EY659702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_GEOLS (Serine hydroxymethyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=glyA PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 4.388e-56 Identity = 113/236 (47.88%), Postives = 149/236 (63.14%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 710 +PK+IV GASAY R+ D+ R + +K A ++ DMAHI+GLVAAGV P+P YA+ VTTTTHK+LRGPRG MI R+ +Y + IN +FPG+QGGP H I AVA K+A PE+K YQ+Q++ N +K A+ L+ G++L SGGT+NHL+L+N I G E+ L+ I NKNTVP + S V GIR+GTPA TS G E + +VA F AV Sbjct: 163 KPKMIVVGASAYPRIIDFPAFRAIADKVGAKVMVDMAHIAGLVAAGVHPNPVPYAEFVTTTTHKTLRGPRGGMILCRE--------------EYAKTINSQIFPGIQGGPLMHVIAAKAVAFKEALQPEFKTYQQQIVKNAAKLAECLMAKGFKLTSGGTDNHLMLINFTGTEITGKAAEEALDKAGITVNKNTVPFETRSPFVTSGIRVGTPACTSHGLKETEMEQVAGFIADAV 384
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_DIAST (Serine hydroxymethyltransferase OS=Diaphorobacter sp. (strain TPSY) GN=glyA PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 4.388e-56 Identity = 112/224 (50.00%), Postives = 146/224 (65.18%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEED 674 +PKLI+AGASAYA D+ER K+ + AI D+AH +GLV AG P+P +ADVVT+TTHKSLRGPRG +I + ++E+ IN A+FPGLQGGP H I AVA K+A +PE+K YQ+QV N FA+TL++ G +VSG TE+H++LV+L+ K I G E L HI NKN +P D MV GIR+GTPA+T+RGF EE+ Sbjct: 166 KPKLIIAGASAYALRIDFERFAKIAKEVGAIFWVDIAHYAGLVVAGEYPNPVPFADVVTSTTHKSLRGPRGGIILMKA--------------EHEKAINSAIFPGLQGGPLEHVIAAKAVAFKEALSPEFKQYQQQVTKNAKVFAETLIQRGLRIVSGRTESHVMLVDLRAKGITGKEAEAALGKAHITINKNAIPNDPEKPMVTSGIRVGTPAITTRGFKEEE 375
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_ACISJ (Serine hydroxymethyltransferase OS=Acidovorax sp. (strain JS42) GN=glyA PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 4.388e-56 Identity = 112/224 (50.00%), Postives = 146/224 (65.18%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEED 674 +PKLI+AGASAYA D+ER K+ + AI D+AH +GLV AG P+P +ADVVT+TTHKSLRGPRG +I + ++E+ IN A+FPGLQGGP H I AVA K+A +PE+K YQ+QV N FA+TL++ G +VSG TE+H++LV+L+ K I G E L HI NKN +P D MV GIR+GTPA+T+RGF EE+ Sbjct: 166 KPKLIIAGASAYALRIDFERFAKIAKEVGAIFWVDIAHYAGLVVAGEYPNPVPFADVVTSTTHKSLRGPRGGIILMKA--------------EHEKAINSAIFPGLQGGPLEHVIAAKAVAFKEALSPEFKQYQQQVTKNAKVFAETLIQRGLRIVSGRTESHVMLVDLRAKGITGKEAEAALGKAHITINKNAIPNDPEKPMVTSGIRVGTPAITTRGFKEEE 375
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYC_ENCCU (Serine hydroxymethyltransferase, cytosolic OS=Encephalitozoon cuniculi GN=SHMT-1 PE=3 SV=2) HSP 1 Score: 218.009 bits (554), Expect = 5.731e-56 Identity = 107/236 (45.34%), Postives = 161/236 (68.22%), Query Frame = 3 Query: 9 PKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 716 P +++ G SAY+R DY+R++ + + A + AD++HIS LVA+G++ SPFE+ D+V TTT K LRGPRGA+IF+R+ V K G+ V D + +IN AVFP LQGGPHNHTI G+A AL A TPE+ Y +V+ N + L +G ++++GGT+NH++LV+L++ +DG+ VE + +A+ I+ N+N + G+ S + P GIR+GT A+T+RGF E+ +V VKL Sbjct: 182 PHILICGYSAYSRDIDYKRLQSIAGRNGAFLFADISHISPLVASGLMNSPFEHCDIVMTTTQKGLRGPRGALIFYRRAV---TKNGETV--DLDARINFAVFPMLQGGPHNHTIAGIASALLHAGTPEFAEYTRRVVENSRELCSRLQSLGLDILTGGTDNHMLLVDLRSTGVDGAAVEHMCDALGISLNRNAIVGNSSPLSPSGIRVGTYAVTARGFGPEEMREVGDIIGGVVKL 412
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_VARPS (Serine hydroxymethyltransferase OS=Variovorax paradoxus (strain S110) GN=glyA PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 5.731e-56 Identity = 113/223 (50.67%), Postives = 147/223 (65.92%), Query Frame = 3 Query: 9 PKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEED 674 PKLI+AGASAY+ D+ER KV AI + D+AH +GLVAAGV P+P +ADVVT+TTHKSLRGPRG +I + +E+ IN A+FPGLQGGP H I AVA K+A +PE+KAYQ+QV+ N A TL E G +VSG TE+H++LV+L+ K I G E VL + H+ NKN +P D MV G+R+GTPA+T+RGF +E+ Sbjct: 167 PKLIIAGASAYSLRIDFERFAKVAKDVGAIFMVDIAHYAGLVAAGVYPNPVPHADVVTSTTHKSLRGPRGGIILMKS--------------QHEKAINSAIFPGLQGGPLMHVIAAKAVAFKEAMSPEFKAYQQQVVKNAQIVADTLTERGLRIVSGRTESHVMLVDLRAKGITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGFRDEE 375
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_RHOFD (Serine hydroxymethyltransferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=glyA PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 5.731e-56 Identity = 110/225 (48.89%), Postives = 149/225 (66.22%), Query Frame = 3 Query: 3 TRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEED 674 ++PKLI+AGASAY+ D+ R KV AI + DMAH +GL+AAG+ P+P +ADVVT+TTHKSLRGPRG +I + +E+ IN A+FPGLQGGP H I AVA K+A PE+K YQ+QVL+N A+TL+ G +VSG TE+H++LV+L++K I G E VL + H+ NKN +P D MV G+R+GTPA+T+RGF +E+ Sbjct: 165 SKPKLIIAGASAYSLRIDFARFAKVAKDVGAIFMVDMAHYAGLIAAGIYPNPVPHADVVTSTTHKSLRGPRGGIILMKA--------------QHEKAINSAIFPGLQGGPLMHVIAAKAVAFKEALQPEFKVYQQQVLTNARVVAETLVSRGLRIVSGRTESHVMLVDLRSKSITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGFKDEE 375
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_DESAP (Serine hydroxymethyltransferase OS=Desulforudis audaxviator (strain MP104C) GN=glyA PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 5.731e-56 Identity = 114/229 (49.78%), Postives = 151/229 (65.94%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVS-AMVPGGIRMGTPALTSRGFVEEDFAKVA 689 RPKLIV GASAY R D+ R+R + + A+++ DMAHI+GL+AAG+ SP YADVVTTTTHK+LRGPRG MI + +Y I++AVFPG+QGGP H I AVAL +A PE+K YQEQ++ N AQ L E G+ELV+GGT+ HL+LV+L+NK + G+ E +L+ V + NKN VP D V GIR+GTPA+T+RG E+ ++A Sbjct: 166 RPKLIVGGASAYPRELDFARMRAIADDVGALLMIDMAHIAGLIAAGLHMSPVPYADVVTTTTHKTLRGPRGGMILCPE--------------EYAAAIDKAVFPGIQGGPLMHVIAAKAVALGEAQRPEFKTYQEQIVKNARALAQALQERGFELVAGGTDTHLILVDLRNKGLTGAVAEDLLDRVDVTVNKNMVPFDPQPPRVTSGIRIGTPAVTTRGMKEDSMVQIA 380
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA3_BURS3 (Serine hydroxymethyltransferase 3 OS=Burkholderia sp. (strain 383) GN=glyA3 PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 5.731e-56 Identity = 109/220 (49.55%), Postives = 147/220 (66.82%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGF 662 +PKLIVAGASA++ D+ER+ K+ A ++ DMAH +GL+AAGV P+P +AD VTTTTHKSLRGPRG +I + +YE+ IN A+FPG+QGGP H I G AVA K+A +PE+KAYQE+V+ N A+TL++ G +VSG TE+H++LV+L+ K I G E L A HI NKN +P D V G+R+G+PA+T+RGF Sbjct: 167 KPKLIVAGASAFSLKIDFERLAKIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVILMKA--------------EYEKPINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKAYQEKVVENARVLAETLVKRGLRIVSGRTESHVMLVDLRAKHITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGVRLGSPAMTTRGF 372
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA2_BURS3 (Serine hydroxymethyltransferase 2 OS=Burkholderia sp. (strain 383) GN=glyA2 PE=3 SV=2) HSP 1 Score: 218.009 bits (554), Expect = 5.731e-56 Identity = 109/220 (49.55%), Postives = 147/220 (66.82%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGF 662 +PKLIVAGASA++ D+ER+ K+ A ++ DMAH +GL+AAGV P+P +AD VTTTTHKSLRGPRG +I + +YE+ IN A+FPG+QGGP H I G AVA K+A +PE+KAYQE+V+ N A+TL++ G +VSG TE+H++LV+L+ K I G E L A HI NKN +P D V G+R+G+PA+T+RGF Sbjct: 167 KPKLIVAGASAFSLKIDFERLAKIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVILMKA--------------EYEKPINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKAYQEKVVENARVLAETLVKRGLRIVSGRTESHVMLVDLRAKNITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGVRLGSPAMTTRGF 372
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_STACT (Serine hydroxymethyltransferase OS=Staphylococcus carnosus (strain TM300) GN=glyA PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 7.485e-56 Identity = 117/264 (44.32%), Postives = 168/264 (63.64%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNK-RIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGTKLKNSWPQHSPLTS 791 +PKLIVAGASAY R D+++ +++ ++ A ++ DMAHI+GLVAAG+ +P +YAD VTTTTHK+LRGPRG MI ++ +Y ++I++ +FPG+QGGP H I AVA +A P++K YQEQV+ N A TL+E G+ +VSGGT+NHLV V++K I G E+ L+ V I NKNT+P D V G+R+GTPA T+RGF E DF +VA +++ +++ KLK + + + LTS Sbjct: 163 KPKLIVAGASAYPREIDFKKFKEIADEVGAKLMVDMAHIAGLVAAGLHQNPVDYADFVTTTTHKTLRGPRGGMILTKE--------------EYAKQIDKTIFPGIQGGPLEHVIAAKAVAFGEALNPDFKDYQEQVVKNAKALADTLIEEGFRVVSGGTDNHLVAVDVKGSFGITGKEAEEALDEVGITCNKNTIPFDQEKPFVTSGLRLGTPAATTRGFEEADFEEVAKI------ISLVVQNPKDEAKLKEASDRVAALTS 406 The following BLAST results are available for this feature:
BLAST of EY659702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659702 ID=EY659702; Name=EY659702; organism=Citrus sinensis; type=EST; length=892bpback to top |