EY659732

Overview
NameEY659732
Unique NameEY659732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_XANOR (Glycogen synthase OS=Xanthomonas oryzae pv. oryzae GN=glgA PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.773e-15
Identity = 71/265 (26.79%), Postives = 120/265 (45.28%), Query Frame = 2
Query:   20 SDHQDNQLRFSLLCQAALEA----------PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            S+ +DN +RF+ L  AA +           PR+L+LN                  DW     PC L   Y  +    +   +  IHN+AYQG   +   G L +PA+  +  +F           ++++++ GI+ +D V TVS  YA++ ++G  +G  LD ++     K  + GIVNG+D   W+P TD+Y+   +  +     +    +  +A  GL  +   P+   + RL  QKG D++    P  +    Q  V+G G+
Sbjct:  135 SEFEDNAIRFATLSHAAADIAAGHAGLGWKPRLLHLN------------------DW-----PCALAAGYV-RWSGGTTPCLLTIHNLAYQGLVPYSMAGALGIPAERVAELEFYG---------QMSFLRGGIVNADHVNTVSVSYAKQ-ITGPAQGCGLDRLLAGRAAKGALTGIVNGIDA-SWDPRTDEYLDSHFSVNQWQGRQDNAAQVRKA-FGLR-ESTGPLFAVVSRLVHQKGLDLICEVAPQIVAAGGQIAVIGGGE 362          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_XANOM (Glycogen synthase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=glgA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.773e-15
Identity = 71/265 (26.79%), Postives = 120/265 (45.28%), Query Frame = 2
Query:   20 SDHQDNQLRFSLLCQAALEA----------PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            S+ +DN +RF+ L  AA +           PR+L+LN                  DW     PC L   Y  +    +   +  IHN+AYQG   +   G L +PA+  +  +F           ++++++ GI+ +D V TVS  YA++ ++G  +G  LD ++     K  + GIVNG+D   W+P TD+Y+   +  +     +    +  +A  GL  +   P+   + RL  QKG D++    P  +    Q  V+G G+
Sbjct:  135 SEFEDNAIRFATLSHAAADIAAGHAGLGWKPRLLHLN------------------DW-----PCALAAGYV-RWSGGTTPCLLTIHNLAYQGLVPYSMAGALGIPAERVAELEFYG---------QMSFLRGGIVNADHVNTVSVSYAKQ-ITGPAQGCGLDRLLAGRAAKGALTGIVNGIDA-SWDPRTDEYLDSHFSVNQWQGRQDNAAQVRKA-FGLR-ESTGPLFAVVSRLVHQKGLDLICEVAPQIVAAGGQIAVIGGGE 362          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_THECA (Glycogen synthase OS=Thermus caldophilus GN=glgA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.316e-15
Identity = 87/304 (28.62%), Postives = 133/304 (43.75%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLL----NLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDSWRYCTLRKPESSENQYSSGAYDYSRADFILIXAELNLWP 916
            D  +  LRF+L   AA E  R              G D+V  A+DW  +L+  Y  T+Y              IHN+A+QG     D GL      LP       + ++ Y +      +N MK GI+ +  V TV P YA+E+ + E  G+ LD ++R+    ++GI+NG+D + ++P  D Y+   Y        K   KE  +   GL      PV+ ++GRL+ QKG D++  A+P  ++   +  V G G      +F         + E+ E      AYD + A      AE  L P
Sbjct:   97 DDAERYLRFAL---AAKEVAR--------------GYDLVH-AHDWTAALLALYAPTVYT-------------IHNLAHQG---LVDPGLFFSWTGLPWSL-FHMEALEFYGR------VNLMKGGIVFARRVTTVRPSYAEEIQTPEF-GMGLDGVLRRHAGKLRGILNGLDTEVFDPGKDPYLPAPYTREDP-SGKARAKEVFRERTGL----RPPVLAYVGRLDYQKGLDLVLKALPRLLEMGFRLYVQGVGDGGLQEAF------LRAEEENPEGVRFLPAYDEAMARLAYAGAEAVLVP 347          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PROM5 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9515) GN=glgA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.024e-15
Identity = 64/229 (27.95%), Postives = 105/229 (45.85%), Query Frame = 2
Query:   98 NSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKK 775
            +S   FS  Y +  V   +DWHT +IP ++               VF IHN+ YQG + ++   +   P                      + M A +L +D V  VSP YA E+ + E  G  LD ++      ++GI+NG+D+ EW+P  DK +  +++    ++ +   K  LQ E+GL V+    ++  + RL +QKG D++       +     Q  +LGTG K
Sbjct:  110 SSTAEFSWNYWKPQVLHCHDWHTGMIPVWMH-------QDPEISTVFTIHNLKYQGPWRWKLEKMTWCPWYMHGD----------------HTMAAAMLYADRVNAVSPTYADEIKTHE-YGESLDGLLNYISGKLRGILNGIDLNEWDPNIDKVLPAQFNIKN-LERRSENKIILQKEMGLEVNSKKYLLGMVSRLVDQKGVDLVLQVSKRLLAYTDSQIAILGTGDK 313          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_XANOP (Glycogen synthase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=glgA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.950e-15
Identity = 71/265 (26.79%), Postives = 120/265 (45.28%), Query Frame = 2
Query:   20 SDHQDNQLRFSLLCQAALEA----------PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            S+ +DN +RF+ L  AA +           PR+L+LN                  DW     PC L   Y  +    +   +  IHN+AYQG   +   G L +PA+  +  +F           ++++++ GI+ +D V TVS  YA++ ++G  +G  LD ++     K  + GIVNG+D   W+P TD+Y+   +  +     +    +  +A  GL  +   P+   + RL  QKG D++    P  +    Q  V+G G+
Sbjct:  135 SEFEDNAIRFATLSHAAADIAAGHAGLGWKPRLLHLN------------------DW-----PCALAAGYV-RWSGGTTPCLLTIHNLAYQGLVPYSMAGALGIPAERVAELEFYG---------QMSFLRGGIVNADHVNTVSVSYAKQ-ITGPAQGCGLDRLLAGRAAKGVLTGIVNGIDA-SWDPRTDEYLDSHFSVNQWQGRQDNAAQVRKA-FGLR-ESTGPLFAVVSRLVHQKGLDLICEVAPQIVAAGGQIAVIGGGE 362          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_SYNS3 (Glycogen synthase OS=Synechococcus sp. (strain CC9311) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.738e-15
Identity = 65/252 (25.79%), Postives = 112/252 (44.44%), Query Frame = 2
Query:   29 QDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKK 775
            +D   RF+    AA E            F+    +  V   +DWHT +IP ++               V+ IHN+ YQG + ++   +   P   +                  + M A +L +D V  VSP Y++E+ + E    +LD ++      ++GI+NG+D++ WNP TD+ +   + A   +  +   K+ LQ  +GL V  +  ++  + RL +QKG D+L       +     Q +VLGTG +
Sbjct:   99 EDEDWRFTFFASAAAE------------FAWNVWKPNVLHCHDWHTGMIPVWMH-------QDPEISTVYTIHNLKYQGPWRWKLDRMTWCPWYMQGD----------------HTMAAALLYADGVNAVSPTYSREIRTSE-YSEKLDGLLNYISGKLRGILNGIDLEAWNPATDRALPATFSADD-LSGRARNKQVLQERMGLEVRPDAYLLGMVSRLVDQKGVDLLLQVADRLLAYTDTQIVVLGTGDR 313          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_CHLFF (Glycogen synthase OS=Chlamydophila felis (strain Fe/C-56) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.738e-15
Identity = 73/239 (30.54%), Postives = 114/239 (47.70%), Query Frame = 2
Query:   29 QDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII-RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL-------KEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAI 721
            QD+ LRFS    AA  A  I  LN           D+V + +DWHT L+P  LK   +P   +   K +F IHN +Y+G  + +  G   +     S++         V       +K  +  SD + TVSP YAQ+++         D I+ R+   +GI+NG+D   WNP TD  +   Y    ++D+  +L       K AL  ++G+  + + P++  I R+ EQKG + + AAI
Sbjct:  102 QDDTLRFSAFSAAA--AAYIQKLNH---------VDIVHM-HDWHTGLLPGLLK---EPNRQHYP-KRIFTIHNFSYRGYCSTQLLGASGISEFGLSNYQLFRDPQVSVL------LKGALYCSDYITTVSPTYAQDILHDYSDYEMHDAIMARRHVFRGILNGIDDNIWNPETDSSLVANY-GKNLLDSPEILFTKKEENKVALYEKLGMSPEHS-PLLCIISRIVEQKGPEFMKAAI 316          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_XANC5 (Glycogen synthase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=glgA PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.800e-15
Identity = 70/265 (26.42%), Postives = 119/265 (44.91%), Query Frame = 2
Query:   20 SDHQDNQLRFSLLCQAALEA----------PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            S+ +DN +RF+ L  AA +           PR+L+LN                  DW     PC L   Y  +    +   +  IHN+AYQG   +     L +PA+  +  +F           ++++++ GI+ +D V TVS  YA++ ++G  +G  LD ++     K  + GIVNG+D   W+P TD+Y+   +  +     +    +  +A  GL  +   P+   + RL  QKG D++    P  +    Q  V+G G+
Sbjct:  135 SEFEDNAIRFATLSHAAAQIAAGHAGLGWKPRLLHLN------------------DW-----PCALAAGYV-RWSGGTTPCLLTIHNLAYQGLVPYSMAAALGIPAERVAELEFYG---------QMSFLRGGIVNADHVNTVSVSYAKQ-ITGPAQGCGLDRLLAGRAAKGALTGIVNGIDA-SWDPRTDEYLDSHFSVNQWQGRQANAAQVRKA-FGLR-ESTGPLFAVVSRLVHQKGLDLICEVAPQIVAAGGQIAVIGGGE 362          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_XANAC (Glycogen synthase OS=Xanthomonas axonopodis pv. citri GN=glgA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.800e-15
Identity = 70/265 (26.42%), Postives = 118/265 (44.53%), Query Frame = 2
Query:   20 SDHQDNQLRFSLLCQAALEA----------PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            S+ +DN +RF+ L  AA +           PR+L+LN                  DW     PC L   Y  +    +   +  IHN+AYQG   +     L +PA+  +  +F           ++++++ GI+ +D V TVS  YA++ ++G  +G  LD ++     K  + GIVNG+D   W+P TD+Y+   +  +     +    +  +A  GL      P+   + RL  QKG D++    P  +    Q  V+G G+
Sbjct:  100 SEFEDNAIRFATLSHAAAQIAAGHAGLGWKPRLLHLN------------------DW-----PCALAAGYV-RWSGGTTPCLLTIHNLAYQGLVPYSMAAALGIPAERVAELEFYG---------QMSFLRGGIVNADHVNTVSVSYAKQ-ITGPAQGCGLDRLLAGRAAKGALTGIVNGIDA-SWDPRTDQYLDSHFSVNQWQGRQANAAQVRKA-FGLRESAG-PLFAVVSRLVHQKGLDLICEVAPQIVAAGGQIAVIGGGE 327          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PROMS (Glycogen synthase OS=Prochlorococcus marinus (strain AS9601) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.800e-15
Identity = 63/224 (28.12%), Postives = 102/224 (45.54%), Query Frame = 2
Query:  113 FSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKK 775
            F+  Y +  V   +DWHT +IP ++               VF IHN+ YQG + ++   +   P                      + M A +L +D V  VSP YA E+ + E  G  L+ ++      ++GI+NG+D+ EWNP  D  +  K+     ++ +   K+ LQ E+GL V+    ++  + RL +QKG D+L       +     Q  VLGTG +
Sbjct:  115 FAWNYWKPQVLHCHDWHTGMIPVWMH-------QDPEISTVFTIHNLKYQGPWRWKLEKMTWCPWYMHGD----------------HTMAAAMLYADRVNAVSPTYADEIKTHE-YGESLEGLLNYISGKLRGILNGIDLDEWNPAKDPVLPAKFSIKN-LENRLENKKILQREMGLEVNSKKYLLGMVSRLVDQKGVDLLLQVSRRLLAYTDSQIAVLGTGDR 313          
The following BLAST results are available for this feature:
BLAST of EY659732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
GLGA_XANOR1.773e-1526.79Glycogen synthase OS=Xanthomonas oryzae pv. oryzae... [more]
GLGA_XANOM1.773e-1526.79Glycogen synthase OS=Xanthomonas oryzae pv. oryzae... [more]
GLGA_THECA2.316e-1528.62Glycogen synthase OS=Thermus caldophilus GN=glgA P... [more]
GLGA_PROM53.024e-1527.95Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_XANOP3.950e-1526.79Glycogen synthase OS=Xanthomonas oryzae pv. oryzae... [more]
GLGA_SYNS36.738e-1525.79Glycogen synthase OS=Synechococcus sp. (strain CC9... [more]
GLGA_CHLFF6.738e-1530.54Glycogen synthase OS=Chlamydophila felis (strain F... [more]
GLGA_XANC58.800e-1526.42Glycogen synthase OS=Xanthomonas campestris pv. ve... [more]
GLGA_XANAC8.800e-1526.42Glycogen synthase OS=Xanthomonas axonopodis pv. ci... [more]
GLGA_PROMS8.800e-1528.13Glycogen synthase OS=Prochlorococcus marinus (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659732 ID=EY659732; Name=EY659732; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGACTGGAGAGTGACCACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGG
TGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTA
AGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGAC
AAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCC
TCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAA
ATATTCCTGTCATANGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCA
GATATTCTTGCAGCTGCCATTCCCCCATTCATCAAAGAGAAATGTCAGAA
TATAGTCCTTGGTACTGGCAAAAAACCATGGNAGAGCAGCTTTGACAGTT
GGAGATACTGTACCCTGAGAAAGCCAGAGAGTAGCGAAAATCAATATTCC
TCTGGCGCATATGATTATAGCAGAGCTGATTTTATTTTGATCCNAGCAGA
ATTGAACTTGTGGCCTCATCAAT
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