EY659641

Overview
NameEY659641
Unique NameEY659641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length986
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659641_ssr332 microsatellite EY659641_ssr332:332..343. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.400e-34
Identity = 75/187 (40.11%), Postives = 104/187 (55.61%), Query Frame = 2
Query:  278 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPF 835
            +F + F +TW        E G+ +   LD+ SG GF SK++YLFG++ MKIKLVPG+SAGTVTA+Y++S  E   DE+DFEFL N TG PY + TN++  GKG+RE +  LWFDP       T+        + + G            G  +P++ P   ++      DWAT GG  K D +  PF
Sbjct:   26 SFYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSKGE-TWDEIDFEFLGNVTGQPYVIHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPF 211          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.228e-33
Identity = 79/187 (42.25%), Postives = 108/187 (57.75%), Query Frame = 2
Query:  281 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFM 838
            F  ++  TW+  H +Q+ GG  +QL+LD+ +G GF SK  YLFG  SM IKL  GD+AG VTAFY+ S+T N  DE+DFEFL NRTG P  +QTN++  GKG+REQR+ LWFDP       ++    +Q  +F+              G  FP   P   ++      DWAT GG +K + +  PF+
Sbjct:   34 FGRNYVPTWAFDHQKQLNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYL-SSTNNEHDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFI 219          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.228e-33
Identity = 78/187 (41.71%), Postives = 105/187 (56.15%), Query Frame = 2
Query:  281 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFM 838
            F +D  +TW D     +  G  + L LDQ+SG GF SK +YL+G+V M+IKLVPG+SAGTVT FY+ S      DE+DFEFL N +G PY V TN+Y  GKGDREQ+  LWFDP       ++        +++ G    +       G  +P+  P   +       DWAT GG  K + S+GPF+
Sbjct:   28 FNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQ-GLTWDEIDFEFLGNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVKTNWSQGPFV 213          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 6.093e-33
Identity = 83/193 (43.01%), Postives = 108/193 (55.96%), Query Frame = 2
Query:  275 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFMVFTK 850
            A F E ++ +W+  H   +  G   +L LD  SG GF S+ +YLFG+VS++IKLV GDSAGTVTAFYM+S+  N  +E DFEFL N TG PY VQTNIY NG G+REQR+NLWFDP       ++        + +             +G PF +      ++      DWAT GG  K D S  PF+   K
Sbjct:   27 AKFDELYRSSWAMDHC--VNEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSSDGPN-HNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWSHAPFVASYK 216          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.957e-33
Identity = 74/193 (38.34%), Postives = 108/193 (55.96%), Query Frame = 2
Query:  278 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGFNP-GGTQDWATGGGPKKIDGSKGPFMVFTKT 853
            +F ++F +TW +     +E G+ +   LD+ SG GF SK++YLFG++ MK+KLV G+SAGTVTA+Y++S  E   DE+DFEFL N TG PY + TN++  GKG+RE +  LWFDP       T+        + + G            G  +P++ P   ++      DWAT GG  K D +  PF    K+
Sbjct:   25 SFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKGE-TWDEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYKS 216          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 5.158e-32
Identity = 73/191 (38.22%), Postives = 110/191 (57.59%), Query Frame = 2
Query:  278 TFLEDFKVTWSDAHLRQIEG-GRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGF-NPGGTQDWATGGGPKKIDGSKGPFMVF 844
            +F +D K+ W D   +  +  G+ + L LD++SG GF S +++L+G+  +++KLVPG+SAGTVT FY+ S      DE+DFEFL N +GHPYT+ TN+Y  G GD+EQ+ +LWFDP        +     +  + + G    + +     G PFP   P   + +    + WAT GG +K D SK PF  +
Sbjct:   23 SFHKDVKIHWGDGRGKIHDNQGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGSGDKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAY 212          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 8.798e-32
Identity = 76/206 (36.89%), Postives = 114/206 (55.34%), Query Frame = 2
Query:  278 TFLEDFKVTWSDAHLRQIEG-GRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGF-NPGGTQDWATGGGPKKIDGSKGPFMVFTK-----TLIWRGAK 874
            +F +D ++ W D   + ++  G  + L LD+ SG GF S +++L+G+V +++KLVPG+SAGTVT FY+ S      DE+DFEFL N +GHPYT+ TN+Y  G GD+EQ+ +LWFDP        +     +  + + G    +       G PFP+  P   + +    + WAT GG +K D SK PF  F +       +W   K
Sbjct:   28 SFHKDVQIHWGDGRGKILDNVGNLLSLSLDKFSGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDACVWSNGK 232          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.149e-31
Identity = 80/205 (39.02%), Postives = 113/205 (55.12%), Query Frame = 2
Query:  275 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGF-NPGGTQDWATGGGPKKIDGSKGPFMV-----FTKTLIWRGA 871
            A F ++F VTW   H+     G  ++LVLD+++G    SK  +LFG V M IKLVPG+SAGTV A+Y++S T +  DE+DFEFL N TG PYT+ TN+YA GKG+REQ+   WF+P       T+     +  WF+ G           EG  +P       F +    +DWAT GG  K + +  PF+        +  +W+G+
Sbjct:   27 ADFSKNFIVTWGKDHM--FMNGTNLRLVLDKSAGSAIKSKVAHLFGSVEMLIKLVPGNSAGTVAAYYLSS-TGSTHDEIDFEFLGNATGQPYTIHTNLYAQGKGNREQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYPNKQGMKVFASLWNAEDWATQGGRVKTNWTLAPFVAEGRRYKARACLWKGS 228          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.501e-31
Identity = 81/216 (37.50%), Postives = 116/216 (53.70%), Query Frame = 2
Query:  278 TFLEDFKVTWSDAHLR-QIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG----*CAHQGLP----KTGE--GAPFPRTHPWWGF-NPGGTQDWATGGGPKKIDGSKGPFMVFTKT-----LIWRGAK 874
            +F +D ++ W D   + +   G+ + L LD++SG GF S +++L+G+  +++KLVPG+SAGTVT FY+ S      DE+DFEFL N +GHPYT+ TN+Y  G GD+EQ+ +LWFDP          + N   Y   W          G+P    K  E  G PFP   P   + +    + WAT GG +K D SK PF  F +       +W   K
Sbjct:   28 SFHKDVQIHWGDGRGKVRDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNLSGHPYTLHTNVYTKGSGDKEQQFHLWFDP----------TVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGK 232          
BLAST of EY659641 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.703e-31
Identity = 75/206 (36.41%), Postives = 112/206 (54.37%), Query Frame = 2
Query:  278 TFLEDFKVTWSDAHLR-QIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLRNRTGHPYTVQTNIYANGKGDREQRVNLWFDPCCRLSP*TLFSGNHQPYWFLWG*CAHQGLPKTGEGAPFPRTHPWWGF-NPGGTQDWATGGGPKKIDGSKGPFMVFTKT-----LIWRGAK 874
            +F +D ++ W D   +     G+ + L LD++SG GF S +++L+G+  +++KLVPG+SAGTVT FY+ S      DE+DFEFL N +GHPYT+ TN+Y  G GD+EQ+ +LWFDP        +     +  + + G    +       G PFP   P   + +    + WAT GG +K D SK PF  F +       +W   K
Sbjct:   28 SFHKDVQIHWGDGRGKIHDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDGCVWANGK 232          
The following BLAST results are available for this feature:
BLAST of EY659641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH12_ARATH9.400e-3440.11Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB1.228e-3342.25Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTH21_ARATH1.228e-3341.71Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH9_ARATH6.093e-3343.01Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH13_ARATH7.957e-3338.34Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH19_ARATH5.158e-3238.22Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH8.798e-3236.89Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH26_ARATH1.149e-3139.02Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH18_ARATH1.501e-3137.50Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH5.703e-3136.41Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-E02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659641 ID=EY659641; Name=EY659641; organism=Citrus sinensis; type=EST; length=986bp
TGGTNCGACCAGCCAGTTTCGGTGCCGGNATTCCCGGCCCCGACCCACGC
GTCCGTCTCCCGCGTCTATATAAATACACACTTCCCACAACGCTTCTAAA
CCATACTCAGCATACATAACCACAACATATAATTAAAGATCTCTTTCTAA
TTAGTAACAGATAATATTTTATTGTACGGCTTGTTTTACAGCTATGGCTA
TCCTAAGAAATGCAATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCC
TGCTCTTGCGTTTTAGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGT
CACATGGTCCGATGCCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCC
AGCTAGTTCTAGACCAAAATTCAGGATGTGGGTTTGCCTCCAAAAGGCAG
TACTTGTTCGGGCGTGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTC
TGCTGGAACTGTCACTGCATTTTATATGAATTCCAACACCGAAAATGTGA
GAGACGAGCTTGATTTTGAGTTCCTGAGAAACCGAACGGGGCATCCTTAC
ACGGTCCAAACCAATATCTATGCAAATGGAAAAGGCGATAGAGAACAGAG
AGTGAACCTCTGGTTTGACCCCTGCTGCAGATTATCACCTTGAACACTAT
TCTCTGGAAACCATCAACCATATTGGTTTCTATGGGGATGATGTGCCCAT
CAGGGGTTACCAAAAACAGGGGAAGGGGCTCCTTTTCCAAGAACCCACCC
CTGGTGGGGTTTCAACCCTGGGGGAACCCAAGACTGGGCAACAGGAGGGG
GGCCTAAAAAAATAGATGGGAGCAAAGGCCCTTTTATGGTTTTTACAAAG
ACTCTGATTTGGAGGGGGGCCAAGGTCCTGGACCACAAACTGGGCCTCGA
ACCGTGAACGGTGGGGGGGAAATAATTTAAACCTCCCCCGCTGGGAACAA
AAAAACAAGTGGTGGCCTTAAACCTGATCTTGTTTT
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