EY659732

Overview
NameEY659732
Unique NameEY659732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_THET2 (Glycogen synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=glgA PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.095e-16
Identity = 89/304 (29.28%), Postives = 135/304 (44.41%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLL----NLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDSWRYCTLRKPESSENQYSSGAYDYSRADFILIXAELNLWP 916
            D  +  LRF+L   AA E  R              G D+V  A+DW  +L+  Y  T+Y              IHN+A+QG     D GL      LP       + ++ Y +      +N MK GI+ +  V TVSP YA+E+ + E  G+ LD ++R+    ++GI+NG+D + ++P  D Y+   Y        K   KEA +   GL      PV+ ++GRL+ QKG D++  A+P  ++   +  V G G      +F         + E+ E      AYD + A      AE  L P
Sbjct:   96 DDAERYLRFAL---AAKEVAR--------------GYDLVH-AHDWTAALLALYAPTVYT-------------IHNLAHQG---LVDPGLFFSWTGLPWSL-FHMEALEFYGR------VNLMKGGIVFARRVTTVSPSYAEEIQTPEF-GMGLDGVLRRHAGKLRGILNGLDTEVFDPGKDPYLPAPYTREDP-SGKARAKEAFRERTGL----RPPVLAYVGRLDYQKGLDLVLKALPRLLEMGFRLYVQGVGDGGLQEAF------LRAEEENPEGVRFLPAYDEAMARLAYAGAEAVLVP 346          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PROMT (Glycogen synthase OS=Prochlorococcus marinus (strain NATL2A) GN=glgA PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.095e-16
Identity = 62/220 (28.18%), Postives = 104/220 (47.27%), Query Frame = 2
Query:  140 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKKPWXSS 790
            V   +DWHT +IP ++               VF IHN+ YQG + ++   +   P                      + M + +L +D V  VSP Y++E+ + E  G +L+ ++      ++GI+NG+D+ EWNP TD  +  K+    +   + + K  LQ  +GL V+ +  ++  +GRL +QKG D+L       +     Q +VLGTG +   SS
Sbjct:  124 VLHCHDWHTGMIPVWMH-------QDPEISTVFTIHNLKYQGPWRWKLDQITWCPWYMHGD----------------HTMASAMLYADRVNAVSPTYSREIRTSE-YGEKLEGLLNYISGKLRGILNGVDLDEWNPATDNSLPAKFSVDNI-SGRAINKRVLQERMGLEVNPDKYLMGMVGRLVDQKGIDLLLQVANRLLSYTDSQVVVLGTGDRYLESS 318          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PROM1 (Glycogen synthase OS=Prochlorococcus marinus (strain NATL1A) GN=glgA PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.095e-16
Identity = 62/220 (28.18%), Postives = 104/220 (47.27%), Query Frame = 2
Query:  140 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKKPWXSS 790
            V   +DWHT +IP ++               VF IHN+ YQG + ++   +   P                      + M + +L +D V  VSP Y++E+ + E  G +L+ ++      ++GI+NG+D+ EWNP TD  +  K+    +   + + K  LQ  +GL V+ +  ++  +GRL +QKG D+L       +     Q +VLGTG +   SS
Sbjct:  124 VLHCHDWHTGMIPVWMH-------QDPEISTVFTIHNLKYQGPWRWKLDQITWCPWYMHGD----------------HTMASAMLYADRVNAVSPTYSREIRTSE-YGEKLEGLLNYISGKLRGILNGVDLDEWNPATDNSLPAKFSVDNI-SGRAINKRVLQERMGLEVNPDKYLMGMVGRLVDQKGIDLLLQVANRLLSYTDSQVVVLGTGDRYLESS 318          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: SSY3_SOLTU (Soluble starch synthase 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS3 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.573e-16
Identity = 71/245 (28.98%), Postives = 107/245 (43.67%), Query Frame = 2
Query:   44 RFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKP 778
            RF   C AALE              G +  D++   +DW ++ +    K  Y   G+ KS ++VF IHN+         +FG            D I        GR +         +D   TVSP Y+QE+         L          GIVNG+D   W+PL DK+I + Y +  V++ K   KEALQ ++GL    ++P++  I RL  QKG  ++  AI   ++   Q ++LG+   P
Sbjct:  883 RFGFFCHAALEF----------LLQGGFSPDIIH-CHDWSSAPVAWLFKEQYTHYGLSKS-RIVFTIHNL---------EFGA-----------DLI--------GRAMT-------NADKATTVSPTYSQEVSGNPVIAPHLHKF------HGIVNGIDPDIWDPLNDKFIPIPYTSENVVEGKTAAKEALQRKLGLK-QADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDP 1073          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_DEIGD (Glycogen synthase OS=Deinococcus geothermalis (strain DSM 11300) GN=glgA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.666e-16
Identity = 61/197 (30.96%), Postives = 95/197 (48.22%), Query Frame = 2
Query:  227 KVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVS---GEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDSWRY 808
            +  F IHN+ YQGR+   +         +  S + ++ Y        +N MKAG++ ++ V TVSP YA+E+ +   GE     L  +  +  + GI+NG+D   WNP TD  I    D +     K      L+AE GL    + P++  + RL  QKG D+L  A+P  + E+   +VLG G     ++   W Y
Sbjct:  140 RTAFTIHNLQYQGRWNLAEARTWTGLPDWTFSPEGVEFYGD------LNLMKAGLVFAEQVTTVSPTYAREITTPQYGEGLEGVLIRLALEGRLSGILNGLDQDRWNPRTDPDIRPYADPA----GKAANGSVLRAEFGLD---DAPILGVVSRLANQKGIDLLIEALPELV-ERWNVVVLGGGDPLLTAALHGWAY 322          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_DEIDV (Glycogen synthase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=glgA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.666e-16
Identity = 70/262 (26.72%), Postives = 114/262 (43.51%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVS---GEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDSW 802
            H D+  RF    +A L   R LN   +           V   +DW   L+  +              + V+ +HN+ YQGR+   +    +       + +  + Y        +N MKAG++ ++ V TVSP YA+E+ +   GE     L  +  +  + GI+NG+D + WNP TD  +    D    +  K    +AL+ E GL      PV+  + RL +QKG D+L  A+P  +      +VLG G     ++ + W
Sbjct:   92 HPDDVWRFCTYGRAVLPVLRALNEVPD-----------VLHGHDWQAGLVVAHAHEA--------GWRTVYTVHNLQYQGRWNLAEASGWSGLGPAWLTHEGAEFYGD------LNLMKAGLIAANHVTTVSPQYAREITTQQYGEGLQGVLLRLTLEGRLSGIINGLDQERWNPRTDPDVPAYSD----LAGKAAATQALRTEFGLD---KAPVLGVVSRLADQKGMDLLIEALPRLV-HNWNVVVLGGGDPLLTAALEGW 320          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_XANCP (Glycogen synthase OS=Xanthomonas campestris pv. campestris GN=glgA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.959e-16
Identity = 72/265 (27.17%), Postives = 119/265 (44.91%), Query Frame = 2
Query:   20 SDHQDNQLRFSLLCQAALEA----------PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            S+ +DN +RF+ L  AA +           PR+L+LN                  DW     PC L   Y  +    +   +  IHN+AYQG   +     L +PA+  S  +F           ++++++ GI+ +D V TVS  YAQ+ ++G  +G  LD ++     K  + GIVNG+D   W+P TD+Y+   +  +     +    +  +A  GL  +   P+   + RL  QKG D++    P  +    Q  V+G G+
Sbjct:  100 SEFEDNAIRFATLSHAAAQIAAGRAGLGWRPRLLHLN------------------DW-----PCALAAAYV-RWSGGTTPCLLTIHNLAYQGLVPYSMAAALGIPAERVSELEFYG---------QMSFLRGGIVHADHVNTVSVSYAQQ-ITGPAQGCGLDRLLAGRAAKGALSGIVNGIDA-SWDPRTDEYLDSHFSVNHWQGRQANAAQVRKA-FGLR-ESTGPLFAVVSRLVHQKGLDLICEVAPQIVAAGGQIAVIGGGE 327          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_XANC8 (Glycogen synthase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=glgA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.959e-16
Identity = 72/265 (27.17%), Postives = 119/265 (44.91%), Query Frame = 2
Query:   20 SDHQDNQLRFSLLCQAALEA----------PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            S+ +DN +RF+ L  AA +           PR+L+LN                  DW     PC L   Y  +    +   +  IHN+AYQG   +     L +PA+  S  +F           ++++++ GI+ +D V TVS  YAQ+ ++G  +G  LD ++     K  + GIVNG+D   W+P TD+Y+   +  +     +    +  +A  GL  +   P+   + RL  QKG D++    P  +    Q  V+G G+
Sbjct:  100 SEFEDNAIRFATLSHAAAQIAAGRAGLGWRPRLLHLN------------------DW-----PCALAAAYV-RWSGGTTPCLLTIHNLAYQGLVPYSMAAALGIPAERVSELEFYG---------QMSFLRGGIVHADHVNTVSVSYAQQ-ITGPAQGCGLDRLLAGRAAKGALSGIVNGIDA-SWDPRTDEYLDSHFSVNHWQGRQANAAQVRKA-FGLR-ESTGPLFAVVSRLVHQKGLDLICEVAPQIVAAGGQIAVIGGGE 327          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_RHOS4 (Glycogen synthase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=glgA PE=3 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 7.959e-16
Identity = 79/261 (30.27%), Postives = 115/261 (44.06%), Query Frame = 2
Query:    8 SGLESDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQ--FKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKP 778
            +G + D  DN  RF+ L        R       +     +  DVV  A+DW     P Y+   Y   G    A  V  +HNIA+QG         L LP Q    ++ ++  G +          +KAG++ +D + TVSP YA EL+  E  G+ L  +I  R   + GI+NG+D   W+P  ++     YDA + + AK   +  L     L V    P+   + RL  QKG D++   +P FI       VLGTG  P
Sbjct:  102 AGPDGDWGDNAQRFAALSWIGARIAR-------EGLGDGWRPDVVH-AHDWQAGFTPAYMN--YWGSG---GASSVLTVHNIAFQGWAPASLLSALRLPPQEFHPAALEYYGGLSS---------LKAGLVSADHITTVSPTYACELMRPEF-GMGLQGVIAQRAGQVTGILNGVDTDIWSPEVEER---PYDAES-LKAKAENRAVLSGAFKLSVPG--PLAILVSRLTYQKGIDLIPEVLPDFIAAGGGLAVLGTGDAP 333          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_CHLCV (Glycogen synthase OS=Chlamydophila caviae GN=glgA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.358e-15
Identity = 76/258 (29.46%), Postives = 121/258 (46.90%), Query Frame = 2
Query:   29 QDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII-RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL-------KEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKP 778
            +D+ LRFS    AA             Y       D+V + +DWH  L+   LK   +P       K +F IHN +Y+G  + +  G   +     S++     Y  P   +    +K  +  SD + TVSP YAQE+++        D I+ R+    GI+NG+D Q WNP TD  + V Y +  ++DA  +L       K AL  ++GL  + + P++  I R+ EQKG + + AAI   ++     +++GT   P
Sbjct:  102 EDDTLRFSAFSAAAAA-----------YIGELDHVDIVHM-HDWHMGLLSGLLKEPNRPH----YPKRIFTIHNFSYRGYCSTQLLGTSGISDFGLSNYQL---YRDP---QMSVLLKGALYCSDYITTVSPTYAQEILNDYSDYEMHDAIMARRHVFCGILNGIDEQIWNPETDASLAVNY-SKDLLDAPDVLFTKKEENKNALYEKLGLSYEYS-PLMCIISRIVEQKGPEFMKAAILHAMENGYALVIVGTCYDP 335          
The following BLAST results are available for this feature:
BLAST of EY659732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
GLGA_THET22.095e-1629.28Glycogen synthase OS=Thermus thermophilus (strain ... [more]
GLGA_PROMT2.095e-1628.18Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_PROM12.095e-1628.18Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
SSY3_SOLTU3.573e-1628.98Soluble starch synthase 3, chloroplastic/amyloplas... [more]
GLGA_DEIGD4.666e-1630.96Glycogen synthase OS=Deinococcus geothermalis (str... [more]
GLGA_DEIDV4.666e-1626.72Glycogen synthase OS=Deinococcus deserti (strain V... [more]
GLGA_XANCP7.959e-1627.17Glycogen synthase OS=Xanthomonas campestris pv. ca... [more]
GLGA_XANC87.959e-1627.17Glycogen synthase OS=Xanthomonas campestris pv. ca... [more]
GLGA_RHOS47.959e-1630.27Glycogen synthase OS=Rhodobacter sphaeroides (stra... [more]
GLGA_CHLCV1.358e-1529.46Glycogen synthase OS=Chlamydophila caviae GN=glgA ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659732 ID=EY659732; Name=EY659732; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGACTGGAGAGTGACCACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGG
TGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTA
AGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGAC
AAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCC
TCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAA
ATATTCCTGTCATANGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCA
GATATTCTTGCAGCTGCCATTCCCCCATTCATCAAAGAGAAATGTCAGAA
TATAGTCCTTGGTACTGGCAAAAAACCATGGNAGAGCAGCTTTGACAGTT
GGAGATACTGTACCCTGAGAAAGCCAGAGAGTAGCGAAAATCAATATTCC
TCTGGCGCATATGATTATAGCAGAGCTGATTTTATTTTGATCCNAGCAGA
ATTGAACTTGTGGCCTCATCAAT
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