EY659732

Overview
NameEY659732
Unique NameEY659732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig219 contig Csv1_Contig219:856..1777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_CHLT2 (Glycogen synthase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=glgA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.167e-13
Identity = 63/221 (28.51%), Postives = 103/221 (46.61%), Query Frame = 2
Query:  128 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKY------DASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGT 766
            G ++V + +DWHT L+   LK     +   +  K+V  +HN  Y+G    E     +L   + S +         V       +K  +  SD V TVSP YA+E++  +    E+ + I  R+  ++GI+NG+D   W P TD  +   Y        S   +AK   K+AL   +GL ++ + P +  I R+ EQKG   +  AI   ++     I++GT
Sbjct:  125 GANIVHL-HDWHTGLVAGLLKQ----QPCSQLQKIVLTLHNFGYRGYTTREILEASSLNEFYISQYQLFRDPQTCVL------LKGALYCSDFVTTVSPTYAKEILE-DYSDYEIHDAITARQHHLRGILNGIDTTIWGPETDPNLAKNYTKELFETPSIFFEAKAENKKALYERLGLSLEHS-PCVCIISRIAEQKGPHFMKQAILHALENAYTLIIIGT 332          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PSEA7 (Glycogen synthase OS=Pseudomonas aeruginosa (strain PA7) GN=glgA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.831e-13
Identity = 75/261 (28.74%), Postives = 119/261 (45.59%), Query Frame = 2
Query:   20 SDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYG----EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKS--SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR----KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            +D  DN LRF+ LC AA E             +G +G    +  +  ANDW ++L P Y+       G+   +  +F IHN+AYQG    +    L LP +  S  S +F         GR ++++KAGI  +  + TVS  YAQE+ + E  G  L  I++    K  + GIVNG+D   W P  D ++   + A      K      ++   GL   +  P+   + RL +QKG D+        ++   + + +G G+
Sbjct:  135 NDWADNHLRFARLCLAAAE------------IAGGHGAQGWQPGLVHANDWPSALTPAYMAW----NGVRTPS--LFTIHNLAYQGLCDLQCSAELGLPDEALSPESMEF--------HGR-LSFLKAGIAHAHHITTVSETYAQEITTPE-YGCGLHGILKCKVEKRQLSGIVNGID-DSWQPHCDPHLVAGFSARQ-WAGKRANTRYVEERFGLEPGKG-PLFAVVSRLVQQKGIDLTLEISDALLQAGGRLVSIGRGE 364          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTA (Glycogen synthase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=glgA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.697e-13
Identity = 63/221 (28.51%), Postives = 103/221 (46.61%), Query Frame = 2
Query:  128 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKY------DASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGT 766
            G ++V + +DWHT L+   LK     +   +  K+V  +HN  Y+G    E     +L   + S +         V       +K  +  SD V TVSP YA+E++  +    E+ + I  R+  ++GI+NG+D   W P TD  +   Y        S   +AK   K+AL   +GL ++ + P +  I R+ EQKG   +  AI   ++     I++GT
Sbjct:  125 GANIVHL-HDWHTGLVAGLLKQ----QPCSQLQKIVLTLHNFGYRGYTTREILEASSLNEFYISQYQLFRDPQTCVL------LKGALYCSDFVTTVSPTYAKEILE-DYSDYEIHDAITARQHHLRGILNGIDTTIWGPETDPNLAKNYTKELFETPSIFFEAKAKNKKALYEILGLSLEHS-PCVCIISRIAEQKGPHFMKQAILHALENAYTLIIIGT 332          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PSEAE (Glycogen synthase OS=Pseudomonas aeruginosa GN=glgA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.076e-12
Identity = 76/258 (29.46%), Postives = 116/258 (44.96%), Query Frame = 2
Query:   20 SDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFV-ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKS--SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR----KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            +D  DN LRF+ LC AA E              G  G     V ANDW ++L P Y+       G+   +  +F IHN+AYQG    +    L LP +  S  S +F         GR ++++KAGI  +  + TVS  YAQE+ + E  G  L  I++    K  + GIVNG+D   W P  D ++   + A      K      ++   GL   +  P+   + RL +QKG D+        ++   + + +G G+
Sbjct:  135 NDWPDNHLRFARLCLAAAEIAG---------GRGAQGWQPGLVHANDWPSALTPAYMAW----NGVRTPS--LFTIHNLAYQGLCDLQCSAELGLPDEALSHESMEF--------HGR-LSFLKAGIAHAHHITTVSETYAQEITTPE-YGCGLHGILKYKVEKRQLSGIVNGID-DSWQPHCDPHLVACFSARQ-WAGKRANTRYVEERFGLEPGKG-PLFAVVSRLVQQKGIDLTLEISDALLQAGGRLVSIGRGE 364          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PSEPK (Glycogen synthase OS=Pseudomonas putida (strain KT2440) GN=glgA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.460e-11
Identity = 69/256 (26.95%), Postives = 115/256 (44.92%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP--AQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG----IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            D  DN +RF+ L  AA E    +     K    P     V  A+DW   L P Y+      +G+  +   +F IHN+AYQG ++      L +P  A  +   +F           K++++KAG+  S  + TVS  YA+E+ + E  G  LD  +        + GI NG+D + W+  TDK++   +  +   + K    + ++   GL  D   P+   + RL  QKG D+        +++  Q  ++G G+
Sbjct:  146 DWPDNHIRFARLGLAAAE----IAAGEGKIHWTPE----VVHAHDWPAGLAPAYMHW----RGL--NTPTLFTIHNLAYQGVYSRGCSPELAIPEHAMQQEGMEFYG---------KLSFLKAGLAYSSHITTVSATYAREITTPE-FGCGLDGFLASKAQQGLLGGIPNGID-ESWDSATDKHLQHNFSIND-WEGKARNTQEVRELFGLD-DSEGPLFAVVSRLVYQKGLDLTLGVADYIVEQGGQIAIIGRGE 374          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PSEPF (Glycogen synthase OS=Pseudomonas fluorescens (strain Pf0-1) GN=glgA PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11
Identity = 70/255 (27.45%), Postives = 119/255 (46.67%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALE-APRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            D  DN +RF+ L  AA + A  +  ++        +  D+V  A+DW   L P Y+      +G  +    +F IHN+AYQG  +      L +PA      + ++ Y K      ++++KAG+  S  + TVS  YAQE+ +  D G  LD  +    ++  + GI NG+D + W+  TD ++   + A    + K +    ++   GL  D   P+   + RL  QKG D+  A     ++   Q  ++G G+
Sbjct:  112 DWPDNHIRFARLGLAAADIAANLAQIH--------WCPDLVH-AHDWPAGLAPAYMHW----RG--QRTPTLFTIHNLAYQGVTSLGSCPELGIPAHALQQ-EGMEFYGK------MSFLKAGMAYSSHITTVSATYAQEITT-PDFGCGLDGFLAAKTQQGLLSGIPNGID-ESWDAATDPHLFAPF-AIGDWEGKAINAAHVRELFGLK-DSEGPLFAVVSRLVYQKGLDLTEAVSEYIVQNGGQIAIIGRGE 340          
The following BLAST results are available for this feature:
BLAST of EY659732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
GLGA_CHLT22.167e-1328.51Glycogen synthase OS=Chlamydia trachomatis (strain... [more]
GLGA_PSEA72.831e-1328.74Glycogen synthase OS=Pseudomonas aeruginosa (strai... [more]
GLGA_CHLTA3.697e-1328.51Glycogen synthase OS=Chlamydia trachomatis (strain... [more]
GLGA_PSEAE1.076e-1229.46Glycogen synthase OS=Pseudomonas aeruginosa GN=glg... [more]
GLGA_PSEPK3.460e-1126.95Glycogen synthase OS=Pseudomonas putida (strain KT... [more]
GLGA_PSEPF7.709e-1127.45Glycogen synthase OS=Pseudomonas fluorescens (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659732 ID=EY659732; Name=EY659732; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGACTGGAGAGTGACCACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGG
TGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTA
AGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGAC
AAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCC
TCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAA
ATATTCCTGTCATANGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCA
GATATTCTTGCAGCTGCCATTCCCCCATTCATCAAAGAGAAATGTCAGAA
TATAGTCCTTGGTACTGGCAAAAAACCATGGNAGAGCAGCTTTGACAGTT
GGAGATACTGTACCCTGAGAAAGCCAGAGAGTAGCGAAAATCAATATTCC
TCTGGCGCATATGATTATAGCAGAGCTGATTTTATTTTGATCCNAGCAGA
ATTGAACTTGTGGCCTCATCAAT
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