EY659683

Overview
NameEY659683
Unique NameEY659683
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length486
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1066 contig Csv1_Contig1066:334..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659683 vs. ExPASy Swiss-Prot
Match: E4PD_AERHH (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=epd PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 7.072e-13
Identity = 46/141 (32.62%), Postives = 82/141 (58.16%), Query Frame = 1
Query:   58 VKIGINGFGRIGRLVARVILQ--RD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK---DAPMFVVGVN 462
            +KI ING+GRIGR V R + +  RD ++++VA+N+     + M ++ ++D+ HG++ HH +++  + ++L GE  +++F  R+P  +PW   G + V++ TGVF                V+ S P++   DA + V GVN
Sbjct:    2 IKIAINGYGRIGRNVLRALYESGRDKNIKIVAINE-LAAPEAMVHLTRFDTSHGRF-HHPVQLAGN-SMLVGEDLISLFAERDPSRLPWRALGVDVVLDCTGVFGSRADAELHLAAGAGKVLFSHPAEADVDATI-VYGVN 138          
BLAST of EY659683 vs. ExPASy Swiss-Prot
Match: G3P1_STAAW (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MW2) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.206e-12
Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 1
Query:   58 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENE 471
            VK+ INGFGRIGRL  R I + + +E+VAVND     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW +   + V+E TG +T               V+ISAP+  D    V   N  E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of EY659683 vs. ExPASy Swiss-Prot
Match: G3P1_STAAU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus GN=gapA1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.206e-12
Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 1
Query:   58 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENE 471
            VK+ INGFGRIGRL  R I + + +E+VAVND     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW +   + V+E TG +T               V+ISAP+  D    V   N  E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of EY659683 vs. ExPASy Swiss-Prot
Match: G3P1_STAAS (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MSSA476) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.206e-12
Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 1
Query:   58 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENE 471
            VK+ INGFGRIGRL  R I + + +E+VAVND     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW +   + V+E TG +T               V+ISAP+  D    V   N  E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of EY659683 vs. ExPASy Swiss-Prot
Match: G3P1_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MRSA252) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.206e-12
Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 1
Query:   58 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENE 471
            VK+ INGFGRIGRL  R I + + +E+VAVND     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW +   + V+E TG +T               V+ISAP+  D    V   N  E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of EY659683 vs. ExPASy Swiss-Prot
Match: G3P1_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain N315) GN=gapA1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.206e-12
Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 1
Query:   58 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENE 471
            VK+ INGFGRIGRL  R I + + +E+VAVND     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW +   + V+E TG +T               V+ISAP+  D    V   N  E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of EY659683 vs. ExPASy Swiss-Prot
Match: G3P1_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.206e-12
Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 1
Query:   58 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENE 471
            VK+ INGFGRIGRL  R I + + +E+VAVND     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW +   + V+E TG +T               V+ISAP+  D    V   N  E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of EY659683 vs. ExPASy Swiss-Prot
Match: G3P1_STAAC (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain COL) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.206e-12
Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 1
Query:   58 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENE 471
            VK+ INGFGRIGRL  R I + + +E+VAVND     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW +   + V+E TG +T               V+ISAP+  D    V   N  E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of EY659683 vs. ExPASy Swiss-Prot
Match: E4PD_SALEP (D-erythrose-4-phosphate dehydrogenase OS=Salmonella enteritidis PT4 (strain P125109) GN=epd PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.575e-12
Identity = 49/148 (33.11%), Postives = 78/148 (52.70%), Query Frame = 1
Query:   58 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNENEYKPE 483
            V+I INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     +V+ ++  LF G+  + +   R   ++PW E G + V++ TGV+                V+ S P S D    VV GVN+NE + E
Sbjct:    3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNELRAE 146          
BLAST of EY659683 vs. ExPASy Swiss-Prot
Match: E4PD_SALDC (D-erythrose-4-phosphate dehydrogenase OS=Salmonella dublin (strain CT_02021853) GN=epd PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.575e-12
Identity = 49/148 (33.11%), Postives = 78/148 (52.70%), Query Frame = 1
Query:   58 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNENEYKPE 483
            V+I INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     +V+ ++  LF G+  + +   R   ++PW E G + V++ TGV+                V+ S P S D    VV GVN+NE + E
Sbjct:    3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNELRAE 146          
The following BLAST results are available for this feature:
BLAST of EY659683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 312
Match NameE-valueIdentityDescription
E4PD_AERHH7.072e-1332.62D-erythrose-4-phosphate dehydrogenase OS=Aeromonas... [more]
G3P1_STAAW1.206e-1234.53Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAU1.206e-1234.53Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAS1.206e-1234.53Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAR1.206e-1234.53Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAN1.206e-1234.53Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAM1.206e-1234.53Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAC1.206e-1234.53Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
E4PD_SALEP1.575e-1233.11D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_SALDC1.575e-1233.11D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-H12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659683 ID=EY659683; Name=EY659683; organism=Citrus sinensis; type=EST; length=486bp
CAACTTTCTTCACCACTCTTTCACCGCTCAATTTCATCTCTCGAGAATAT
GGGGAAGGTCAAGATCGGAATCAACGGATTCGGAAGAATTGGTAGGCTGG
TGGCAAGAGTCATCTTGCAGAGGGACGATGTTGAACTCGTTGCTGTTAAT
GATCCCTTTATCACAACCGATTACATGACATACATGTTTAAGTACGACAG
TGTTCACGGTCAATGGAAGCACCATGAATTGAAGGTTAAGGACGATAAGA
CCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCA
GAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGAGTCGAC
TGGAGTCTTTACTGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTG
CTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGTT
GTCGGTGTCAATGAAAACGAGTACAAACCAGAGCTC
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