F  +    +  P   +S+F  D ++ Y++      ++++KAG++ +  + TVS  YA+E+ + E  G  L+ ++R       + GI+NG+D + W+P +   +  ++ A   +  K    + ++ + GL V R  P+   + RL  QKG D++ +A    I    Q +V G+G+
Sbjct:   95 DWPDNDIRFARFASAAAELA-MGKLDKN------WAADLIH-ANDWQASLVPAYLA--------WRGAKLPSILTIHNLAYQGLFPKDSLRRIGAP---ESAFHIDGLEFYDQ------VSFLKAGLVYASHLTTVSGTYAREITTAEF-GCGLEGLLRLRSDAAELTGILNGID-ESWDPRSCAQLAQQFGAGDWV-GKKANADYVRKQFGLAVSRG-PMFGIVARLVHQKGIDLVLSAADEIIDAGGQIVVTGSGE 323          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA2_SYNJB (Glycogen synthase 2 OS=Synechococcus sp. GN=glgA2 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.228e-16
Identity = 64/207 (30.92%), Postives = 103/207 (49.76%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLG 763
            +DWHT +IP ++               VF IHN+AYQG + ++   +  LP  F +                 N M AGIL +D V TVSP YA E+ +    G  L +++   G  ++GI+NG+D+  ++P TD  +   +     +  +   K  LQA++GL V+ +  ++  + RL EQKG D+L  A+  F+     Q ++LG
Sbjct:  140 HDWHTGMIPAWMHQA-------PDIGTVFTIHNLAYQGPWRWQLERMTWLPWYFSAH----------------NTMAAGILYADQVNTVSPTYAMEIRTPLH-GEGLQDLLAWKGERLRGILNGIDIDRFDPRTDPDLEANFSIDD-LSGRAANKATLQAKLGLTVNPDTFLMGMVARLVEQKGIDLLIQALDRFLDYSDAQFVLLG 321          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_THET8 (Glycogen synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=glgA PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.095e-16
Identity = 89/304 (29.28%), Postives = 135/304 (44.41%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLL----NLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDSWRYCTLRKPESSENQYSSGAYDYSRADFILIXAELNLWP 916
            D  +  LRF+L   AA E  R              G D+V  A+DW  +L+  Y  T+Y              IHN+A+QG     D GL      LP       + ++ Y +      +N MK GI+ +  V TVSP YA+E+ + E  G+ LD ++R+    ++GI+NG+D + ++P  D Y+   Y        K   KEA +   GL      PV+ ++GRL+ QKG D++  A+P  ++   +  V G G      +F         + E+ E      AYD + A      AE  L P
Sbjct:   96 DDAERYLRFAL---AAKEVAR--------------GYDLVH-AHDWTAALLALYAPTVYT-------------IHNLAHQG---LVDPGLFFSWTGLPWSL-FHMEALEFYGR------VNLMKGGIVFARRVTTVSPSYAEEIQTPEF-GMGLDGVLRRHAGKLRGILNGLDTEVFDPGKDPYLPAPYTREDP-SGKARAKEAFRERTGL----RPPVLAYVGRLDYQKGLDLVLKALPRLLEMGFRLYVQGVGDGGLQEAF------LRAEEENPEGVRFLPAYDEAMARLAYAGAEAVLVP 346          
The following BLAST results are available for this feature:
BLAST of EY659732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
GLGA_PROMM2.474e-1726.98Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_SYNSC3.231e-1727.78Glycogen synthase OS=Synechococcus sp. (strain CC9... [more]
GLGA_NOSP73.231e-1730.87Glycogen synthase OS=Nostoc punctiforme (strain AT... [more]
GLGA_THEEB4.220e-1727.78Glycogen synthase OS=Thermosynechococcus elongatus... [more]
GLGA_PROMA4.220e-1728.00Glycogen synthase OS=Prochlorococcus marinus GN=gl... [more]
GLGA_DEIRA4.220e-1728.52Glycogen synthase OS=Deinococcus radiodurans GN=gl... [more]
GLGA_SYNPX5.512e-1727.78Glycogen synthase OS=Synechococcus sp. (strain WH8... [more]
GLGA1_BRAJA9.402e-1728.68Glycogen synthase 1 OS=Bradyrhizobium japonicum GN... [more]
GLGA2_SYNJB1.228e-1630.92Glycogen synthase 2 OS=Synechococcus sp. GN=glgA2 ... [more]
GLGA_THET82.095e-1629.28Glycogen synthase OS=Thermus thermophilus (strain ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659732 ID=EY659732; Name=EY659732; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGACTGGAGAGTGACCACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGG
TGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTA
AGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGAC
AAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCC
TCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAA
ATATTCCTGTCATANGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCA
GATATTCTTGCAGCTGCCATTCCCCCATTCATCAAAGAGAAATGTCAGAA
TATAGTCCTTGGTACTGGCAAAAAACCATGGNAGAGCAGCTTTGACAGTT
GGAGATACTGTACCCTGAGAAAGCCAGAGAGTAGCGAAAATCAATATTCC
TCTGGCGCATATGATTATAGCAGAGCTGATTTTATTTTGATCCNAGCAGA
ATTGAACTTGTGGCCTCATCAAT
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