EY659623

Overview
NameEY659623
Unique NameEY659623
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659623 vs. ExPASy Swiss-Prot
Match: LAC25_ORYSJ (Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC25 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.677e-11
Identity = 74/299 (24.75%), Postives = 118/299 (39.46%), Query Frame = 2
Query:    8 FHVQPNNTYTLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSHNYWISAGVRGRKPATPP-----ALTLLNYHPTSASKIPLSPP--PITPRWDDYDHSKSFSNKIFALMGSPKP-----PTNFHRRLT------------LLNTQNTINGFTKWAINNVSLNLPPTPYLGSIKY-----GLKDAFDQNGPPRNFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWV----YGPEREFTKEKRRNL 805
            F V+ N TY LRI            V  H++ VV AD  Y +P++ D + +  G++   L+  +      Y  ++      P  PP     A  +L Y       +   PP  P  P  +D   +  F + + AL+   KP       + H  +T            LL  ++    F+  ++NN S  +P    L    +     G+      + PP  F    D         TT  + V  L  N TV+++LQN   I     E+HP H+HG +F++    +G   +   E+R NL
Sbjct:  213 FEVRQNGTYLLRIINAGMNTPLFFKVAKHRLTVVGADACYTKPYKTDVVVVSPGQTVDALMVASAAVGRYYMAASPYDSAIPQGPPFSDTTATAILQYAGARRKTVRWRPPVLPRRPPVNDTATAHRFFSGMTALLRHGKPSAVPLAVDTHMYVTVGLGVSLCQPEQLLCNRSAPPVFSS-SMNNASFVVPKNTSLLEAHFRREPAGVYTRDFPDTPPVVFDYTGDESDNATMQFTTKSTKVKTLRYNETVEMVLQNTRLI---AKESHPMHIHGFNFFILAQGFGNYDKRRAERRFNL 507          
BLAST of EY659623 vs. ExPASy Swiss-Prot
Match: LAC20_ORYSI (Laccase-20 OS=Oryza sativa subsp. indica GN=LAC20 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.567e-11
Identity = 68/286 (23.78%), Postives = 115/286 (40.21%), Query Frame = 2
Query:    5 IFHVQPNNTYTLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSHNYWISAGVRGRKPATPP-------ALTLLNYHPTSASKIPLS-PPPITPRWDDYDHSKSFSNKIFALMGSP--KPPTNFHRRLTLL--------------NTQNTINGFTKWAINNVSLNLPPTP-----YLGSIKYGLKDAFDQNGPPRNFSNEYDVMKPP-----VNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWV 760
            + +V+   +Y LR+            V  H   VV ADGNY+ PF+ D + +  GE+  VL+  +  P+H + I   V   +P  P        +  L+ Y    A+   L  P PI P   +   S  F   +  LM     + P +   R+ ++                Q ++       +NNVS   P T      Y      G+        PPR ++     + PP     V   T   + +     NT+V++I Q++  +   +S+++P HLHG+D ++
Sbjct:  210 VLNVKHGESYLLRVINTAFFSEYYFKVAGHTFTVVGADGNYLTPFKTDMVTVAPGEAIDVLMVADAPPAHYHMI---VLANQPPEPDPQIPEYISRGLVRYTSADANNNGLPVPMPIMPNQHNTMPSYYFHANLTGLMHPKHRRVPMHVDERIFIILGLGTICRGRKHTCKRQRSLETIELSTMNNVSFTHPYTTALLERYYDGTPEGVYTEDFPVRPPRPYNYTNPALIPPGPLEEVLEPTFKATKLKRFKYNTSVEIIFQSSTLL---MSDSNPMHLHGYDVFL 489          
BLAST of EY659623 vs. ExPASy Swiss-Prot
Match: LAC1_ORYSJ (Putative laccase-1 OS=Oryza sativa subsp. japonica GN=LAC1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.965e-11
Identity = 71/289 (24.57%), Postives = 117/289 (40.48%), Query Frame = 2
Query:   14 VQPNNTYTLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSHN--YWISAGVRGRKPA------TPPALTLLNYHPTSASKIPLSPPP---ITPRWDDYDHSKSFSNKIFALMGSPKP---PTNFHRRLTL--------LNTQNTINGFTKW--------AINNVSLNLPPTPYLGSIKYGL-KDAFDQNGPPRNFSNEYDVMKPP---VNAN----TTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVYG 766
            VQ  NTY LR+            +  H++ VV  D  Y +P  VD + I  G++  VLL  N+    N  Y+++A      P          A  ++ Y  ++ ++ P+ PP    + P   D D + +F  ++ +L     P   P      + +         +  N  N   +         ++NNVS   P    L +  YG  +  +++     NF N+  V+  P   +N      T  G+ V +L   T V+V+ Q+ +       E HP HLHG  F+V G
Sbjct:  215 VQQGNTYLLRVINAGLTNDMFFAIAGHRLTVVGIDARYTKPITVDYIMIAPGQTMDVLLKANRTLGSNSRYYMAARTFITLPVDTIRFNNSTATAIVEYTDSAVAR-PVGPPEFPVLLPAIKDEDAAMAFVKQLRSLGNQDHPVHVPKQVDEHMLIDIDINFLPCDANNATNKLCEGPQGNRFAASLNNVSFQNPAIDVLDAYYYGSGRGVYEE-----NFPNKLTVIVNPTGDINGGGPLLTKRGTKVKVLEYGTVVEVVFQDLSI------ENHPMHLHGFTFYVVG 491          
The following BLAST results are available for this feature:
BLAST of EY659623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
LAC25_ORYSJ2.677e-1124.75Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC20_ORYSI4.567e-1123.78Laccase-20 OS=Oryza sativa subsp. indica GN=LAC20 ... [more]
LAC1_ORYSJ5.965e-1124.57Putative laccase-1 OS=Oryza sativa subsp. japonica... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659623 ID=EY659623; Name=EY659623; organism=Citrus sinensis; type=EST; length=928bp
CCAGATCTTTCATGTTCAACCAAACAATACCTACACGCTCAGGATAGCTA
GTACCACTGCACTCGCTTCACTCAACTTGGCTGTCAAGAATCACAAAATG
GTGGTTGTGGAAGCTGATGGAAATTACGTGCAACCATTTGAAGTAGATGA
CATGGACATATATTCTGGTGAGAGCTATTCGGTCTTATTAACAACAAATC
AAGATCCCTCCCATAATTACTGGATCTCAGCTGGTGTTAGGGGAAGAAAA
CCTGCAACCCCTCCGGCCCTAACACTCTTAAACTATCATCCCACTTCTGC
TTCCAAAATCCCTCTCTCCCCACCACCTATAACTCCTAGATGGGACGACT
ATGATCACAGCAAATCATTCTCCAACAAAATATTTGCCCTAATGGGATCC
CCCAAGCCTCCCACAAATTTCCACCGTCGGCTCACCCTTCTTAACACTCA
AAACACCATTAACGGGTTCACTAAGTGGGCTATTAACAATGTGTCCCTGA
ATTTACCCCCCACTCCTTACTTAGGATCCATCAAATATGGTCTTAAAGAT
GCTTTTGATCAGAATGGTCCCCCCCGAAACTTCTCGAATGAGTATGACGT
GATGAAACCTCCTGTAAACGCTAATACAACTCTTGGAAGTGGGGTTTACA
TGCTTGGGTTAAACACCACAGTTGATGTTATACTTCAAAATGCAAACGCG
ATAAGGCCAAACTTGAGTGAAACCCACCCTTGGCATTTGCATGGGCATGA
TTTTTGGGTTTACGGCCCGGAAAGGGAATTTACCAAAGAGAAGAGAAGAA
ATCTACCTTGAAAATTCCCATTGAAAATACGTGGGGAATTCCCATTGGCG
GGACTGTTTAGATTGGTGTGGTAATCCGGGCGTGGCCTTTCCTGCCTTTG
AGCCCCTTTCATATTGGAAGGGTGGGGT
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