EY659702

Overview
NameEY659702
Unique NameEY659702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA1_RALEJ (Serine hydroxymethyltransferase 1 OS=Ralstonia eutropha (strain JMP134) GN=glyA1 PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.327e-57
Identity = 112/224 (50.00%), Postives = 150/224 (66.96%), Query Frame = 3
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEED 674
            +PKLI+AGASA+A   D+ERI KV     A  + DMAH +GL+AAGV P+P  +AD VTTTTHKSLRGPRG +I  +               ++E+ IN ++FPG+QGGP  H I G AVA K+A TPE+KAYQEQV+ N +  A+TL+  G  +VSG TE+H++LV+L+ K I G   E++L   H+  NKN +P D     V  GIR+G+PA+T+RGF EE+
Sbjct:  167 KPKLIIAGASAFALRIDFERIGKVAKSIGAYFMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVILMKA--------------EHEKAINSSIFPGIQGGPLMHVIAGKAVAFKEALTPEFKAYQEQVVKNAAVLAETLIARGLRIVSGRTESHVMLVDLRAKNITGKEAERILGEAHLTVNKNAIPNDPEKPFVTSGIRVGSPAMTTRGFKEEE 376          
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_RALEH (Serine hydroxymethyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=glyA PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.039e-57
Identity = 112/224 (50.00%), Postives = 149/224 (66.52%), Query Frame = 3
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEED 674
            +PKLI+AGASA+A   D+ERI KV     A  + DMAH +GL+AAGV P+P  +AD VTTTTHKSLRGPRG +I  +               ++E+ IN A+FPG+QGGP  H I G AVA K+A TPE+K YQ+QV+ N +  A+TL+  G  +VSG TE+H++LV+L+ K I G   E++L   HI  NKN +P D     V  GIR+G+PA+T+RGF EE+
Sbjct:  167 KPKLIIAGASAFALRIDFERISKVAKSIGAYFMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVILMKA--------------EHEKAINSAIFPGIQGGPLMHVIAGKAVAFKEALTPEFKEYQQQVVKNAAVLAETLIARGLRIVSGRTESHVMLVDLRAKNITGKEAERILGEAHITVNKNAIPNDPEKPFVTSGIRLGSPAMTTRGFKEEE 376          
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_LEGPL (Serine hydroxymethyltransferase OS=Legionella pneumophila (strain Lens) GN=glyA PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.039e-57
Identity = 113/224 (50.45%), Postives = 152/224 (67.86%), Query Frame = 3
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEED 674
            +PKLI+AG SAY+R+ D+ R R++ +K  A ++AD+AH++GLVA G+ PSP  YADVVTTTTHK+LRGPRG +I        + K+ +E+    E+K+N AVFPG+QGGP  H I   AVA  +A  PE+K YQ+QVL+N       L   GY++VSGGT+NHL+LV+L NK I G   +  L   +I  NKN+VP D  S  V  G+R+GTPA T+RGF E +
Sbjct:  167 KPKLIIAGFSAYSRILDWARFREIADKVGAYLMADIAHVAGLVAVGLYPSPVPYADVVTTTTHKTLRGPRGGLI--------LCKENEEI----EKKLNSAVFPGMQGGPLMHVIAAKAVAFAEALLPEFKTYQQQVLANARTMCSVLQSRGYDIVSGGTDNHLLLVDLINKGITGKEADAALGRANITVNKNSVPNDPRSPFVTSGLRLGTPAATTRGFKERE 378          
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CLOK5 (Serine hydroxymethyltransferase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=glyA PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.039e-57
Identity = 112/237 (47.26%), Postives = 158/237 (66.67%), Query Frame = 3
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713
            +PK+IV+GASAY R  D+++IR++C++  A M+ DMAHI+G++AAG   SP  YAD VTTTTHK+LRGPRG  I  ++               Y   +++ +FPG+QGGP  H I   AV   +A   EYK Y +Q++ N   F + L++ G+ LVSGGT+NHL+LV+L NK I G  +E++L+ V+I  NKN +P D +   V  GIR+GTPA+T+RGF EE+  KVAYF + AV+
Sbjct:  165 KPKMIVSGASAYPRKIDFKKIREICDEVGAYMMVDMAHIAGIIAAGRHESPVPYADFVTTTTHKTLRGPRGGAIICKE--------------KYGAALDKTIFPGIQGGPLMHIIAAKAVCFGEALKDEYKEYIDQIIKNAKVFGEELVKYGFRLVSGGTDNHLLLVDLTNKNITGKDLEELLDKVNITVNKNAIPFDKLKPNVTSGIRVGTPAVTTRGFKEEEMKKVAYFINKAVE 387          
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CLOK1 (Serine hydroxymethyltransferase OS=Clostridium kluyveri (strain NBRC 12016) GN=glyA PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.039e-57
Identity = 112/237 (47.26%), Postives = 158/237 (66.67%), Query Frame = 3
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713
            +PK+IV+GASAY R  D+++IR++C++  A M+ DMAHI+G++AAG   SP  YAD VTTTTHK+LRGPRG  I  ++               Y   +++ +FPG+QGGP  H I   AV   +A   EYK Y +Q++ N   F + L++ G+ LVSGGT+NHL+LV+L NK I G  +E++L+ V+I  NKN +P D +   V  GIR+GTPA+T+RGF EE+  KVAYF + AV+
Sbjct:  165 KPKMIVSGASAYPRKIDFKKIREICDEVGAYMMVDMAHIAGIIAAGRHESPVPYADFVTTTTHKTLRGPRGGAIICKE--------------KYGAALDKTIFPGIQGGPLMHIIAAKAVCFGEALKDEYKEYIDQIIKNAKVFGEELVKYGFRLVSGGTDNHLLLVDLTNKNITGKDLEELLDKVNITVNKNAIPFDKLKPNVTSGIRVGTPAVTTRGFKEEEMKKVAYFINKAVE 387          
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CUPTR (Serine hydroxymethyltransferase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=glyA PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.184e-57
Identity = 111/224 (49.55%), Postives = 150/224 (66.96%), Query Frame = 3
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEED 674
            +PKLI+AGASA+A   D+ERI KV     A  + DMAH +GL+AAGV P+P  +AD VTTTTHKSLRGPRG +I  +               ++E+ IN ++FPG+QGGP  H I G AVA K+A TPE+KAYQ+QV+ N +  A+TL+  G  +VSG TE+H++LV+L+ K I G   E++L   H+  NKN +P D     V  GIR+G+PA+T+RGF EE+
Sbjct:  167 KPKLIIAGASAFALRIDFERIGKVAKSIGAYFMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVILMKA--------------EHEKAINSSIFPGIQGGPLMHVIAGKAVAFKEALTPEFKAYQQQVVKNAAVLAETLIARGLRIVSGRTESHVMLVDLRAKNITGKEAERILGEAHLTVNKNAIPNDPEKPFVTSGIRVGSPAMTTRGFKEEE 376          
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_ACIAC (Serine hydroxymethyltransferase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=glyA PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.184e-57
Identity = 113/224 (50.45%), Postives = 148/224 (66.07%), Query Frame = 3
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEED 674
            +PKLI+AGASAY+   D+ER  K+  +  AI   D+AH +GLV AG  P+P  +ADVVT+TTHKSLRGPRG +I  +               ++E+ IN A+FPGLQGGP  H I   AVA K+A TPE+KAYQ+QV  N   FA+TL+E G  ++SG TE+H++LV+L+ K I G   E  L   HI  NKN++P D    MV  GIR+GTPA+T+RGF EE+
Sbjct:  166 KPKLIIAGASAYSLRIDFERFAKIAKEVGAIFWVDIAHYAGLVVAGEYPNPVPFADVVTSTTHKSLRGPRGGIILMKA--------------EHEKAINSAIFPGLQGGPLEHVIAAKAVAFKEALTPEFKAYQQQVAKNAKVFAETLIERGLRIISGRTESHVMLVDLRAKGITGKAAEAALGQAHITINKNSIPNDPEKPMVTSGIRVGTPAITTRGFKEEE 375          
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_MOOTA (Serine hydroxymethyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=glyA PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.770e-57
Identity = 115/236 (48.73%), Postives = 154/236 (65.25%), Query Frame = 3
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 710
            RP+LIVAGASAY R+ D+ R R++ ++  A+++ DMAHI+GLVAAG+ P+P  YA  VTTTTHK++RGPRG +I   +              +Y   I++AVFPG+QGGP  H I   AVALK+A  PE+K YQEQ+++N    A  L+  G+ LVSGGT+NHL+LV+L+NK I G   E +L +V I  NKN +P D     V  GIR+GT ALTSRG   +   +VA   D A+
Sbjct:  165 RPRLIVAGASAYPRVIDFARFREIADEVGALLMVDMAHIAGLVAAGIHPNPVPYAHFVTTTTHKTMRGPRGGIILTTR--------------EYARDIDKAVFPGVQGGPLMHVIAAKAVALKEAMLPEFKRYQEQIVTNARTLADALMGYGFNLVSGGTDNHLMLVDLRNKNITGREAEDILASVQITVNKNAIPFDPQKPSVTSGIRLGTAALTSRGMDADAMVQVARAIDLAL 386          
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_LEGPC (Serine hydroxymethyltransferase OS=Legionella pneumophila (strain Corby) GN=glyA PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.770e-57
Identity = 112/224 (50.00%), Postives = 152/224 (67.86%), Query Frame = 3
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEED 674
            +PKLI+AG SAY+R+ D+ R R++ +K  A ++AD+AH++GLVA G+ PSP  YADVVTTTTHK+LRGPRG +I        + K+ +E+    E+K+N +VFPG+QGGP  H I   AVA  +A  PE+K YQ+QVL+N       L   GY++VSGGT+NHL+LV+L NK I G   +  L   +I  NKN+VP D  S  V  G+R+GTPA T+RGF E +
Sbjct:  167 KPKLIIAGFSAYSRILDWARFREIADKVGAYLMADIAHVAGLVAVGLYPSPVPYADVVTTTTHKTLRGPRGGLI--------LCKENEEI----EKKLNSSVFPGMQGGPLMHVIAAKAVAFAEALLPEFKTYQQQVLANARTMCSVLQSRGYDIVSGGTDNHLLLVDLINKGITGKEADAALGRANITVNKNSVPNDPRSPFVTSGLRLGTPAATTRGFKERE 378          
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_STAHJ (Serine hydroxymethyltransferase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=glyA PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.842e-57
Identity = 116/264 (43.94%), Postives = 171/264 (64.77%), Query Frame = 3
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNK-RIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGTKLKNSWPQHSPLTS 791
            +PKLIVAG SAY+R  D+++ +++ ++  A ++ DMAHI+GLVAAG+ P+P E+AD VTTTTHK+LRGPRG +I  ++              +Y++ I++ +FPG+QGGP  H I   AVA  +A   ++K YQEQV+ N    +QTL E G+ +VSGGT+NHL+ V++KN   + G   E  L+++ I  NKNT+P D   A V  GIR+GTP  T+RGF EE F +V         +++ +K+ N+ TKLK +  + S LT+
Sbjct:  163 KPKLIVAGTSAYSRQLDFKKFKEIADEVGAKLMVDMAHIAGLVAAGLHPNPVEHADFVTTTTHKTLRGPRGGLILCKE--------------EYKKDIDKTIFPGIQGGPLEHVIAAKAVAFGEALEQDFKVYQEQVIKNAKVLSQTLQEEGFRIVSGGTDNHLLSVDVKNSVNVTGKEAEATLDSIGITCNKNTIPFDQEKAFVTSGIRLGTPTATTRGFDEEAFKEVGRI------ISLALKNPNNDTKLKEARERVSRLTA 406          
The following BLAST results are available for this feature:
BLAST of EY659702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA1_RALEJ2.327e-5750.00Serine hydroxymethyltransferase 1 OS=Ralstonia eut... [more]
GLYA_RALEH3.039e-5750.00Serine hydroxymethyltransferase OS=Ralstonia eutro... [more]
GLYA_LEGPL3.039e-5750.45Serine hydroxymethyltransferase OS=Legionella pneu... [more]
GLYA_CLOK53.039e-5747.26Serine hydroxymethyltransferase OS=Clostridium klu... [more]
GLYA_CLOK13.039e-5747.26Serine hydroxymethyltransferase OS=Clostridium klu... [more]
GLYA_CUPTR5.184e-5749.55Serine hydroxymethyltransferase OS=Cupriavidus tai... [more]
GLYA_ACIAC5.184e-5750.45Serine hydroxymethyltransferase OS=Acidovorax aven... [more]
GLYA_MOOTA6.770e-5748.73Serine hydroxymethyltransferase OS=Moorella thermo... [more]
GLYA_LEGPC6.770e-5750.00Serine hydroxymethyltransferase OS=Legionella pneu... [more]
GLYA_STAHJ8.842e-5743.94Serine hydroxymethyltransferase OS=Staphylococcus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659702 ID=EY659702; Name=EY659702; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGAAATTGATTGTTGCTGGTGCTAGTGCTTATGCACGATTG
TACGATTATGAGCGTATTCGCAAGGTTTGCAACAAACAAAAAGCTATAAT
GTTGGCAGATATGGCACACATTAGTGGTTTGGTTGCTGCTGGTGTCATCC
CTTCACCTTTTGAGTATGCAGATGTTGTGACCACCACAACTCACAAATCA
CTTCGTGGGCCACGTGGAGCCATGATTTTCTTTAGGAAGGGAGTGAAAGA
GATTAACAAACAAGGGAAGGAGGTGTTTTATGATTATGAAGAAAAAATAA
ATCAAGCTGTCTTTCCTGGACTCCAAGGTGGCCCACACAACCACACAATT
ACTGGTTTAGCAGTTGCCTTGAAACAGGCCACTACTCCAGAGTATAAAGC
CTATCAAGAGCAAGTTCTGAGCAATTGCTCGAAATTTGCACAGACTCTGC
TCGAGATGGGCTATGAACTTGTTTCTGGTGGAACTGAGAACCATCTAGTG
TTGGTGAATTTGAAAAACAAGAGAATTGATGGTTCCAGAGTTGAAAAAGT
GTTGGAAGCTGTTCATATTGCAGCCAACAAAAACACTGTTCCTGGGGATG
TGTCAGCCATGGTTCCAGGTGGCATCAGGATGGGAACTCCGGCTCTTACT
TCTAGGGGATTTGTTGAGGAGGATTTTGCCAAGGTAGCATATTTCTTTGA
TGCTGCTGTGAAGTTGGCTGTGAAGATCAAGTCTGAAAACTCAGGAACAA
AGTTGAAGAATTCGTGGCCACAACACAGTCCGCTTACTTCAATCCGAGAT
TGCGAACTTCGCCATGATGTGANGAGTATGCAAACAGTCCCCACATTGGG
TTTGAAAAGAAACCATGAGTACAGACTGAGAGAAAACGCACT
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