EY659709

Overview
NameEY659709
Unique NameEY659709
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659709 vs. ExPASy Swiss-Prot
Match: COF2_PIG (Cofilin-2 OS=Sus scrofa GN=CFL2 PE=2 SV=4)

HSP 1 Score: 86.6557 bits (213), Expect = 2.070e-16
Identity = 55/152 (36.18%), Postives = 87/152 (57.24%), Query Frame = 3 
Query:   84 ASGMAVHDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVIVEK-----LGEPTQTYED----FAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 485
            ASG+ V+D+    F ++K          K+  + ++F + + ++Q+IVE+     +G+   T ED    F   LP  +CRYA+YD  + T E+ +K  + FI W+P++A ++SKMIYASSKD  K++  GI+ E Q       GLD  KDR+
Sbjct:    2 ASGVTVNDEVIKVFNDMKVRKSSTQEEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDIGDTVEDPYTSFVKLLPLNDCRYALYDATYETKES-KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKHEWQVN-----GLDDIKDRS 147
[Close]
BLAST of EY659709 vs. ExPASy Swiss-Prot
Match: COF2_MOUSE (Cofilin-2 OS=Mus musculus GN=Cfl2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.070e-16
Identity = 55/152 (36.18%), Postives = 87/152 (57.24%), Query Frame = 3 
Query:   84 ASGMAVHDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVIVEK-----LGEPTQTYED----FAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 485
            ASG+ V+D+    F ++K          K+  + ++F + + ++Q+IVE+     +G+   T ED    F   LP  +CRYA+YD  + T E+ +K  + FI W+P++A ++SKMIYASSKD  K++  GI+ E Q       GLD  KDR+
Sbjct:    2 ASGVTVNDEVIKVFNDMKVRKSSTQEEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDIGDTVEDPYTSFVKLLPLNDCRYALYDATYETKES-KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKHEWQVN-----GLDDIKDRS 147
[Close]
BLAST of EY659709 vs. ExPASy Swiss-Prot
Match: COF2_HUMAN (Cofilin-2 OS=Homo sapiens GN=CFL2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.070e-16
Identity = 55/152 (36.18%), Postives = 87/152 (57.24%), Query Frame = 3 
Query:   84 ASGMAVHDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVIVEK-----LGEPTQTYED----FAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 485
            ASG+ V+D+    F ++K          K+  + ++F + + ++Q+IVE+     +G+   T ED    F   LP  +CRYA+YD  + T E+ +K  + FI W+P++A ++SKMIYASSKD  K++  GI+ E Q       GLD  KDR+
Sbjct:    2 ASGVTVNDEVIKVFNDMKVRKSSTQEEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDIGDTVEDPYTSFVKLLPLNDCRYALYDATYETKES-KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKHEWQVN-----GLDDIKDRS 147
[Close]
BLAST of EY659709 vs. ExPASy Swiss-Prot
Match: COF2_BOVIN (Cofilin-2 OS=Bos taurus GN=CFL2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.070e-16
Identity = 55/152 (36.18%), Postives = 87/152 (57.24%), Query Frame = 3 
Query:   84 ASGMAVHDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVIVEK-----LGEPTQTYED----FAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 485
            ASG+ V+D+    F ++K          K+  + ++F + + ++Q+IVE+     +G+   T ED    F   LP  +CRYA+YD  + T E+ +K  + FI W+P++A ++SKMIYASSKD  K++  GI+ E Q       GLD  KDR+
Sbjct:    2 ASGVTVNDEVIKVFNDMKVRKSSTQEEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDIGDTVEDPYTSFVKLLPLNDCRYALYDATYETKES-KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKHEWQVN-----GLDDIKDRS 147
[Close]
BLAST of EY659709 vs. ExPASy Swiss-Prot
Match: COF1_MOUSE (Cofilin-1 OS=Mus musculus GN=Cfl1 PE=1 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 2.070e-16
Identity = 53/137 (38.69%), Postives = 82/137 (59.85%), Query Frame = 3 
Query:   84 ASGMAVHDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVIVEK-----LGEPTQTYED----FAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQA 440
            ASG+AV D     F ++K          K+  + ++F + E +K +I+E+     +G+  QT +D    F   LP ++CRYA+YD  + T E+ +K  + FI W+P+ A ++SKMIYASSKD  K++L GI+ ELQA
Sbjct:    2 ASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYTTFVKMLPDKDCRYALYDATYETKES-KKEDLVFIFWAPENAPLKSKMIYASSKDAIKKKLTGIKHELQA 137
[Close]
BLAST of EY659709 vs. ExPASy Swiss-Prot
Match: CADF2_PLAFX (Cofilin/actin-depolymerizing factor homolog 2 OS=Plasmodium falciparum (isolate HB3) PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.070e-16
Identity = 47/125 (37.60%), Postives = 77/125 (61.60%), Query Frame = 3 
Query:   87 SGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPT--QTYEDFAA----SLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQAT 443
            SG+ V D+C  +F +LK K  +++I+++IE  + +VIV+ L +    ++Y+D       +L   ECRY + D    T E   ++RI+FI WSPD A+ + KM+YASSK+   R+++GI   L+ T
Sbjct:    3 SGVKVSDECVYEFNKLKIKHIHKYIIYRIENYE-EVIVDFLEQDNSLKSYKDIIIDIRNNLKTTECRYIIADMPIPTPEGVLRNRIYFIFWSPDLAKSKEKMLYASSKEYLVRKINGIFKSLEIT 126
[Close]
BLAST of EY659709 vs. ExPASy Swiss-Prot
Match: CADF2_PLAF7 (Cofilin/actin-depolymerizing factor homolog 2 OS=Plasmodium falciparum (isolate 3D7) GN=PF13_0326 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.070e-16
Identity = 47/125 (37.60%), Postives = 77/125 (61.60%), Query Frame = 3 
Query:   87 SGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPT--QTYEDFAA----SLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQAT 443
            SG+ V D+C  +F +LK K  +++I+++IE  + +VIV+ L +    ++Y+D       +L   ECRY + D    T E   ++RI+FI WSPD A+ + KM+YASSK+   R+++GI   L+ T
Sbjct:    3 SGVKVSDECVYEFNKLKIKHIHKYIIYRIENYE-EVIVDFLEQDNSLKSYKDIIIDIRNNLKTTECRYIIADMPIPTPEGVLRNRIYFIFWSPDLAKSKEKMLYASSKEYLVRKINGIFKSLEIT 126
[Close]
BLAST of EY659709 vs. ExPASy Swiss-Prot
Match: COF1_SHEEP (Cofilin-1 OS=Ovis aries GN=CFL1 PE=2 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 2.704e-16
Identity = 53/137 (38.69%), Postives = 82/137 (59.85%), Query Frame = 3 
Query:   84 ASGMAVHDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVIVEK-----LGEPTQTYED----FAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQA 440
            ASG+AV D     F ++K          K+  + ++F + E +K +I+E+     +G+  QT +D    F   LP ++CRYA+YD  + T E+ +K  + FI W+P+ A ++SKMIYASSKD  K++L GI+ ELQA
Sbjct:    2 ASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPDKDCRYALYDATYETKES-KKEDLVFIFWAPECAPLKSKMIYASSKDAIKKKLTGIKHELQA 137
[Close]
BLAST of EY659709 vs. ExPASy Swiss-Prot
Match: COF1_PIG (Cofilin-1 OS=Sus scrofa GN=CFL1 PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 2.704e-16
Identity = 53/137 (38.69%), Postives = 82/137 (59.85%), Query Frame = 3 
Query:   84 ASGMAVHDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVIVEK-----LGEPTQTYED----FAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQA 440
            ASG+AV D     F ++K          K+  + ++F + E +K +I+E+     +G+  QT +D    F   LP ++CRYA+YD  + T E+ +K  + FI W+P+ A ++SKMIYASSKD  K++L GI+ ELQA
Sbjct:    2 ASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPDKDCRYALYDATYETKES-KKEDLVFIFWAPECAPLKSKMIYASSKDAIKKKLTGIKHELQA 137
[Close]
BLAST of EY659709 vs. ExPASy Swiss-Prot
Match: COF1_MACFA (Cofilin-1 OS=Macaca fascicularis GN=CFL1 PE=2 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 2.704e-16
Identity = 53/137 (38.69%), Postives = 82/137 (59.85%), Query Frame = 3 
Query:   84 ASGMAVHDDCKLKFLELKA---------KRTYRFIVFKIEEKQKQVIVEK-----LGEPTQTYED----FAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQA 440
            ASG+AV D     F ++K          K+  + ++F + E +K +I+E+     +G+  QT +D    F   LP ++CRYA+YD  + T E+ +K  + FI W+P+ A ++SKMIYASSKD  K++L GI+ ELQA
Sbjct:    2 ASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPDKDCRYALYDATYETKES-KKEDLVFIFWAPECAPLKSKMIYASSKDAIKKKLTGIKHELQA 137
The following BLAST results are available for this feature:
BLAST of EY659709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
COF2_PIG2.070e-1636.18Cofilin-2 OS=Sus scrofa GN=CFL2 PE=2 SV=4[more]
COF2_MOUSE2.070e-1636.18Cofilin-2 OS=Mus musculus GN=Cfl2 PE=1 SV=1[more]
COF2_HUMAN2.070e-1636.18Cofilin-2 OS=Homo sapiens GN=CFL2 PE=1 SV=1[more]
COF2_BOVIN2.070e-1636.18Cofilin-2 OS=Bos taurus GN=CFL2 PE=2 SV=1[more]
COF1_MOUSE2.070e-1638.69Cofilin-1 OS=Mus musculus GN=Cfl1 PE=1 SV=3[more]
CADF2_PLAFX2.070e-1637.60Cofilin/actin-depolymerizing factor homolog 2 OS=P... [more]
CADF2_PLAF72.070e-1637.60Cofilin/actin-depolymerizing factor homolog 2 OS=P... [more]
COF1_SHEEP2.704e-1638.69Cofilin-1 OS=Ovis aries GN=CFL1 PE=2 SV=3[more]
COF1_PIG2.704e-1638.69Cofilin-1 OS=Sus scrofa GN=CFL1 PE=1 SV=3[more]
COF1_MACFA2.704e-1638.69Cofilin-1 OS=Macaca fascicularis GN=CFL1 PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-C02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659709 ID=EY659709; Name=EY659709; organism=Citrus sinensis; type=EST; length=911bp
CTCCAACAAACTTCCCTTCACCTTGCAAAATTTCTCTGTACTTTGCTTCT
TAGATCTTGATCCTAGAAACCATGGCTAATGCTGCTTCTGGGATGGCTGT
ACATGATGACTGTAAGCTAAAGTTCTTGGAGTTGAAAGCCAAGAGAACCT
ACCGCTTCATAGTATTTAAGATTGAGGAGAAGCAGAAGCAGGTCATTGTG
GAAAAACTTGGTGAGCCAACTCAAACCTATGAAGATTTTGCTGCCAGCCT
TCCTGCTGAGGAGTGCCGATATGCTGTGTATGATTATGATTTTGTTACCG
CAGAGAACTGCCAAAAAAGCAGGATTTTCTTCATTGCATGGTCTCCCGAC
ACTGCAAGAGTAAGAAGCAAGATGATTTATGCAAGCTCCAAGGACAGGTT
CAAGAGAGAGCTAGATGGCATTCAAGTGGAGCTGCAGGCAACTGATCCAT
CTGAGATGGGTCTTGACGTATTTAAAGACCGTGCCAACTAAATAAAGGCT
CCTGATCTCAGCAATTGAGATTGTTTTTATCTTTTGTGCTTTACCTAAAG
GTGAAATGTTAATAGTTTGTGGCGGCAGCTTGAATCTAACTGAATTATGA
TATTGGTTTGTTGTTCAAGTTTCACCGATGCAATATTCTCGTCTAGAACC
ATTTCAGGGNNCTTTATGATGTCTTTNNATGATTTGTGNGGTGGTGAAAG
TTATGGGATGAGTGGCTACTTATAGCTTATTCGTCAAGCTAAGGTGTTTC
ATTTGATGGGGGATGAATAACCCTCTGTTTAGGGTGTTTTACTTTGAAAA
GGATGTTTCATTTGGAACTTTATAATAGGATGTTCATTCTTCTAAAAAAA
AAAAAAAAAAAAAAAGGCGGCCGCTCTTAAAGTCCCAAGTTTCCTAAGCG
GGATTGGCAAG
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