EY659619
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.131e-18 Identity = 70/207 (33.82%), Postives = 96/207 (46.38%), Query Frame = 2 Query: 134 SSRKGS----FVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSD-PEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLA 739 SSR G F A ++ V A+ WF + ++LDGS PGD+GFDPLGL+ PE F E E+ + R+AML G + PE LG + + A G G W + T+ +E + FAE +R + +P EK YPGG F+PLG +KD E+ KL+ +KNGRLA Sbjct: 22 SSRSGRSGLPFCAYATTSGRVTMSAE---WFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKE------SEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAA-LPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTME-KDP-----------EK-------KKYPGG-AFDPLGFSKDPAKFEELKLKEIKNGRLA 198 HSP 2 Score: 31.5722 bits (70), Expect = 1.131e-18 Identity = 15/33 (45.45%), Postives = 20/33 (60.61%), Query Frame = 1 Query: 730 KIGMLAILGYLVQ-GLVTGVGPYQNPLDHLADP 825 ++ MLA +G+ VQ G GP +N HLADP Sbjct: 196 RLAMLAFVGFCVQQSAYPGTGPLENLATHLADP 228
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.694e-18 Identity = 78/222 (35.14%), Postives = 110/222 (49.55%), Query Frame = 2 Query: 164 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 +AST P G DR L+ S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA+D + + K++ +KNGRLA + + + ++ GP Sbjct: 52 SASTSPW-YGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPEN---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGP----------------LGEVTDPIYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 247
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.694e-18 Identity = 78/230 (33.91%), Postives = 111/230 (48.26%), Query Frame = 2 Query: 140 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 RK + + AS+ G DR + S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA D + + K++ +KNGRLA + + + ++ GP Sbjct: 37 RKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FSKNREL---EVIHSRWAMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGP----------------LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.694e-18 Identity = 75/213 (35.21%), Postives = 105/213 (49.30%), Query Frame = 2 Query: 191 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPYTLFV--------LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 G DR + S Q+ SYL+G PGDYG+D GLS DPE F + + L EVI+GR+AMLGA+G I PE+L K + + + WF+ G I G +Y +P + ++ LMG E R PG G G+ YPGG F+PLGLA D + K++ +KNGRLA + + + ++ GP Sbjct: 49 GPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA---FAKNRAL---EVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPV-WFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL--PGV--------------GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.694e-18 Identity = 78/230 (33.91%), Postives = 111/230 (48.26%), Query Frame = 2 Query: 140 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 RK + + AS+ G DR + S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA D + + K++ +KNGRLA + + + ++ GP Sbjct: 38 RKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FSKNREL---EVIHSRWAMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGP----------------LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 242
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.212e-18 Identity = 78/222 (35.14%), Postives = 108/222 (48.65%), Query Frame = 2 Query: 164 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 AAS+ G DR L+ S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA D + D K++ +KNGRLA + + + ++ GP Sbjct: 42 AASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGP----------------LGEVVDPLYPGG-TFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGP 238
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.889e-18 Identity = 74/217 (34.10%), Postives = 108/217 (49.77%), Query Frame = 2 Query: 134 SSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPA-GTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGF----EKYLGGSGDPAYPGGPLFNPLGLA---------KDEKFMEDFKLQAMKNGRLA 739 +SRK VV AA+ P K + +LDGSLPGD+GFDPLGL DP F+ KW E+I+GR+AML +G +G+A T + WF+ G P A +++ TL ++ LMG+ E +R+ D+ +P S ++ + E + +G+ YPGG F+PL LA D +E KL +K+ RLA Sbjct: 43 TSRK--LVVVAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDP----AFL--KWYREAELIHGRWAMLAVLGI----FVGQAW-----TGIPWFEAGADPGAVAPFSFG----TLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLA 238
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.773e-18 Identity = 78/233 (33.48%), Postives = 111/233 (47.64%), Query Frame = 2 Query: 158 VRAASTPPVKQGADRPLWFA----------SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGK-AGLIPQETALAWFQTGV-IPPAGTYNYWADPYTLFV--------LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 + AA+ + G D LW+ S Q+ SYL+G PGDYG+D GLS DPE F + L EVI+GR+AMLGA+G + PE+L K G+ +E WF+ G I G +Y +P + ++ LMG E R G + G G+ YPGG F+PLGLA D + K++ +KNGRLA + + + ++ GP Sbjct: 35 IAAATNGRITMGND--LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA---FARNRAL---EVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPV--WFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRIN--------------GLDGV--GEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 241
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.203e-18 Identity = 70/211 (33.18%), Postives = 91/211 (43.13%), Query Frame = 2 Query: 134 SSRKGSFVVRAASTPPVKQGADRPL--------WFASKQSLSYLDGSLPGDYGFDPLGLSD-PEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLA 739 SS K F A+ PV GA + W + SYLDGS PGD+GFD LGL + P + E E+I+ R+AML G I PE LG + + A G G W T+ +E + F EH+R EK S YPGG F+PLG +KD E+ K++ +KNGRLA Sbjct: 20 SSTKSKF----AAAMPVYVGATNFMSRFSMSADWMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKE------SELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAA-IPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR----------------SMEK---DSEKKKYPGG-AFDPLGYSKDPAKFEELKVKEIKNGRLA 199 HSP 2 Score: 31.9574 bits (71), Expect = 4.203e-18 Identity = 15/33 (45.45%), Postives = 21/33 (63.64%), Query Frame = 1 Query: 730 KIGMLAILGYLVQ-GLVTGVGPYQNPLDHLADP 825 ++ +LAI+G+ VQ G GP +N HLADP Sbjct: 197 RLALLAIVGFCVQQSAYLGTGPLENLATHLADP 229
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.435e-18 Identity = 76/249 (30.52%), Postives = 120/249 (48.19%), Query Frame = 2 Query: 86 TARQILGARSAQFPTGSSRKGSFV-------VRAASTPP---VKQGADRPLWFASKQS------LSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPA-GTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGF----EKYLGGSGDPAYPGGPLFNPLGLA---------KDEKFMEDFKLQAMKNGRLA 739 T+ +L S+ F TG ++ + + V A+TP V A + W + + +LDGSLPGDYGFDPLGL DP F+ KW E+I+GR+AM +G +G+A + + WF+ G P A +++ TL ++ LMG+ E +R+ D+ +P S ++ + E + +G+ YPGG F+PL LA D + +E K+ +K+ RLA Sbjct: 4 TSAAVLNGLSSSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDP----AFL--KWYREAELIHGRWAMAAVLGI----FVGQAW-----SGIPWFEAGADPGAIAPFSFG----TLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLA 233 The following BLAST results are available for this feature:
BLAST of EY659619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659619 ID=EY659619; Name=EY659619; organism=Citrus sinensis; type=EST; length=910bpback to top |