EY659723
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.212e-18 Identity = 60/158 (37.97%), Postives = 81/158 (51.27%), Query Frame = 3 Query: 330 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI-NLVFAVIAEIVLVXGAEYYRITNGLDFGDKLHPGGPFDPLGLAXGS*QFALLKXKEIRMGDLPWFACLG 800 P +L G PGD+G+DP GL+ P++F +++ E+ H RWAML G ++PEA N W A L DG Y G +P NL + E + + AE R T D K +PGG FDPLG + +F LK KEI+ G L A +G Sbjct: 55 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGL--GNWVKAQEW----AALPDGQA-TYLGNPVPWGNLPTILAIEFLAIAFAEQQR-TMEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVG 204
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18 Identity = 74/215 (34.42%), Postives = 96/215 (44.65%), Query Frame = 3 Query: 279 PDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVXGAEYYR----------------ITNGLDFGDKLHPGGP-FDPLGLAXGS-*QFALLKXKEIRMGDLPWFACLGS-FSRLCHSEGQV-RTC*HLSDP 863 PDR ++ P S P +L G +PGD+G+DP GL+ P+ Q EL+H RWAMLGAAG IPE K G P W+ G +T F I E+VL+ AE R N L D +PGG FDPLG GS + L+ KEI+ G L A +G+ F + G + HL+DP Sbjct: 63 PDRPLWFPG-----STPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPS--WYTAGEQEYFTDTTTLF------------IVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.098e-17 Identity = 73/215 (33.95%), Postives = 96/215 (44.65%), Query Frame = 3 Query: 279 PDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVXGAEYYR----------------ITNGLDFGDKLHPGGP-FDPLGLAXGS-*QFALLKXKEIRMGDLPWFACLGS-FSRLCHSEGQV-RTC*HLSDP 863 PDR ++ P S PE+L G +PGD+G+DP GL P+ EL+H+RWAMLGAAG IPE K G P W+ G +T F + E+VL+ AE R N L D +PGG FDPLG GS + L+ KEI+ G L A +G+ F + G + HL+DP Sbjct: 63 PDRPLWFPG-----STPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS--WYTAGEQEYFTDTTTLF------------VIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.612e-16 Identity = 68/182 (37.36%), Postives = 89/182 (48.90%), Query Frame = 3 Query: 336 YLTGEVPGDYGYDPFGLSKKPDDFS----KYQAY-ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVXGAEYYRITN-------------GLD-----FGDKLHPGGP-FDPLGLAXGS*QFALLKXKEIRMGDLPWFACLGSF 806 YL G +PGD+G+DP GLS K+ AY E+I+ R+AMLGAAG I PE K G A+ WF+TG + G T NY+ N + + E+ L+ AE+ R + GL+ GD +PGGP F+PLG LK KEI+ G L A LG F Sbjct: 65 YLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAG-TYNYWADNYTL-----FVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.099e-15 Identity = 66/183 (36.07%), Postives = 90/183 (49.18%), Query Frame = 3 Query: 336 YLTGEVPGDYGYDPFGLSKKPDDFS-----KYQAY-ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVXGAEYYRITN-------------GLD-----FGDKLHPGGP-FDPLGLAXGS*QFALLKXKEIRMGDLPWFACLGSF 806 YL G +PGDYG+DP GLS P+ ++ AY E+I+ R+AMLGA G I PE K G A+ WF+TG + G T NY+ N + + E+ L+ AE+ R + GL+ G+ +PGGP F+PLG LK KE++ G L A LG F Sbjct: 67 YLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAG-TYNYWADNYTL-----FVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYF 242
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.317e-14 Identity = 54/170 (31.76%), Postives = 79/170 (46.47%), Query Frame = 3 Query: 330 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVXGAEYYRITN-------------GLDFGDKLHPGGPFDPLGLAXGS*QFALLKXKEIRMGDLPWFACLG 800 P+YLTG + GD G+DP GL++ P++ + EL++ RWAMLG AG ++PE F K G PE W+ D YF + + ++ ++ V + + I N L G+ +PGG F+PL A K KE+ G L A LG Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPE--WY-------DAGKEQYFASSSTLFVIEFILFHYVEI--RRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTQ----EAKEKELANGRLAMLAFLG 218
BLAST of EY659723 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.363e-14 Identity = 54/170 (31.76%), Postives = 79/170 (46.47%), Query Frame = 3 Query: 330 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVXGAEYYRITN-------------GLDFGDKLHPGGPFDPLGLAXGS*QFALLKXKEIRMGDLPWFACLG 800 P YLTG +PGD G+DP GL++ P++ + EL++ RWAMLG AG ++PE F G P+ W+ G YF + + ++ +++ V + + I N L G+ +PGG F+PL A K KEI G L A LG Sbjct: 63 PGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPK--WYAAG-------KEEYFASSSTLFVIEFILSHYVEI--RRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFA----PTLEAKEKEIANGRLAMLAFLG 217 The following BLAST results are available for this feature:
BLAST of EY659723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659723 ID=EY659723; Name=EY659723; organism=Citrus sinensis; type=EST; length=912bpback to top |