EY659680

Overview
NameEY659680
Unique NameEY659680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_SULMW (60 kDa chaperonin OS=Sulcia muelleri (strain GWSS) GN=groL PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51
Identity = 103/203 (50.74%), Postives = 147/203 (72.41%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDD-IKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF 801
            AK+I FD  +R  ++ G+D +++AV +TLGP+GRNVVL + FG P+V  DGV++A+ IEL DP+EN GA +++EVASKTND AGDGTTTA+VLA+ I++ GL +V +GANP+ LKRGIDK V  +V +L+K++R + G ++ IK VA+ISA ND+ IG +I+ A DKVG +GV+++              GM+  +GY SP F
Sbjct:    2 AKNIQFDIEARDKLKKGVDALANAVKVTLGPKGRNVVLQKSFGGPQVTKDGVSVAKEIELEDPIENLGAQMVKEVASKTNDIAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGIDKAVEAVVNDLKKQSREVGGSNEKIKQVASISANNDEAIGELISVAFDKVGKEGVITVEEAKGIETTVDVVEGMQFDRGYQSPYF 204          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_PELLD (60 kDa chaperonin OS=Pelodictyon luteolum (strain DSM 273) GN=groL PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51
Identity = 103/203 (50.74%), Postives = 142/203 (69.95%), Query Frame = 1
Query:  196 SAKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF 801
            +AKDI FD  +RA ++ G+DK+++ V +TLGP GRNV++D+ FG+P    DGVT+A+ IEL D +EN GA ++REVASKT+D AGDGTTTA+VLA+ I + GL +V +GA P+ LKRGID+ V  +V EL   +R I G+ +I  V TISA ND  IG +IA+A+DKVG DGV+++              GM+  +GY+SP F
Sbjct:    2 TAKDILFDADARAKLKVGVDKLANTVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEIELDDAIENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVAAGARPIDLKRGIDRAVKEVVAELRNISRSISGKKEIAQVGTISANNDPEIGELIAEAMDKVGKDGVITVEEAKGMETELKVVEGMQFDRGYLSPYF 204          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_EXIS2 (60 kDa chaperonin OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=groL PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51
Identity = 110/227 (48.46%), Postives = 155/227 (68.28%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLD-EFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISP-QFSQTLRNYC*I*NARVLVTIKNFCN 873
            AKDI F + +R AM  G+D ++DAV +T+GP+GRNVVL+ +FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTN+ AGDGTTTA+VLA+ +I+ GL +VT+GANP+ +++GI+K V   VEEL   A+PIEG++ I  VA ISA  D+ +G +IA+A+++VG DGV++I              GM+  +GY SP   + + +    + N  +L+T K   N
Sbjct:    2 AKDILFSEEARRAMLRGVDALADAVKVTIGPKGRNVVLERKFGSPLITNDGVTIAKEIELEDHFENMGAKLVAEVASKTNEIAGDGTTTATVLAQAMIREGLKNVTAGANPMVIRKGIEKAVRRAVEELHAIAKPIEGKEAIAQVAAISAA-DEEVGQLIAEAMERVGQDGVITIEESRGFTTELDVVEGMQFDRGYASPYMITDSDKMEAVLENPYILITDKKISN 227          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_CLOTH (60 kDa chaperonin OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=groL PE=1 SV=3)

HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51
Identity = 107/227 (47.14%), Postives = 158/227 (69.60%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISP-QFSQTLRNYC*I*NARVLVTIKNFCN 873
            AK I F + +R A++ G+++++D V +TLGP+GRNVVLD+ FGSP + NDGVTIA+ IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +V +GANP+ LK+GI K V   VE +++ ++ ++G++DI  VA+ISA ND++IG +IADA++KV  DGV+++              GM+  +GY+SP   + T +    +    +L+T K   N
Sbjct:    2 AKQIKFGEEARRALERGVNQLADTVKVTLGPKGRNVVLDKKFGSPMITNDGVTIAKEIELEDPFENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVAAGANPMLLKKGIAKAVDAAVEGIKEISQKVKGKEDIARVASISA-NDEVIGELIADAMEKVTNDGVITVEEAKTMGTNLEIVEGMQFDRGYVSPYMVTDTEKMEAVLDEPYILITDKKISN 227          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_CAMLR (60 kDa chaperonin OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=groL PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51
Identity = 98/202 (48.51%), Postives = 143/202 (70.79%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF 801
            AK+I F   +R  +  G+ K++DAV +T+GPRGRNV++ + FG+P +  DGV++A+ +EL D +EN GA+L+REVASKT D AGDGTTTA+VLA  I K GL ++T+GANP+ +KRG+DK    +V EL+K +R ++ + +I  VATISA +D+ IG +IADA++KVG DGV+++              GM+  +GY+SP F
Sbjct:    2 AKEIFFSDEARNKLYEGVKKLNDAVKVTMGPRGRNVLIQKSFGAPTITKDGVSVAKEVELKDSLENMGASLVREVASKTADQAGDGTTTATVLAHAIFKEGLRNITAGANPIEVKRGMDKACEAIVAELKKLSREVKDKKEIAQVATISANSDEKIGNLIADAMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYF 203          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_CAMHC (60 kDa chaperonin OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=groL PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51
Identity = 98/202 (48.51%), Postives = 144/202 (71.29%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF 801
            AKDI F   +R  +  G+ K++D V +T+GPRGRNV++ + FG+P +  DGV++A+ +EL D +EN GAAL++EVA+KTND AGDGTTTA+VLA  I K GL ++T+GANP+ +KRG+DK    +V EL+K ++P++ + +I  VATISA +D+ IG +IADA++KVG DGV+++              GM+  +GY+SP F
Sbjct:    2 AKDIIFSDDARNRLYDGVKKLNDTVKVTMGPRGRNVLIQKSFGAPAITKDGVSVAKEVELKDTIENMGAALVKEVANKTNDQAGDGTTTATVLAHAIFKEGLRNITAGANPIEVKRGMDKICADVVAELKKISKPVKDKKEIAQVATISANSDESIGKLIADAMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYF 203          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_BACLD (60 kDa chaperonin OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=groL PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51
Identity = 110/227 (48.46%), Postives = 158/227 (69.60%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISP-QFSQTLRNYC*I*NARVLVTIKNFCN 873
            AKDI F + +R +M  G+D ++DAV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANPV +++GI++ V   VE L++ ++PIEG++ I  VA+ISA  D+ +G++IA+A+++VG DGV++I              GM+  +GY SP   + + +    + N  +LVT K   N
Sbjct:    2 AKDIKFSEEARRSMLRGVDALADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPVGVRKGIEQAVAVAVESLKEISKPIEGKESIAQVASISAA-DEEVGSLIAEAMERVGNDGVITIEESKGFTTELEVVEGMQFDRGYASPYMVTDSDKMEAVLENPYILVTDKKITN 227          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH602_SYNPX (60 kDa chaperonin 2 OS=Synechococcus sp. (strain WH8102) GN=groL2 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.363e-51
Identity = 105/221 (47.51%), Postives = 155/221 (70.14%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF-SQTLRNYC*I*NARVLVT 855
            AK ++F   SR+A++ G+D ++DAV +T+GPRGRNVVL++ FG+P +VNDG TIAR IEL DP EN GA LI++VAS+T D AGDGTTTA+VLA+ +++ GL +  +GA+PV L+RG++K V  +V+ L+++++P+ G D I+ VAT+S+G DD +G MIA+A+D+V  DGV+++              GM   +GY SP F +   R  C   N  +L+T
Sbjct:    2 AKLLSFSDESRSALERGVDALADAVRVTIGPRGRNVVLEKKFGAPDIVNDGDTIAREIELDDPFENLGAKLIQQVASRTKDKAGDGTTTATVLAQAMVREGLRNTAAGASPVELRRGMEKAVAQVVDGLQQRSQPVAG-DAIRQVATVSSGGDDEVGRMIAEAMDRVSADGVITVEESKSLATELEVTEGMAFDRGYSSPYFVTDADRQICEFENPLILLT 221          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_THEYD (60 kDa chaperonin OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.223e-50
Identity = 110/221 (49.77%), Postives = 150/221 (67.87%), Query Frame = 1
Query:  196 SAKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLD-EFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF-SQTLRNYC*I*NARVLV 852
            +AK + F   +R ++  G+  ++DAV  TLGPRGRNVV++ +FGSP V  DGVT+A+ I+L +P EN GA L+REVASKT+D AGDGTTTA+VLA  I K GL  V++GAN + LKRGIDK V  +VEEL+K ++P+  + +I  V TISA ND  IG +IA+A+DKVG DGV+++              GM+  +GYISP F +   R  C + +A VL+
Sbjct:    2 AAKQLIFGDAARQSILKGVTLLTDAVKATLGPRGRNVVIERKFGSPNVTKDGVTVAKEIDLKEPFENMGAQLVREVASKTSDVAGDGTTTATVLAYAIYKEGLKYVSAGANSMDLKRGIDKAVEAVVEELKKISKPVVDKKEIAQVGTISANNDVSIGELIAEAMDKVGKDGVITVEEAKGMATTLDIVEGMQFDRGYISPYFITDPERLECILEDAFVLI 222          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_SOLUE (60 kDa chaperonin OS=Solibacter usitatus (strain Ellin6076) GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.223e-50
Identity = 102/202 (50.50%), Postives = 144/202 (71.29%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF 801
            AK I + + SR A+  G+++++DAV +TLGP+GRNVVL++ FG P +  DGVT+A+ IEL DP+EN GA ++REVASKT+D AGDGTTTA++LA+ I + G+ +V +GANP++LKRGIDK V    EE++K ++P+ G D I  V TISA +D  IG +IADA+ KVG DGV+++              GM+  +GY+SP F
Sbjct:    2 AKQIVYSEASRQAILRGVNQLADAVKVTLGPKGRNVVLEKKFGGPTITKDGVTVAKEIELKDPLENMGAQMVREVASKTSDVAGDGTTTATILAQSIYREGVKAVAAGANPMALKRGIDKAVELATEEVKKLSKPVSG-DMIAQVGTISANSDKTIGNIIADAMKKVGKDGVITVEESKTMVTELDTVEGMQFDRGYLSPYF 202          
The following BLAST results are available for this feature:
BLAST of EY659680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_SULMW9.363e-5150.7460 kDa chaperonin OS=Sulcia muelleri (strain GWSS)... [more]
CH60_PELLD9.363e-5150.7460 kDa chaperonin OS=Pelodictyon luteolum (strain ... [more]
CH60_EXIS29.363e-5148.4660 kDa chaperonin OS=Exiguobacterium sibiricum (st... [more]
CH60_CLOTH9.363e-5147.1460 kDa chaperonin OS=Clostridium thermocellum (str... [more]
CH60_CAMLR9.363e-5148.5160 kDa chaperonin OS=Campylobacter lari (strain RM... [more]
CH60_CAMHC9.363e-5148.5160 kDa chaperonin OS=Campylobacter hominis (strain... [more]
CH60_BACLD9.363e-5148.4660 kDa chaperonin OS=Bacillus licheniformis (strai... [more]
CH602_SYNPX9.363e-5147.5160 kDa chaperonin 2 OS=Synechococcus sp. (strain W... [more]
CH60_THEYD1.223e-5049.7760 kDa chaperonin OS=Thermodesulfovibrio yellowsto... [more]
CH60_SOLUE1.223e-5050.5060 kDa chaperonin OS=Solibacter usitatus (strain E... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-H09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659680 ID=EY659680; Name=EY659680; organism=Citrus sinensis; type=EST; length=883bp
ACTTGTTGGTACCTTATCCGAAACATTTCCCTCAGCAGACCCTTTACTCC
GTTTGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTT
CCATTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAG
AATCAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGC
CAAAGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCA
TCGATAAGGTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGA
AATGTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGT
AACAATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTG
CTGCTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGAT
GGAACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACT
CCTGAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTG
ATAAAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAAGGCCAGGCCT
ATCGAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAA
TGATGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAAGTTGGTC
CTGATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAAACTACTGNT
GAAAGTGAGGAAGGAATGGAGATNNGACAGGGGTACATCTCTCCTCAGTT
TTCACAAACCCTGAGAAATTATTGTTGAATTTGAAATGCTAGAGTGCTGG
TCACGATCAAAAATTTCTGCAATAAGGAATATT
back to top