EY659732

Overview
NameEY659732
Unique NameEY659732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig219 contig Csv1_Contig219:856..1777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_EUBE2 (Glycogen synthase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=glgA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.198e-29
Identity = 88/266 (33.08%), Postives = 137/266 (51.50%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFD--SWRY 808
            H+D + +F+   +AAL A  +L    +           +   NDW T LIP YLK  +     Y+  K +  IHN+ +QG +  +    +  LP ++ +S D ++ Y+        N++K GI+ +D V TVS  YA+E+ +    G  LD ++R     + GIVNG+D  E+NP TDK I   Y+  T    K   K ALQ E+GL  D+   +I  + RL +QKG D++A  +     E  Q +VLGTG++ + + F    W+Y
Sbjct:  104 HEDIE-KFAFFSKAALSALPVLGFRPD-----------IIHCNDWQTGLIPVYLKERFSQGEFYQGIKSIMTIHNLKFQGIWDLKKVKDITGLPDEYFTS-DKLEAYDDA------NYLKGGIVYADRVTTVSETYAEEIKT-PFYGENLDGLMRARSNVLSGIVNGIDYDEYNPETDKRIPNNYNQVTFRKEKWKNKVALQKELGLTEDKGKFMIGLVSRLTDQKGLDLVAYVMDQLCAEDVQFVVLGTGEERYENMFRHYDWKY 349          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA1_METCA (Glycogen synthase 1 OS=Methylococcus capsulatus GN=glgA1 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.198e-29
Identity = 88/257 (34.24%), Postives = 139/257 (54.09%), Query Frame = 2
Query:   32 DNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFD 796
            DN  RF+LL + A++      L  ++   G +  DVV   NDW T LIP  L    +P        VVF +HN+AYQG F +E F  L LP +     + ++ Y +      ++++K G++ +D + TVSP YA+E+ + E  G  LD ++R  K+ + GI+NG+D   WNP TD Y+   Y   T ++ K + +  L+   GLP D  + V+  +GR+ EQKG D+L   +   ++   Q +VLG+G K +   F+
Sbjct:  106 DNAERFALLARVAVD------LTQDRLGLG-WKPDVVH-CNDWQTGLIPPLLSD--EPN----RPAVVFTVHNLAYQGLFPYETFQRLALPPRLWK-MEALEFYGQ------LSFIKGGLVFADRINTVSPSYAEEIQTPEF-GCGLDGLLRSRKSCLSGILNGIDDVAWNPATDPYLPAPYGPDT-LERKKVNRTVLRQRYGLPDDPEVAVLGMVGRMVEQKGVDLLIDILDDLLQLPVQLVVLGSGDKEFERCFE 339          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_AERHH (Glycogen synthase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=glgA PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.071e-28
Identity = 80/249 (32.13%), Postives = 127/249 (51.00%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSG-EDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + DN  RF+ L  AAL A   L           +  D+V   NDWHT L+P  LKT +     ++  + V  IHN A+QG F  + F  +   A ++    +  G+        +N +K G+L +D +  VSP+YA EL++     G+      R   ++GI+NG D Q+W+P  D ++   YD    +  K + K++LQ E GLPV  ++P+   + RL EQKG  +L   +  F+  K Q +++G+G
Sbjct:  111 YPDNGERFAFLAAAALHASEQL----------AFAPDIVH-CNDWHTGLLPLLLKTRHAHNPFFQHTRSVISIHNAAFQGVFERQQFWAVPEIADYEQRISYDYGH--------VNLLKCGVLYADKINAVSPNYASELLTHLGAHGMASIFQQRAADLRGILNGCDYQDWDPAFDDFLPATYDVDN-LAGKHICKQSLQQETGLPV-VDLPIYGMVCRLTEQKGVHLLLPVLDKFLHHKVQVVIVGSG 338          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_CLOBB (Glycogen synthase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=glgA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.398e-28
Identity = 92/260 (35.38%), Postives = 133/260 (51.15%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM-YKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR-GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            H D+  RF+   +A L+  + L+   N           V   NDW T +IP  LK  Y  K M Y   K VF IHNIA+QG F       + LP  F   +D+    N  ++    + +MK  I  SDM+ TVS  YA+E+ + E  G  LD ++R+    ++GI+NG+D  E+NP  D  I   YD + + D K   K  LQ+E+GL V+ NIP+I  + RL  QKG D+L       ++   Q +++GTG K +   F
Sbjct:  101 HYDDAERFAFFDRAVLDMIKQLDWKPN-----------VIHCNDWQTGMIPVLLKLEYMRKDMFYWDIKSVFSIHNIAFQGVF-----DPVILPELF--GYDYEQYTNTNLKFDDGVGFMKGAINYSDMITTVSYSYAEEIKTPEF-GERLDWLLREKSYMLRGILNGIDYDEFNPKNDSLINKNYDVNNIND-KYENKRNLQSELGLSVNENIPMIAMVTRLTSQKGLDLLVHISERLLQNDIQLVIVGTGDKHYEDHF 340          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_CLOBA (Glycogen synthase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=glgA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.398e-28
Identity = 91/260 (35.00%), Postives = 133/260 (51.15%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM-YKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR-GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            H D+  RF+   +A L+  + L+   N           +   NDW T +IP  LK  Y  K M Y   K VF IHNIA+QG F       + LP  F   +D+    N  ++    + +MK  I  SDM+ TVS  YA+E+ + E  G  LD ++R+    ++GI+NG+D  E+NP  D  I   YD + + D K   K  LQ+E+GL V+ NIP+I  + RL  QKG D+L       ++   Q +++GTG K +   F
Sbjct:  101 HYDDAERFAFFDRAVLDMIKQLDWKPN-----------IIHCNDWQTGMIPVLLKLEYMRKDMFYWDIKSVFSIHNIAFQGVF-----DPVILPELF--GYDYEQYTNTNLKFDDGVGFMKGAINYSDMITTVSYSYAEEIKTPEF-GERLDWLLREKSYMLRGILNGIDYDEFNPKNDNLINKNYDVNNIND-KYENKRNLQSELGLNVNENIPIIAMVTRLTSQKGLDLLVNISERLLQNDIQLVIVGTGDKHYEDHF 340          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_YERPB (Glycogen synthase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=glgA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.826e-28
Identity = 87/259 (33.59%), Postives = 134/259 (51.74%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            + DN LRF+LL   A E    L+          Y    V  A+DWH  L   YL    +P      A+ VF +HN+AYQG F+ +    L+LPA+F   +  ++ Y +      I+++KAG+  +D V TVSP YA+E+       G+E  L  ++R+  + GI+NG+D   W+P +D  +  +YDA   + AK + K  LQ  +GL +  N P+   + RL  QKG D++  A+P  +    Q +VLG+G      +F
Sbjct:  103 YSDNYLRFALLGWMACELACGLD---------GYWRPEVVHAHDWHAGLTCAYLAARGRP------ARSVFTVHNLAYQGLFSADHLSELHLPAEFFQIYG-LEFYGQ------ISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALVRQGRLTGILNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLAENKPIFAVVSRLTVQKGLDLVLEALPELLALGGQLVVLGSGDATLQEAF 338          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_STRE4 (Glycogen synthase OS=Streptococcus equi subsp. equi (strain 4047) GN=glgA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.826e-28
Identity = 81/228 (35.53%), Postives = 126/228 (55.26%), Query Frame = 2
Query:  134 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF-IDGYNK-PVRGRK-INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDSW 802
            D++ V +D+HT++IP  LK  Y     Y++ + VF IHNIA+QG+F          P      FD  I+ Y    +R    +NWMKA +L +D V TVSP YA E+ +    G  LD ++R     + GIVNG+D   +NP  D ++   + A   +  K   K+ALQ  +GLPV  ++P+I  + RL +QKG  ++   +P  +++  Q ++LGTG   + ++F SW
Sbjct:  127 DILHV-HDYHTAMIPFLLKEKYHWIQAYQAIRTVFTIHNIAFQGQFD---------PGMLGDLFDVGIERYEDGTLRWHDCLNWMKAAVLYADRVTTVSPSYAHEIQTPAF-GQGLDQVMRMEAGKLSGIVNGIDTDLFNPARDPHLPASFSAED-LSGKAATKQALQERLGLPVRADVPLIGMVSRLTDQKGFQLVLEELPHILQQDVQLVLLGTGDPDYEAAF-SW 341          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_DESVM (Glycogen synthase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=glgA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.826e-28
Identity = 92/258 (35.66%), Postives = 126/258 (48.84%), Query Frame = 2
Query:   17 ESDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQ--FKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI--IRKTGIKGIVNGMDVQEWNPLTDKYIGVKY--DASTVMDAKPLLKEALQAEVGL-PVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + D+ DN  RF   C+AA+   R L                V  ANDW + L+P YL    +    +   + V  IHN+A+QGRFA   F    LP Q    S  +F   +         N +KAGI  +DMV TVSP YA+E++ G   G  L+ I  +R+  + GI+NG D   WNP  DK++  +Y  D       K   K AL  E+GL P   + PV+ FIGRL  QKG D+L   +P  ++     I+LG G
Sbjct:  105 KGDYFDNCERFIFFCRAAMALLRRLGT-----------PPAVLHANDWQSGLVPAYLHFWRQTDPFWADTRSVMTIHNLAFQGRFASRLFTGCGLPPQAWTMSGVEFWGDF---------NLLKAGIAYADMVTTVSPSYAREIL-GPAYGCGLEGILQVRQHALHGILNGADYGIWNPAQDKFLPCRYGPDDPQGFAGKQRCKAALLDELGLAPELAHRPVLGFIGRLRGQKGIDLLLDIVPRLMERNVGVIILGEG 341          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_ALKMQ (Glycogen synthase OS=Alkaliphilus metalliredigens (strain QYMF) GN=glgA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.826e-28
Identity = 87/270 (32.22%), Postives = 135/270 (50.00%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDSWRYCTLRKPE 829
            H D+  RF+   ++ LE    ++   +           +   +DW T++I   LKT Y+  G YK+ K VF IHN+ YQG F  E  G L     F  S    +       G  +N+MK G+  SD + TVSP YAQE +     G  L+ ++  +K  ++G+ NG+D   +NP TD ++   + +  + + K   K  LQ  + L VD  IP+I  + RL EQKG D++A  +   ++E+ Q +VLGTG   +   F   R   ++ PE
Sbjct:  101 HNDDGERFAFFSRSVLEILPHIDCKPD-----------IIHCHDWQTAMISYLLKTQYQHHGFYKNIKTVFTIHNLKYQGVFPQEVLGDL-----FNGSQQHFNEGGVEYHG-NVNYMKGGLNFSDYITTVSPTYAQE-IQDPFFGEGLEGVLSRKKKQLQGVTNGIDDSVYNPQTDIHLFKNFSSENLRNKKD-NKLGLQERLNLAVDAKIPMIGMVTRLVEQKGLDLVANQLEKLMEEEIQLVVLGTGDHQYEEIF---RQAAIKYPE 348          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_AZOSE (Glycogen synthase OS=Azoarcus sp. (strain EbN1) GN=glgA PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.385e-28
Identity = 86/271 (31.73%), Postives = 140/271 (51.66%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSFDSWRYCTLRKPE 829
            D+ DN LRF LL   A    R+ +  S   +        +   NDW T+L P YLK      G+  +A  +  +HN+A+QG F  +    L LP +   S + ++ + K      ++++KAG+  +D ++ VSP YA+E+ + E  G  +  ++  R   + GI+NG+D+  WNP TD ++   YDA T+ D  P  K ALQAE+GL  D +  ++  + RL +QKG D++  A+P  +    Q  +LG G   +     +WR     +P+
Sbjct:  114 DYTDNALRFGLLSHVAA---RLASAASPLVWRAD-----ILHCNDWPTALAPAYLKL-----GLPGAAPSLIVVHNLAFQGIFPLDVAERLGLPPESLKS-EGVEYWGK------LSFLKAGLYYADRIVAVSPTYAREIRT-EAHGCGMQGLLETRANRLAGILNGIDMDAWNPRTDPHLDTNYDADTLEDKAP-NKRALQAELGLAADDDALLLGMVTRLTDQKGIDLVLDALPELLARPVQLALLGGGDARFE---QAWRQRAAARPD 359          
The following BLAST results are available for this feature:
BLAST of EY659732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
GLGA_EUBE28.198e-2933.08Glycogen synthase OS=Eubacterium eligens (strain A... [more]
GLGA1_METCA8.198e-2934.24Glycogen synthase 1 OS=Methylococcus capsulatus GN... [more]
GLGA_AERHH1.071e-2832.13Glycogen synthase OS=Aeromonas hydrophila subsp. h... [more]
GLGA_CLOBB1.398e-2835.38Glycogen synthase OS=Clostridium botulinum (strain... [more]
GLGA_CLOBA1.398e-2835.00Glycogen synthase OS=Clostridium botulinum (strain... [more]
GLGA_YERPB1.826e-2833.59Glycogen synthase OS=Yersinia pseudotuberculosis s... [more]
GLGA_STRE41.826e-2835.53Glycogen synthase OS=Streptococcus equi subsp. equ... [more]
GLGA_DESVM1.826e-2835.66Glycogen synthase OS=Desulfovibrio vulgaris (strai... [more]
GLGA_ALKMQ1.826e-2832.22Glycogen synthase OS=Alkaliphilus metalliredigens ... [more]
GLGA_AZOSE2.385e-2831.73Glycogen synthase OS=Azoarcus sp. (strain EbN1) GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659732 ID=EY659732; Name=EY659732; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGACTGGAGAGTGACCACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGG
TGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTA
AGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGAC
AAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCC
TCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAA
ATATTCCTGTCATANGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCA
GATATTCTTGCAGCTGCCATTCCCCCATTCATCAAAGAGAAATGTCAGAA
TATAGTCCTTGGTACTGGCAAAAAACCATGGNAGAGCAGCTTTGACAGTT
GGAGATACTGTACCCTGAGAAAGCCAGAGAGTAGCGAAAATCAATATTCC
TCTGGCGCATATGATTATAGCAGAGCTGATTTTATTTTGATCCNAGCAGA
ATTGAACTTGTGGCCTCATCAAT
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