EY659641

Overview
NameEY659641
Unique NameEY659641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length986
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659641_ssr332 microsatellite EY659641_ssr332:332..343. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.816e-35
Identity = 80/187 (42.78%), Postives = 108/187 (57.75%), Query Frame = 2
Query:  281 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFM 838
            F  ++  TW+  H++ + GG  + LVLD+ +G GF SK  YLFG  SM IK+V GDSAGTVTAFY++S      DE+DFEFL NRTG PY +QTN++  G G+REQR+NLWFDP       ++    +Q  +F+              G  FP   P   ++      DWAT GG +K +  K PF+
Sbjct:   32 FGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFV 217          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.816e-35
Identity = 85/201 (42.29%), Postives = 109/201 (54.23%), Query Frame = 2
Query:  275 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAP-------------FPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPF 835
            A F  D ++TW D   +    G  + L LD++SG GF SK +YLFG+VSM++KLVPG+SAGTVT  Y+ S      DE+DFEFL N +G PYT+ TN+Y  GKGD+EQ+  LWFDP          + N   Y  LW     Q +  T +G P             FP+  P   ++      DWAT GG  K D SK PF
Sbjct:   21 ANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLKS-PGTTWDEIDFEFLGNSSGEPYTLHTNVYTQGKGDKEQQFKLWFDP----------TANFHTYTILWN---PQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPF 207          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 4.984e-35
Identity = 78/187 (41.71%), Postives = 109/187 (58.29%), Query Frame = 2
Query:  278 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNPGGTQD-WATGGGPKKIDGSKGPF 835
            TF  +F +TW D   + +  G  + L LD+ SG GF +K++YLFG++ M++KLVPG+SAGTVTA+Y+ S  +   DE+DFEFL N TG PYT+ TN+Y  GKGDREQ+ +LWFDP       ++    H   + +      +       G  +P+  P   ++     D WAT GG  K D SK PF
Sbjct:   29 TFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGD-TWDEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPF 214          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 8.502e-35
Identity = 83/193 (43.01%), Postives = 110/193 (56.99%), Query Frame = 2
Query:  281 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHP-------WWGFNPGGTQDWATGGGPKKIDGSKGPFM 838
            F +DF VTWS  H+     GR+  L LDQ SG  F+S + +LFG++ MKIKL+ G S GTV A+YM+S+  N RDE+DFEFL N  G PY +QTN+YA G  +RE+R++LWFDP       ++    HQ  + +             +G  +PR  P       W G      + WAT GG  KID SKGPF+
Sbjct:   37 FNKDFFVTWSPTHVNTSNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSSDQPN-RDEIDFEFLGNVNGQPYILQTNVYAEGLDNREERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMSVQASLWNG------ESWATRGGHDKIDWSKGPFV 222          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.450e-34
Identity = 84/202 (41.58%), Postives = 111/202 (54.95%), Query Frame = 2
Query:  275 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAP-------------FPRTHPWWGF-NPGGTQDWATGGGPKKIDGSKGPFM 838
            A F  D  V W +   + +  G+ + L LD++SG GF SK +YLFG++ M+IKLVPG+SAGTVT FY+ S   +  DE+DFEFL N +G PYT+ TN+Y  GKGD+EQ+ +LWFDP          + N   Y  LW     Q +  T +  P             FP+  P   + +     DWAT GG  K D SK PFM
Sbjct:   22 ADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSE-GSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDP----------TANFHTYSILWN---PQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDWSKAPFM 209          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.450e-34
Identity = 77/186 (41.40%), Postives = 109/186 (58.60%), Query Frame = 2
Query:  281 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPF 835
            F ++++ +W+  H++ + GG    L+LD++SG GF SK+ YLFG  SMK++LV GDSAG VTAFY++SN     DE+DFEFL NRTG PY +QTN++  GKG+REQR+ LWFDP       ++    +    F+              G  FP   P   ++      DWAT GG +K + +  PF
Sbjct:   33 FWKNYEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPF 217          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.894e-34
Identity = 84/201 (41.79%), Postives = 114/201 (56.72%), Query Frame = 2
Query:  278 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAH-----QGLP----KTGE--GAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFMVF 844
            +F E+F +TW +   +   GG+ + L LD+ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++S      DE+DFEFL N TG PY + TN++A GKG+REQ+  LWFDP          + N   Y  +W    H       +P       E  G PFP+  P   ++      DWAT GG  K D SK PF  +
Sbjct:   26 SFNEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEGP-THDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDP----------TKNFHTYSLVWR-PQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAY 214          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 5.511e-34
Identity = 84/201 (41.79%), Postives = 112/201 (55.72%), Query Frame = 2
Query:  278 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAH-----QGLP----KTGE--GAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFMVF 844
            +F +DF +TW     +   GG+ + L LD+ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++S      DE+DFEFL N +G PY + TNI+  GKG+REQ+  LWFDP          + N   Y  +W    H        P    K  E  G PFP+  P   ++      DWAT GG  K D SK PF  +
Sbjct:   31 SFYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGP-THDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDP----------TRNFHTYSIIWK-PQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAY 219          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.400e-34
Identity = 80/191 (41.88%), Postives = 108/191 (56.54%), Query Frame = 2
Query:  281 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFMVFTK 850
            F  ++  TW+  H +Q  GG  +QL+LD+ +G GF SK  YLFG  SM IKL  GD+AG VTAFY+ S+T N  DE+DFEFL NRTG P  +QTN++  GKG+REQR+ LWFDP       ++    +Q  +F+              G  FP   P   ++      DWAT GG +K + +  PF+   K
Sbjct:   35 FGRNYVPTWAFDHQKQFNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYL-SSTNNEHDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYK 224          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.400e-34
Identity = 77/188 (40.96%), Postives = 108/188 (57.45%), Query Frame = 2
Query:  275 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPF 835
            A F  D ++TW D   +    G  + L LD+ SG GF SK +YLFG++ M+IKLV G+SAGTVTA+Y+ S   +  DE+DFEFL N +G PYT+ TN++  GKGDREQ+  LWFDP       ++     +  + + G    +      +G  FP+  P   ++     ++WAT GG  K D SK PF
Sbjct:   24 ANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKS-PGSTWDEIDFEFLGNLSGDPYTLHTNVFTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDWSKAPF 210          
The following BLAST results are available for this feature:
BLAST of EY659641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH5_ARATH3.816e-3542.78Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH22_ARATH3.816e-3542.29Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH25_ARATH4.984e-3541.71Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH10_ARATH8.502e-3543.01Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH1.450e-3441.58Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH1_SOLLC1.450e-3441.40Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH1.894e-3441.79Probable xyloglucan endotransglucosylase/hydrolase... [more]
BRU1_SOYBN5.511e-3441.79Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH4_ARATH9.400e-3441.88Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH23_ARATH9.400e-3440.96Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-E02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659641 ID=EY659641; Name=EY659641; organism=Citrus sinensis; type=EST; length=986bp
TGGTNCGACCAGCCAGTTTCGGTGCCGGNATTCCCGGCCCCGACCCACGC
GTCCGTCTCCCGCGTCTATATAAATACACACTTCCCACAACGCTTCTAAA
CCATACTCAGCATACATAACCACAACATATAATTAAAGATCTCTTTCTAA
TTAGTAACAGATAATATTTTATTGTACGGCTTGTTTTACAGCTATGGCTA
TCCTAAGAAATGCAATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCC
TGCTCTTGCGTTTTAGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGT
CACATGGTCCGATGCCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCC
AGCTAGTTCTAGACCAAAATTCAGGATGTGGGTTTGCCTCCAAAAGGCAG
TACTTGTTCGGGCGTGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTC
TGCTGGAACTGTCACTGCATTTTATATGAATTCCAACACCGAAAATGTGA
GAGACGAGCTTGATTTTGAGTTCCTGAGAAACCGAACGGGGCATCCTTAC
ACGGTCCAAACCAATATCTATGCAAATGGAAAAGGCGATAGAGAACAGAG
AGTGAACCTCTGGTTTGACCCCTGCTGCAGATTATCACCTTGAACACTAT
TCTCTGGAAACCATCAACCATATTGGTTTCTATGGGGATGATGTGCCCAT
CAGGGGTTACCAAAAACAGGGGAAGGGGCTCCTTTTCCAAGAACCCACCC
CTGGTGGGGTTTCAACCCTGGGGGAACCCAAGACTGGGCAACAGGAGGGG
GGCCTAAAAAAATAGATGGGAGCAAAGGCCCTTTTATGGTTTTTACAAAG
ACTCTGATTTGGAGGGGGGCCAAGGTCCTGGACCACAAACTGGGCCTCGA
ACCGTGAACGGTGGGGGGGAAATAATTTAAACCTCCCCCGCTGGGAACAA
AAAAACAAGTGGTGGCCTTAAACCTGATCTTGTTTT
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