EY659711

Overview
NameEY659711
Unique NameEY659711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_SULIK (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 4.177e-49
Identity = 108/246 (43.90%), Postives = 150/246 (60.98%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTGR 749
            MG+ +  QR G GS  F+S +  R G  ++ ++      G+L G V +I+H+PG  AP+A +   +  +++ Q     A +G+   Q +  GK + +  GNV+ +   PEG +VCNVE + GD G  AR++G YAV++  +   D   +KLPS   K + +  RA +G VAGGG  EKPLLKAG  Y K++VK   WP VRGVAMN V+HPHGGG HQ +   ST  R+APP +KVG IAA RTGR
Sbjct:    1 MGKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKS--GDKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIAARRTGR 234          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_SULIA (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.16.27) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 4.177e-49
Identity = 108/246 (43.90%), Postives = 150/246 (60.98%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTGR 749
            MG+ +  QR G GS  F+S +  R G  ++ ++      G+L G V +I+H+PG  AP+A +   +  +++ Q     A +G+   Q +  GK + +  GNV+ +   PEG +VCNVE + GD G  AR++G YAV++  +   D   +KLPS   K + +  RA +G VAGGG  EKPLLKAG  Y K++VK   WP VRGVAMN V+HPHGGG HQ +   ST  R+APP +KVG IAA RTGR
Sbjct:    1 MGKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKS--GDKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIAARRTGR 234          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_METBF (50S ribosomal protein L2P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 4.177e-49
Identity = 101/245 (41.22%), Postives = 151/245 (61.63%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTG 746
            MG+ I +Q +G G+  +++ +H  K   +   +D    N  ++G V  + HDP R AP+A+V F        ++ L +A+EG+  G  + CG  A +  GN++P+  +PEG  +CN+E    D G   R+SG YA +++H  +++ T V +PSG  K +   CRA++G VAGGGR ++P LKAG  YHK + +   +P+V GVAMNPV+HP GGG  +H G  +T  R+APP +KVGLIAA RTG
Sbjct:    1 MGKRIISQNRGRGTPTYRAPSHKYKAELRHPRVD---ENTSIQGKVINLEHDPARSAPIAKVVFE-----TGEERLLLASEGIAVGSTIECGDDADVRPGNIVPIGKVPEGFFICNIESKPNDGGRFVRSSGVYATVVTH--ESNRTAVAMPSGNIKWLNPKCRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSGVAMNPVDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLIAARRTG 235          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_PYRAE (50S ribosomal protein L2P OS=Pyrobaculum aerophilum GN=rpl2p PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.455e-49
Identity = 111/246 (45.12%), Postives = 147/246 (59.76%), Query Frame = 3
Query:   15 MGRVIRAQRKG-AGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTGR 749
            MG+ I  QR+G  GS F+S +  R GP ++  L  G  +G  KG V +I+H+PG  AP+A++   +   +        AAEG+Y GQ V  GK A+   GN++ +  IPEG ++ NVE   GD G  ARA G YAV+I   P+ + T ++LPSG    + S  RA +G VAGGGR EKP LKAG  YH+ R K   +P VRG AM+P  HPHGGG+HQ  G  +   + APP QKVG I +  TGR
Sbjct:    1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPL--GVISG--KGYVVDILHEPGLNAPVAKIVTENGVEFFNY-----AAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKRAGDGGKFARAGGTYAVVIGQKPEENKTIIRLPSGRTVEVDSRGRATVGIVAGGGRIEKPFLKAGKKYHRARAKAWKYPTVRGKAMSPYAHPHGGGSHQKGG--TPVPKTAPPGQKVGFIGSRCTGR 235          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_PYRCJ (50S ribosomal protein L2P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 7.125e-49
Identity = 110/246 (44.72%), Postives = 145/246 (58.94%), Query Frame = 3
Query:   15 MGRVIRAQRKG-AGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTGR 749
            MG+ I  QR+G  GS F+S +  R GP ++     G      +G+V EI+H+PG  AP+A++   +   +        AAEG+Y GQ +  G  A   VGNVLP+  IPEG +V NVE   GD G  AR+ G YA++I   P+ + T V+LPSG    + +  RA IG VAGGGR EKP +KAG  YH+ R K   +P VRG AM+P  HPHGGG+HQ  G  +   + APP QKVG I +  TGR
Sbjct:    1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPNISG------RGIVVEILHEPGLNAPVAKIRMENGVEFFNY-----AAEGLYVGQVIQVGPDAPPAVGNVLPLGKIPEGTMVFNVEKRFGDGGKFARSGGTYALVIGQRPEENKTIVRLPSGRVIEVDARGRATIGIVAGGGRVEKPFVKAGKKYHRARAKSWKYPTVRGKAMSPYAHPHGGGSHQKGG--TPVPKTAPPGQKVGFIGSRCTGR 233          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_METMA (50S ribosomal protein L2P OS=Methanosarcina mazei GN=rpl2p PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 9.305e-49
Identity = 103/246 (41.87%), Postives = 151/246 (61.38%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFI-AAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTG 746
            MG+ + +Q +G G+  +++ +H  K   +   +D    N  L+G V +I HDP R AP+A+V F +       +ELF+ A+EG+  G  + CG  A +  GN++P+ ++PEG  +CN+E    D G   R+SG YA +++H P    T V +PSG  K +   CRA++G VAGGGR ++P LKAG  YHK + +   +P+V  VAMNP +HP GGG  +H G  +T  R+APP +KVGLIAA RTG
Sbjct:    1 MGKRLISQNRGRGTPTYRAPSHKYKADLRHPRVD---ENTSLQGEVIDIEHDPARSAPIAKVAFENG------EELFLLASEGVAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNIESKPNDGGKFVRSSGVYATVVTHEPTR--TAVSMPSGNIKWLNPKCRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLIAARRTG 235          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_SULIN (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.215e-48
Identity = 107/246 (43.50%), Postives = 149/246 (60.57%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTGR 749
            MG+ +  QR G GS  F+S +  R G  ++ ++      G+L G V +I+H+PG   P+A +   +  +++ Q     A +G+   Q +  GK + +  GNV+ +   PEG +VCNVE + GD G  AR++G YAV++  +   D   +KLPS   K + +  RA +G VAGGG  EKPLLKAG  Y K++VK   WP VRGVAMN V+HPHGGG HQ +   ST  R+APP +KVG IAA RTGR
Sbjct:    1 MGKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNTPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKS--GDKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIAARRTGR 234          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_PYRAR (50S ribosomal protein L2P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.073e-48
Identity = 107/246 (43.50%), Postives = 144/246 (58.54%), Query Frame = 3
Query:   15 MGRVIRAQRKG-AGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTGR 749
            MG+ I  QR+G  GS F+S +  R GP ++  L+     GY    V E++H+PG  AP+AR+       +        AAEG+Y GQ +  G  AT   GN++ +  IPEG ++ NVE   GD G  AR+SG YAV++   P+ + T ++LPSG    + +  RA +G VAGGGR EKP LKAG  YH+ R K   +P VRG AM+P  HPHGGG+HQ  G  +   + APP QKVG I +  TGR
Sbjct:    1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYLPLEATSGRGY----VVELLHEPGLNAPVARIVTESGAEFFNY-----AAEGLYVGQVIEMGSGATPKAGNIMILGEIPEGTMIFNVEKRAGDGGKYARSSGTYAVVVGQKPEENKTIIRLPSGRVIEVDARGRATVGIVAGGGRIEKPFLKAGKKYHRARAKAWKYPTVRGKAMSPYAHPHGGGSHQKGG--TPVPKTAPPGQKVGFIGSRCTGR 235          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_SULAC (50S ribosomal protein L2P OS=Sulfolobus acidocaldarius GN=rpl2p PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.618e-48
Identity = 108/246 (43.90%), Postives = 147/246 (59.76%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTGR 749
            MG+ +  QR G G + F+S +  R GPA++ +++     G  KG + +I+H+PG  AP+ +V   +  ++        A +G+  GQ +  GK AT+  GN++ V  +PEG V+CNVE   GD G  ARA+G YAVI       +   +KL S     +    RA +G +AGGG  EKPLLKAGN Y K+RV+   WP VRGVAMN V HPHGGG HQ +   ST  R+APP +KVG IA+ RTGR
Sbjct:    1 MGKKLLQQRAGRGGINFRSPSWRRVGPARYPNIE-----GDHKGKIIDILHNPGVTAPVVKVKLDNGLQFY-----IPAVQGVAVGQEISIGKNATISNGNIVEVGQLPEGTVICNVEKLKGDGGKFARAAGSYAVI--SGKAGNKVLIKLSSEKIVEVSQNARATVGIIAGGGFVEKPLLKAGNNYWKYRVRAVKWPVVRGVAMNAVSHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIASRRTGR 234          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_ARCFU (50S ribosomal protein L2P OS=Archaeoglobus fulgidus GN=rpl2p PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 6.032e-48
Identity = 104/245 (42.45%), Postives = 141/245 (57.55%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTG 746
            MG+ I +Q +G G+  +++ +H  K  A+        ++  +   V +I HD  R  P+A V           +   +A EG+ TG  VY G    +  GN+  +++IPEG  VCN+E   GD G   RASG +  ++S   D     V++PSG +K     CRAMIG VAGGGRT+KP +KAG  YHK + K   WP+VRGVAMN V+HP GGG HQH+G   T  R+APP +KVG IAA RTG
Sbjct:    1 MGKRIISQNRGKGTPTYRAPSHRYKTDAKLLRF----KDEVVAAKVIDIQHDSARNGPVALVKLPDG-----SETYILAVEGLGTGDVVYAGDNVEIASGNITYLKNIPEGTPVCNIEAQPGDGGKFIRASGTFGFVVSREADK--VLVQMPSGKQKWFHPNCRAMIGVVAGGGRTDKPFVKAGKKYHKMKSKAAKWPRVRGVAMNAVDHPFGGGKHQHVGKPKTVSRNAPPGRKVGSIAARRTG 234          
The following BLAST results are available for this feature:
BLAST of EY659711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL2_SULIK4.177e-4943.9050S ribosomal protein L2P OS=Sulfolobus islandicus... [more]
RL2_SULIA4.177e-4943.9050S ribosomal protein L2P OS=Sulfolobus islandicus... [more]
RL2_METBF4.177e-4941.2250S ribosomal protein L2P OS=Methanosarcina barker... [more]
RL2_PYRAE5.455e-4945.1250S ribosomal protein L2P OS=Pyrobaculum aerophilu... [more]
RL2_PYRCJ7.125e-4944.7250S ribosomal protein L2P OS=Pyrobaculum calidifon... [more]
RL2_METMA9.305e-4941.8750S ribosomal protein L2P OS=Methanosarcina mazei ... [more]
RL2_SULIN1.215e-4843.5050S ribosomal protein L2P OS=Sulfolobus islandicus... [more]
RL2_PYRAR2.073e-4843.5050S ribosomal protein L2P OS=Pyrobaculum arsenatic... [more]
RL2_SULAC4.618e-4843.9050S ribosomal protein L2P OS=Sulfolobus acidocalda... [more]
RL2_ARCFU6.032e-4842.4550S ribosomal protein L2P OS=Archaeoglobus fulgidu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-C04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659711 ID=EY659711; Name=EY659711; organism=Citrus sinensis; type=EST; length=918bp
CCACGCGTCCGGAAATGGGTCGTGTGATTCGCGCACAGCGTAAGGGTGCA
GGTTCGGTCTTCAAGTCCCACACCCACCACCGTAAGGGTCCGGCCCAGTT
CCGCAGCCTCGACTTCGGTGAGCGTAATGGTTACCTCAAGGGTGTCGTCG
CAGAGATTATTCACGATCCGGGTCGTGGTGCCCCGCTGGCCCGAGTTACC
TTTCGTCACCCTTTTCGCTACATGAAACAAAAGGAGCTTTTCATTGCCGC
CGAGGGTATGTACACGGGTCAGTTCGTGTACTGCGGCAAGAAAGCCACTC
TGATGGTTGGTAATGTGTTGCCCGTTAGATCTATCCCTGAAGGAGCTGTC
GTTTGCAACGTTGAGCATCATGTTGGTGATCGCGGTGTTCTCGCTAGAGC
TTCTGGTGATTATGCCGTTATCATCAGTCATAACCCCGATAATGACACCA
CCAGGGTCAAGCTTCCATCTGGTGCCAAAAAGATTATTCCAAGTGGCTGC
AGAGCTATGATTGGGCAGGTTGCCGGCGGAGGGAGGACTGAGAAGCCCCT
TCTCAAAGCTGGTAATGCATACCACAAATTCAGAGTGAAGCGAAACTGCT
GGCCTAAGGTGCGTGGTGTGGCCATGAACCCAGTGGAGCATCCTCATGGA
GGAGGTAACCACCAGCACATTGGTCATGCTAGCACTGGTAGGCGTGATGC
TCCCCCTGACCAGAAGGTTGGTCTTATTGCAGCCAGNAGGACTGGTCGGC
TCAAAGGACAGCTGCTGCCACTGCAGCCAGGNNCGACAGCTTNAATCCNT
TGTGGTACACAATCGTCTCTCTATCGGATCTGTCATTTACTTTCCTGCTG
CATCATACTTGGAAAATTTGTCAGATTTGATCTCGGGATGATCTGATGGT
AAATTGNTGGCTTAAGTT
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